RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 LTBP2Q14767 1821 aa20.77■□□□□ 0.92
SBDSP1-202ENST00000423945 EDNRBP24530 442 aa20.77■□□□□ 0.92
SBDSP1-202ENST00000423945 CST5P28325 142 aaPredicted RBP20.77■□□□□ 0.92
SBDSP1-202ENST00000423945 NKX3-2P78367 333 aa20.77■□□□□ 0.92
SBDSP1-202ENST00000423945 RASEFQ8IZ41 740 aa20.77■□□□□ 0.92
SBDSP1-202ENST00000423945 MTA3Q9BTC8 594 aa20.77■□□□□ 0.92
SBDSP1-202ENST00000423945 MYL10Q9BUA6 226 aa20.77■□□□□ 0.92
SBDSP1-202ENST00000423945 ADD3Q9UEY8 706 aaKnown RBP20.77■□□□□ 0.92
SBDSP1-202ENST00000423945 LOC102724159A0A0B4J2E5 919 aa20.76■□□□□ 0.91
SBDSP1-202ENST00000423945 A0A1W2PQ45 241 aaPredicted RBP20.76■□□□□ 0.91
SBDSP1-202ENST00000423945 A0A1W2PQY0 241 aa20.76■□□□□ 0.91
SBDSP1-202ENST00000423945 ZBTB5O15062 677 aa20.76■□□□□ 0.91
SBDSP1-202ENST00000423945 SMPD1P17405 629 aa20.76■□□□□ 0.91
SBDSP1-202ENST00000423945 MCM5P33992 734 aa20.76■□□□□ 0.91
SBDSP1-202ENST00000423945 ACLYP53396 1101 aa20.76■□□□□ 0.91
SBDSP1-202ENST00000423945 TNFAIP2Q03169 654 aa20.76■□□□□ 0.91
SBDSP1-202ENST00000423945 PWP2Q15269 919 aaKnown RBP20.76■□□□□ 0.91
SBDSP1-202ENST00000423945 KCNA10Q16322 511 aa20.76■□□□□ 0.91
SBDSP1-202ENST00000423945 TRIM60Q495X7 471 aa20.76■□□□□ 0.91
SBDSP1-202ENST00000423945 ZNF654Q8IZM8 581 aa20.76■□□□□ 0.91
SBDSP1-202ENST00000423945 PIGSQ96S52 555 aa20.76■□□□□ 0.91
SBDSP1-202ENST00000423945 TSEN34Q9BSV6 310 aaKnown RBP20.76■□□□□ 0.91
SBDSP1-202ENST00000423945 VTA1Q9NP79 307 aa20.76■□□□□ 0.91
SBDSP1-202ENST00000423945 C6orf222P0C671 652 aaPredicted RBP20.75■□□□□ 0.91
SBDSP1-202ENST00000423945 ADCK5Q3MIX3 580 aa20.75■□□□□ 0.91
SBDSP1-202ENST00000423945 C1orf53Q5VUE5 145 aa20.75■□□□□ 0.91
SBDSP1-202ENST00000423945 CASC1Q6TDU7 716 aa20.75■□□□□ 0.91
SBDSP1-202ENST00000423945 CATIPQ7Z7H3 387 aa20.75■□□□□ 0.91
SBDSP1-202ENST00000423945 SYTL5Q8TDW5 730 aaPredicted RBP20.75■□□□□ 0.91
SBDSP1-202ENST00000423945 TMEM87BQ96K49 555 aa20.75■□□□□ 0.91
SBDSP1-202ENST00000423945 AMNQ9BXJ7 453 aa20.75■□□□□ 0.91
SBDSP1-202ENST00000423945 LRRC2Q9BYS8 371 aa20.75■□□□□ 0.91
SBDSP1-202ENST00000423945 ATP11BQ9Y2G3 1177 aa20.75■□□□□ 0.91
SBDSP1-202ENST00000423945 MAGEA10P43363 369 aaPredicted RBP20.74■□□□□ 0.91
SBDSP1-202ENST00000423945 GHRHRQ02643 423 aa20.74■□□□□ 0.91
SBDSP1-202ENST00000423945 TSGA10IPQ3SY00 556 aa20.74■□□□□ 0.91
SBDSP1-202ENST00000423945 DNERQ8NFT8 737 aa20.74■□□□□ 0.91
SBDSP1-202ENST00000423945 TAAR1Q96RJ0 339 aa20.74■□□□□ 0.91
SBDSP1-202ENST00000423945 MAF1Q9H063 256 aa20.74■□□□□ 0.91
SBDSP1-202ENST00000423945 MRPL11Q9Y3B7 192 aaKnown RBP20.74■□□□□ 0.91
SBDSP1-202ENST00000423945 RBM47A0AV96 593 aaKnown RBP20.73■□□□□ 0.91
SBDSP1-202ENST00000423945 MOXD2PA6NHM9 499 aa20.73■□□□□ 0.91
SBDSP1-202ENST00000423945 DDAH1O94760 285 aa20.73■□□□□ 0.91
SBDSP1-202ENST00000423945 LIFRP42702 1097 aa20.73■□□□□ 0.91
SBDSP1-202ENST00000423945 FXR1P51114 621 aaKnown RBP eCLIP20.73■□□□□ 0.91
SBDSP1-202ENST00000423945 BEX3Q00994 111 aa20.73■□□□□ 0.91
SBDSP1-202ENST00000423945 EXOSC10Q01780 885 aaKnown RBP20.73■□□□□ 0.91
SBDSP1-202ENST00000423945 IQSEC1Q6DN90 963 aa20.73■□□□□ 0.91
SBDSP1-202ENST00000423945 HOMER1Q86YM7 354 aa20.73■□□□□ 0.91
SBDSP1-202ENST00000423945 NUP133Q8WUM0 1156 aa20.73■□□□□ 0.91
SBDSP1-202ENST00000423945 MAP3K14Q99558 947 aa20.73■□□□□ 0.91
SBDSP1-202ENST00000423945 PPP4R2Q9NY27 417 aa20.73■□□□□ 0.91
SBDSP1-202ENST00000423945 KIAA1217Q5T5P2 1943 aa20.72■□□□□ 0.91
SBDSP1-202ENST00000423945 ASGR1P07306 291 aa20.72■□□□□ 0.91
SBDSP1-202ENST00000423945 TLK2Q86UE8 772 aa20.72■□□□□ 0.91
SBDSP1-202ENST00000423945 KCNB2Q92953 911 aa20.72■□□□□ 0.91
SBDSP1-202ENST00000423945 NEK1Q96PY6 1258 aa20.72■□□□□ 0.91
SBDSP1-202ENST00000423945 PCDHA1Q9Y5I3 950 aa20.72■□□□□ 0.91
SBDSP1-202ENST00000423945 LAMA3Q16787 3333 aa20.71■□□□□ 0.91
SBDSP1-202ENST00000423945 PLEKHA8P1O95397 391 aa20.71■□□□□ 0.91
SBDSP1-202ENST00000423945 RXRAP19793 462 aa20.71■□□□□ 0.91
SBDSP1-202ENST00000423945 BMP8BP34820 402 aa20.71■□□□□ 0.91
SBDSP1-202ENST00000423945 HSD17B4P51659 736 aa20.71■□□□□ 0.91
SBDSP1-202ENST00000423945 TLE2Q04725 743 aa20.71■□□□□ 0.91
SBDSP1-202ENST00000423945 GNASQ5JWF2 1037 aa20.71■□□□□ 0.91
SBDSP1-202ENST00000423945 RNF20Q5VTR2 975 aa20.71■□□□□ 0.91
SBDSP1-202ENST00000423945 SH3RF1Q7Z6J0 888 aa20.71■□□□□ 0.91
SBDSP1-202ENST00000423945 SGMS1Q86VZ5 419 aa20.71■□□□□ 0.91
SBDSP1-202ENST00000423945 MCF2L2Q86YR7 1114 aa20.71■□□□□ 0.91
SBDSP1-202ENST00000423945 RAB11FIP4Q86YS3 637 aa20.71■□□□□ 0.91
SBDSP1-202ENST00000423945 TCEANC2Q96MN5 208 aa20.71■□□□□ 0.91
SBDSP1-202ENST00000423945 PDLIM7Q9NR12 457 aa20.71■□□□□ 0.91
SBDSP1-202ENST00000423945 PNMA6FA0A0J9YX94 578 aa20.7■□□□□ 0.9
SBDSP1-202ENST00000423945 DYNC1LI2O43237 492 aaPredicted RBP20.7■□□□□ 0.9
SBDSP1-202ENST00000423945 CFBP00751 764 aa20.7■□□□□ 0.9
SBDSP1-202ENST00000423945 PDE4DQ08499 809 aa20.7■□□□□ 0.9
SBDSP1-202ENST00000423945 DUSP28Q4G0W2 176 aa20.7■□□□□ 0.9
SBDSP1-202ENST00000423945 NFXL1Q6ZNB6 911 aa20.7■□□□□ 0.9
SBDSP1-202ENST00000423945 NOL8Q76FK4 1167 aaKnown RBP20.7■□□□□ 0.9
SBDSP1-202ENST00000423945 TMTC2Q8N394 836 aa20.7■□□□□ 0.9
SBDSP1-202ENST00000423945 SRBD1Q8N5C6 995 aaKnown RBP20.7■□□□□ 0.9
SBDSP1-202ENST00000423945 PCSK9Q8NBP7 692 aaKnown RBP20.7■□□□□ 0.9
SBDSP1-202ENST00000423945 SPZ1Q9BXG8 430 aa20.7■□□□□ 0.9
SBDSP1-202ENST00000423945 WDR11Q9BZH6 1224 aa20.7■□□□□ 0.9
SBDSP1-202ENST00000423945 SPC25Q9HBM1 224 aa20.7■□□□□ 0.9
SBDSP1-202ENST00000423945 STARD7Q9NQZ5 370 aa20.7■□□□□ 0.9
SBDSP1-202ENST00000423945 Q9Y3F1 56 aa20.7■□□□□ 0.9
SBDSP1-202ENST00000423945 TRIM43BA6NCK2 446 aa20.69■□□□□ 0.9
SBDSP1-202ENST00000423945 CCDC69A6NI79 296 aa20.69■□□□□ 0.9
SBDSP1-202ENST00000423945 ARIH2O95376 493 aa20.69■□□□□ 0.9
SBDSP1-202ENST00000423945 MDM2Q00987 491 aaPredicted RBP20.69■□□□□ 0.9
SBDSP1-202ENST00000423945 ERICH6BQ5W0A0 696 aa20.69■□□□□ 0.9
SBDSP1-202ENST00000423945 CTCFLQ8NI51 663 aaPredicted RBP20.69■□□□□ 0.9
SBDSP1-202ENST00000423945 PIBF1Q8WXW3 757 aa20.69■□□□□ 0.9
SBDSP1-202ENST00000423945 TRIM43Q96BQ3 446 aaPredicted RBP20.69■□□□□ 0.9
SBDSP1-202ENST00000423945 RMDN3Q96TC7 470 aa20.69■□□□□ 0.9
SBDSP1-202ENST00000423945 HSPA4P34932 840 aa20.68■□□□□ 0.9
SBDSP1-202ENST00000423945 CDK7P50613 346 aa20.68■□□□□ 0.9
SBDSP1-202ENST00000423945 FSCN1Q16658 493 aaKnown RBP20.68■□□□□ 0.9
SBDSP1-202ENST00000423945 DHX32Q7L7V1 743 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms