RNA–Protein interactions for RNA: ENST00000420222.1

SH3PXD2A-204, Transcript of SH3 and PX domains 2A, humanhuman

TSL 2

Gene SH3PXD2A, Length 3,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-204ENST00000420222 PCDH11YQ9BZA8 1340 aa16.58■□□□□ 0.24
SH3PXD2A-204ENST00000420222 TSPY2A6NKD2 308 aa16.58■□□□□ 0.24
SH3PXD2A-204ENST00000420222 NR1D1P20393 614 aa16.58■□□□□ 0.24
SH3PXD2A-204ENST00000420222 SF3B2Q13435 895 aaKnown RBP16.58■□□□□ 0.24
SH3PXD2A-204ENST00000420222 E2F5Q15329 346 aa16.58■□□□□ 0.24
SH3PXD2A-204ENST00000420222 TMTC3Q6ZXV5 915 aa16.58■□□□□ 0.24
SH3PXD2A-204ENST00000420222 KIF1AQ12756 1690 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 ANO9A1A5B4 782 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 LRRC53A6NM62 1247 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 CYP2D6P10635 497 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 ATF3P18847 181 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 SLC1A4P43007 532 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 NAA35Q5VZE5 725 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 B4GALNT4Q76KP1 1039 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 SH2D4AQ9H788 454 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 STARD3NLO95772 234 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 GNAT2P19087 354 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 PLCG1P19174 1290 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 ATP6V1AP38606 617 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 TROAPQ12815 778 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 NAALADL2Q58DX5 795 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 TTI2Q6NXR4 508 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 DUSP9Q99956 384 aaKnown RBP16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 ZBTB1Q9Y2K1 713 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 CNTNAP5Q8WYK1 1306 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 PDE8AO60658 829 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 FUT2Q10981 343 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 LETM2Q2VYF4 491 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 KIRREL3Q8IZU9 778 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 FNBP4Q8N3X1 1017 aaPredicted RBP16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 P2RX5Q93086 422 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 CCDC114Q96M63 670 aa16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.57■□□□□ 0.24
SH3PXD2A-204ENST00000420222 A0A1W2PQC6 194 aa16.56■□□□□ 0.24
SH3PXD2A-204ENST00000420222 MEFVO15553 781 aaPredicted RBP16.56■□□□□ 0.24
SH3PXD2A-204ENST00000420222 CDR1P51861 262 aa16.56■□□□□ 0.24
SH3PXD2A-204ENST00000420222 EHHADHQ08426 723 aa16.56■□□□□ 0.24
SH3PXD2A-204ENST00000420222 LRRC41Q15345 812 aa16.56■□□□□ 0.24
SH3PXD2A-204ENST00000420222 MTMR8Q96EF0 704 aa16.56■□□□□ 0.24
SH3PXD2A-204ENST00000420222 CEP89Q96ST8 783 aa16.56■□□□□ 0.24
SH3PXD2A-204ENST00000420222 THAP9Q9H5L6 903 aa16.56■□□□□ 0.24
SH3PXD2A-204ENST00000420222 ATRNO75882 1429 aa16.56■□□□□ 0.24
SH3PXD2A-204ENST00000420222 CHD4Q14839 1912 aa16.56■□□□□ 0.24
SH3PXD2A-204ENST00000420222 GOLGA6L7A0A1B0GV03 622 aa16.56■□□□□ 0.24
SH3PXD2A-204ENST00000420222 ZNF233A6NK53 670 aa16.56■□□□□ 0.24
SH3PXD2A-204ENST00000420222 BLIDQ8IZY5 108 aa16.56■□□□□ 0.24
SH3PXD2A-204ENST00000420222 LRRC15Q8TF66 581 aa16.56■□□□□ 0.24
SH3PXD2A-204ENST00000420222 ZNF473Q8WTR7 871 aaKnown RBP16.56■□□□□ 0.24
SH3PXD2A-204ENST00000420222 CCDC47Q96A33 483 aaKnown RBP16.56■□□□□ 0.24
SH3PXD2A-204ENST00000420222 TSGA10Q9BZW7 698 aa16.56■□□□□ 0.24
SH3PXD2A-204ENST00000420222 GOLGA6L10A6NI86 522 aa16.55■□□□□ 0.24
SH3PXD2A-204ENST00000420222 TULP1O00294 542 aaPredicted RBP16.55■□□□□ 0.24
SH3PXD2A-204ENST00000420222 GOLGA8HP0CJ92 632 aa16.55■□□□□ 0.24
SH3PXD2A-204ENST00000420222 CCDC170Q8IYT3 715 aa16.55■□□□□ 0.24
SH3PXD2A-204ENST00000420222 TNFRSF25Q93038 417 aa16.55■□□□□ 0.24
SH3PXD2A-204ENST00000420222 EVA1CP58658 441 aa16.55■□□□□ 0.24
SH3PXD2A-204ENST00000420222 MEA1Q16626 185 aa16.55■□□□□ 0.24
SH3PXD2A-204ENST00000420222 DDX42Q86XP3 938 aaKnown RBP eCLIP16.55■□□□□ 0.24
SH3PXD2A-204ENST00000420222 MMGT1Q8N4V1 131 aa16.55■□□□□ 0.24
SH3PXD2A-204ENST00000420222 SH3GL2Q99962 352 aa16.55■□□□□ 0.24
SH3PXD2A-204ENST00000420222 VAT1LQ9HCJ6 419 aa16.55■□□□□ 0.24
SH3PXD2A-204ENST00000420222 TMOD1P28289 359 aa16.55■□□□□ 0.24
SH3PXD2A-204ENST00000420222 TECP42680 631 aa16.55■□□□□ 0.24
SH3PXD2A-204ENST00000420222 IFT20Q8IY31 132 aa16.55■□□□□ 0.24
SH3PXD2A-204ENST00000420222 STAG2Q8N3U4 1231 aa16.55■□□□□ 0.24
SH3PXD2A-204ENST00000420222 RBM28Q9NW13 759 aaKnown RBP16.55■□□□□ 0.24
SH3PXD2A-204ENST00000420222 USP54Q70EL1 1684 aa16.54■□□□□ 0.24
SH3PXD2A-204ENST00000420222 TCP1P17987 556 aaKnown RBP16.54■□□□□ 0.24
SH3PXD2A-204ENST00000420222 LONP1P36776 959 aaKnown RBP16.54■□□□□ 0.24
SH3PXD2A-204ENST00000420222 EMBQ6PCB8 327 aa16.54■□□□□ 0.24
SH3PXD2A-204ENST00000420222 CCT8L2Q96SF2 557 aa16.54■□□□□ 0.24
SH3PXD2A-204ENST00000420222 NUP58Q9BVL2 599 aa16.54■□□□□ 0.24
SH3PXD2A-204ENST00000420222 PLAAQ9Y263 795 aa16.54■□□□□ 0.24
SH3PXD2A-204ENST00000420222 CABP7Q86V35 215 aa16.54■□□□□ 0.24
SH3PXD2A-204ENST00000420222 PKD1L3Q7Z443 1732 aa16.54■□□□□ 0.24
SH3PXD2A-204ENST00000420222 DDX60Q8IY21 1712 aaKnown RBP16.54■□□□□ 0.24
SH3PXD2A-204ENST00000420222 KLRC4O43908 158 aa16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 CCNT1O60563 726 aaKnown RBP16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 PALMO75781 387 aa16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 CFAP221Q4G0U5 840 aa16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 NLRP14Q86W24 1093 aa16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 DZIP3Q86Y13 1208 aaKnown RBP16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 TTYH3Q9C0H2 523 aa16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 TBC1D7Q9P0N9 293 aa16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 CCDC172P0C7W6 258 aa16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 TXNRD1Q16881 649 aa16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 NOX5Q96PH1 765 aa16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 TCP11L1Q9NUJ3 509 aa16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 ERVV-2B6SEH9 535 aa16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 PPP1R37O75864 691 aa16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 PDHBP11177 359 aa16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 SCP2P22307 547 aa16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 ALS2CLQ60I27 953 aa16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 CCDC121Q6ZUS5 278 aa16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 MICALCLQ6ZW33 695 aa16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 CNPY4Q8N129 248 aa16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 GIMAP8Q8ND71 665 aaPredicted RBP16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 UBLCP1Q8WVY7 318 aaPredicted RBP16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 N4BP2L2Q92802 583 aaPredicted RBP16.53■□□□□ 0.24
SH3PXD2A-204ENST00000420222 TLR10Q9BXR5 811 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms