RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 CYP2C18P33260 490 aa18.98■□□□□ 0.63
COL18A1-205ENST00000423214 AAMPQ13685 434 aa18.98■□□□□ 0.63
COL18A1-205ENST00000423214 SLC30A10Q6XR72 485 aa18.98■□□□□ 0.63
COL18A1-205ENST00000423214 TIFAQ96CG3 184 aa18.98■□□□□ 0.63
COL18A1-205ENST00000423214 PURBQ96QR8 312 aaKnown RBP18.98■□□□□ 0.63
COL18A1-205ENST00000423214 COL25A1Q9BXS0 654 aaPredicted RBP18.98■□□□□ 0.63
COL18A1-205ENST00000423214 SEZ6LQ9BYH1 1024 aa18.98■□□□□ 0.63
COL18A1-205ENST00000423214 MYH7BA7E2Y1 1941 aa18.98■□□□□ 0.63
COL18A1-205ENST00000423214 LOC102724159A0A0B4J2E5 919 aa18.97■□□□□ 0.63
COL18A1-205ENST00000423214 ACRP10323 421 aa18.97■□□□□ 0.63
COL18A1-205ENST00000423214 ZNF543Q08ER8 600 aa18.97■□□□□ 0.63
COL18A1-205ENST00000423214 PWP2Q15269 919 aaKnown RBP18.97■□□□□ 0.63
COL18A1-205ENST00000423214 B4GALNT3Q6L9W6 998 aa18.97■□□□□ 0.63
COL18A1-205ENST00000423214 TBC1D10CQ8IV04 446 aa18.97■□□□□ 0.63
COL18A1-205ENST00000423214 SLC43A3Q8NBI5 491 aa18.97■□□□□ 0.63
COL18A1-205ENST00000423214 MORC4Q8TE76 937 aa18.97■□□□□ 0.63
COL18A1-205ENST00000423214 ESR2Q92731 530 aa18.97■□□□□ 0.63
COL18A1-205ENST00000423214 IL23AQ9NPF7 189 aa18.97■□□□□ 0.63
COL18A1-205ENST00000423214 NEDD4P46934 1319 aa18.97■□□□□ 0.63
COL18A1-205ENST00000423214 RAD50Q92878 1312 aa18.97■□□□□ 0.63
COL18A1-205ENST00000423214 TRIP12Q14669 1992 aaPredicted RBP18.96■□□□□ 0.63
COL18A1-205ENST00000423214 DUSP28Q4G0W2 176 aa18.96■□□□□ 0.63
COL18A1-205ENST00000423214 RNF207Q6ZRF8 634 aa18.96■□□□□ 0.63
COL18A1-205ENST00000423214 ZNF365Q70YC5 407 aa18.96■□□□□ 0.63
COL18A1-205ENST00000423214 TTC14Q96N46 770 aa18.96■□□□□ 0.63
COL18A1-205ENST00000423214 WDR11Q9BZH6 1224 aa18.96■□□□□ 0.63
COL18A1-205ENST00000423214 RWDD1Q9H446 243 aaPredicted RBP18.96■□□□□ 0.63
COL18A1-205ENST00000423214 ZNF576Q9H609 170 aa18.96■□□□□ 0.63
COL18A1-205ENST00000423214 DIAPH3Q9NSV4 1193 aa18.96■□□□□ 0.63
COL18A1-205ENST00000423214 POLR3EQ9NVU0 708 aa18.96■□□□□ 0.63
COL18A1-205ENST00000423214 WDR19Q8NEZ3 1342 aa18.96■□□□□ 0.63
COL18A1-205ENST00000423214 B4GALT4O60513 344 aa18.95■□□□□ 0.62
COL18A1-205ENST00000423214 SDSP20132 328 aa18.95■□□□□ 0.62
COL18A1-205ENST00000423214 CPT1AP50416 773 aa18.95■□□□□ 0.62
COL18A1-205ENST00000423214 PSMC6P62333 389 aa18.95■□□□□ 0.62
COL18A1-205ENST00000423214 PDE4DQ08499 809 aa18.95■□□□□ 0.62
COL18A1-205ENST00000423214 PPP2R5BQ15173 497 aa18.95■□□□□ 0.62
COL18A1-205ENST00000423214 GPATCH4Q5T3I0 446 aaKnown RBP18.95■□□□□ 0.62
COL18A1-205ENST00000423214 OR6J1Q8NGC5 347 aa18.95■□□□□ 0.62
COL18A1-205ENST00000423214 VCANP13611 3396 aa18.95■□□□□ 0.62
COL18A1-205ENST00000423214 ZNF213O14771 459 aa18.94■□□□□ 0.62
COL18A1-205ENST00000423214 GRIN2CQ14957 1233 aa18.94■□□□□ 0.62
COL18A1-205ENST00000423214 USH1GQ495M9 461 aa18.94■□□□□ 0.62
COL18A1-205ENST00000423214 BRDTQ58F21 947 aaPredicted RBP18.94■□□□□ 0.62
COL18A1-205ENST00000423214 TMEM63BQ5T3F8 832 aa18.94■□□□□ 0.62
COL18A1-205ENST00000423214 C16orf59Q7L2K0 433 aa18.94■□□□□ 0.62
COL18A1-205ENST00000423214 IQCA1Q86XH1 822 aa18.94■□□□□ 0.62
COL18A1-205ENST00000423214 SMC5Q8IY18 1101 aa18.94■□□□□ 0.62
COL18A1-205ENST00000423214 GAS2L1Q99501 681 aaPredicted RBP18.94■□□□□ 0.62
COL18A1-205ENST00000423214 ZKSCAN3Q9BRR0 538 aa18.94■□□□□ 0.62
COL18A1-205ENST00000423214 PBX4Q9BYU1 374 aa18.94■□□□□ 0.62
COL18A1-205ENST00000423214 GPHNQ9NQX3 736 aaPredicted RBP18.94■□□□□ 0.62
COL18A1-205ENST00000423214 UMODL1Q5DID0 1318 aa18.94■□□□□ 0.62
COL18A1-205ENST00000423214 GRXCR1A8MXD5 290 aa18.93■□□□□ 0.62
COL18A1-205ENST00000423214 B4DLN1 442 aa18.93■□□□□ 0.62
COL18A1-205ENST00000423214 MYL3P08590 195 aa18.93■□□□□ 0.62
COL18A1-205ENST00000423214 SNHG28P0DPA3 235 aa18.93■□□□□ 0.62
COL18A1-205ENST00000423214 NT5C2P49902 561 aa18.93■□□□□ 0.62
COL18A1-205ENST00000423214 MRPL12P52815 198 aaKnown RBP18.93■□□□□ 0.62
COL18A1-205ENST00000423214 CCL23P55773 120 aa18.93■□□□□ 0.62
COL18A1-205ENST00000423214 RPS6P62753 249 aaKnown RBP18.93■□□□□ 0.62
COL18A1-205ENST00000423214 RAB30Q15771 203 aa18.93■□□□□ 0.62
COL18A1-205ENST00000423214 CCDC178Q5BJE1 867 aa18.93■□□□□ 0.62
COL18A1-205ENST00000423214 RASIP1Q5U651 963 aa18.93■□□□□ 0.62
COL18A1-205ENST00000423214 CHD1LQ86WJ1 897 aa18.93■□□□□ 0.62
COL18A1-205ENST00000423214 DNERQ8NFT8 737 aa18.93■□□□□ 0.62
COL18A1-205ENST00000423214 CLEC4DQ8WXI8 215 aa18.93■□□□□ 0.62
COL18A1-205ENST00000423214 NOC4LQ9BVI4 516 aaKnown RBP18.93■□□□□ 0.62
COL18A1-205ENST00000423214 TRPV6Q9H1D0 765 aa18.93■□□□□ 0.62
COL18A1-205ENST00000423214 GRIN2DO15399 1336 aa18.93■□□□□ 0.62
COL18A1-205ENST00000423214 HIP1O00291 1037 aa18.92■□□□□ 0.62
COL18A1-205ENST00000423214 NKRFO15226 690 aaKnown RBP eCLIP18.92■□□□□ 0.62
COL18A1-205ENST00000423214 FGBP02675 491 aa18.92■□□□□ 0.62
COL18A1-205ENST00000423214 GOLGA8HP0CJ92 632 aa18.92■□□□□ 0.62
COL18A1-205ENST00000423214 PBX2P40425 430 aa18.92■□□□□ 0.62
COL18A1-205ENST00000423214 CWC27Q6UX04 472 aaKnown RBP18.92■□□□□ 0.62
COL18A1-205ENST00000423214 PNMA1Q8ND90 353 aa18.92■□□□□ 0.62
COL18A1-205ENST00000423214 SCFD2Q8WU76 684 aa18.92■□□□□ 0.62
COL18A1-205ENST00000423214 HERVK_113Q902F9 699 aa18.92■□□□□ 0.62
COL18A1-205ENST00000423214 ALDH8A1Q9H2A2 487 aaPredicted RBP18.92■□□□□ 0.62
COL18A1-205ENST00000423214 KAT14Q9H8E8 782 aa18.92■□□□□ 0.62
COL18A1-205ENST00000423214 MSRAQ9UJ68 235 aa18.92■□□□□ 0.62
COL18A1-205ENST00000423214 RBM47A0AV96 593 aaKnown RBP18.91■□□□□ 0.62
COL18A1-205ENST00000423214 KDM4AO75164 1064 aa18.91■□□□□ 0.62
COL18A1-205ENST00000423214 SUPT20HL2P0C7V6 817 aa18.91■□□□□ 0.62
COL18A1-205ENST00000423214 PURAQ00577 322 aaKnown RBP18.91■□□□□ 0.62
COL18A1-205ENST00000423214 FAM47CQ5HY64 1035 aa18.91■□□□□ 0.62
COL18A1-205ENST00000423214 OTOP2Q7RTS6 562 aa18.91■□□□□ 0.62
COL18A1-205ENST00000423214 DGKHQ86XP1 1220 aa18.91■□□□□ 0.62
COL18A1-205ENST00000423214 PLEKHM2Q8IWE5 1019 aa18.91■□□□□ 0.62
COL18A1-205ENST00000423214 EXOC6Q8TAG9 804 aa18.91■□□□□ 0.62
COL18A1-205ENST00000423214 MTG1Q9BT17 334 aaPredicted RBP18.91■□□□□ 0.62
COL18A1-205ENST00000423214 WNT8AQ9H1J5 351 aa18.91■□□□□ 0.62
COL18A1-205ENST00000423214 SUPT16HQ9Y5B9 1047 aaKnown RBP18.91■□□□□ 0.62
COL18A1-205ENST00000423214 CDC37Q16543 378 aaPredicted RBP18.9■□□□□ 0.62
COL18A1-205ENST00000423214 RPUSD2Q8IZ73 545 aaKnown RBP18.9■□□□□ 0.62
COL18A1-205ENST00000423214 OSBPL3Q9H4L5 887 aa18.9■□□□□ 0.62
COL18A1-205ENST00000423214 TNKSO95271 1327 aa18.9■□□□□ 0.62
COL18A1-205ENST00000423214 ZBBXA8MT70 800 aa18.89■□□□□ 0.61
COL18A1-205ENST00000423214 B4E1Z4 1266 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms