RNA–Protein interactions for RNA: ENST00000419445.5

PGGT1B-203, Transcript of protein geranylgeranyltransferase type I subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGGT1B, Length 9,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGGT1B-203ENST00000419445 LTBP4Q8N2S1 1624 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 SSU72P8A0A1W2PR75 194 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 RNF40O75150 1001 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 STARD3NLO95772 234 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 ATF3P18847 181 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 TRIM14Q14142 442 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 FAM228AQ86W67 206 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 CCDC170Q8IYT3 715 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 TXLNBQ8N3L3 684 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 ANKLE1Q8NAG6 615 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 NELFBQ8WX92 580 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 RRP36Q96EU6 259 aaKnown RBP4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 LRRC1Q9BTT6 524 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 NEUROG2Q9H2A3 272 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 DNAJC18Q9H819 358 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 FAM204AQ9H8W3 233 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 RSPH14Q9UHP6 348 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 ATP8B3O60423 1300 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 C5orf60A6NFR6 353 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 MYMKA6NI61 221 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 ERVK-9P63128 1117 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 CEP112Q8N8E3 955 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 NEDD1Q8NHV4 660 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 BBXQ8WY36 941 aaPredicted RBP4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 DHTKD1Q96HY7 919 aaPredicted RBP4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 TMEM47Q9BQJ4 181 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 TUBGCP2Q9BSJ2 902 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 VPS16Q9H269 839 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 GDF3Q9NR23 364 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 NR2E1Q9Y466 385 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 FOCADQ5VW36 1801 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 F8W031 263 aaPredicted RBP4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 N4BP3O15049 544 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 KCNQ2O43526 872 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 CYP26C1Q6V0L0 522 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 HDXQ7Z353 690 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 GSPT2Q8IYD1 628 aaKnown RBP4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 BLIDQ8IZY5 108 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 EIF1ADQ8N9N8 165 aaKnown RBP4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 RPGRIP1Q96KN7 1286 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 SELENOOQ9BVL4 669 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 CPVLQ9H3G5 476 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 CNTNAP4Q9C0A0 1308 aa4.07□□□□□ -1.76
PGGT1B-203ENST00000419445 RBBP6Q7Z6E9 1792 aaKnown RBP4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 GGCXP38435 758 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 TDO2P48775 406 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 B3GNT9Q6UX72 402 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 ZNF771Q7L3S4 317 aaPredicted RBP4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 EPM2AIP1Q7L775 607 aaPredicted RBP4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 IRF2BP2Q7Z5L9 587 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 SIAH1Q8IUQ4 282 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 MNS1Q8NEH6 495 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 SCFD2Q8WU76 684 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 GPKOWQ92917 476 aaPredicted RBP eCLIP4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 RBM12Q9NTZ6 932 aaKnown RBP4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 AJAP1Q9UKB5 411 aaPredicted RBP4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 PVALEFA0A1B0GWK0 134 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 PAEPP09466 180 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 MCM6Q14566 821 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 PIK3AP1Q6ZUJ8 805 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 FRMPD4Q14CM0 1322 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 ATXN2Q99700 1313 aaKnown RBP4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 GUCY2CP25092 1073 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 SMARCA1P28370 1054 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 DNM2P50570 870 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 NFIXQ14938 502 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 UBAP2Q5T6F2 1119 aaKnown RBP4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 YTHDF3Q7Z739 585 aaKnown RBP4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 SUGP1Q8IWZ8 645 aaKnown RBP4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 CPLX3Q8WVH0 158 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 SMARCC1Q92922 1105 aaPredicted RBP4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 SAR1BQ9Y6B6 198 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 A0A087X0T9 212 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 FAM228BP0C875 321 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 A1CFQ9NQ94 594 aaKnown RBP4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 BTG4Q9NY30 223 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 PCDHA4Q9UN74 947 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 CTNND2Q9UQB3 1225 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 ATF5Q9Y2D1 282 aaPredicted RBP4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 MYH1P12882 1939 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 CTAGE15A4D2H0 777 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 B4DLN1 442 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 ANKRD65E5RJM6 399 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 SLC37A4O43826 429 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 USP17L8P0C7I0 530 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 RHOXF2BP0C7M4 288 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 CTAGE8P0CG41 777 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 PLCG1P19174 1290 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 CYP7A1P22680 504 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 KRT2P35908 639 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 TPM4P67936 248 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 CTAGE6Q86UF2 777 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 CTAGE4Q8IX94 777 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 P2RX5Q93086 422 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 RHOXF2Q9BQY4 288 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 JPH2Q9BR39 696 aaPredicted RBP4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 STRA6Q9BX79 667 aa4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 ARGLU1Q9NWB6 273 aaPredicted RBP4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 HSPA9P38646 679 aaKnown RBP4.06□□□□□ -1.76
PGGT1B-203ENST00000419445 MAGEA9P43362 315 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms