RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 MCM3APO60318 1980 aa11.07□□□□□ -0.64
NUP50-205ENST00000419387 LOC102724159A0A0B4J2E5 919 aa11.06□□□□□ -0.64
NUP50-205ENST00000419387 A0A0U1RQG5 324 aaPredicted RBP11.06□□□□□ -0.64
NUP50-205ENST00000419387 PTPDC1A2A3K4 754 aa11.06□□□□□ -0.64
NUP50-205ENST00000419387 B4E1Z4 1266 aa11.06□□□□□ -0.64
NUP50-205ENST00000419387 ARVCFO00192 962 aa11.06□□□□□ -0.64
NUP50-205ENST00000419387 NFIBO00712 420 aa11.06□□□□□ -0.64
NUP50-205ENST00000419387 DYNC1LI2O43237 492 aaPredicted RBP11.06□□□□□ -0.64
NUP50-205ENST00000419387 SMPD1P17405 629 aa11.06□□□□□ -0.64
NUP50-205ENST00000419387 BEX3Q00994 111 aa11.06□□□□□ -0.64
NUP50-205ENST00000419387 PWP2Q15269 919 aaKnown RBP11.06□□□□□ -0.64
NUP50-205ENST00000419387 FAM109BQ6ICB4 259 aaPredicted RBP11.06□□□□□ -0.64
NUP50-205ENST00000419387 EEPD1Q7L9B9 569 aa11.06□□□□□ -0.64
NUP50-205ENST00000419387 FBXO16Q8IX29 292 aaPredicted RBP11.06□□□□□ -0.64
NUP50-205ENST00000419387 PNMA1Q8ND90 353 aa11.06□□□□□ -0.64
NUP50-205ENST00000419387 CLEC4DQ8WXI8 215 aa11.06□□□□□ -0.64
NUP50-205ENST00000419387 ZSCAN10Q96SZ4 725 aaPredicted RBP11.06□□□□□ -0.64
NUP50-205ENST00000419387 AP5M1Q9H0R1 490 aa11.06□□□□□ -0.64
NUP50-205ENST00000419387 KAT14Q9H8E8 782 aa11.06□□□□□ -0.64
NUP50-205ENST00000419387 VTA1Q9NP79 307 aa11.06□□□□□ -0.64
NUP50-205ENST00000419387 PDGFCQ9NRA1 345 aa11.06□□□□□ -0.64
NUP50-205ENST00000419387 MTMR10Q9NXD2 777 aa11.06□□□□□ -0.64
NUP50-205ENST00000419387 ZSWIM5Q9P217 1185 aa11.06□□□□□ -0.64
NUP50-205ENST00000419387 Q9Y3F1 56 aa11.06□□□□□ -0.64
NUP50-205ENST00000419387 DNAH12Q6ZR08 3092 aa11.06□□□□□ -0.64
NUP50-205ENST00000419387 WDR19Q8NEZ3 1342 aa11.06□□□□□ -0.64
NUP50-205ENST00000419387 LAMA3Q16787 3333 aa11.06□□□□□ -0.64
NUP50-205ENST00000419387 LTBP2Q14767 1821 aa11.05□□□□□ -0.64
NUP50-205ENST00000419387 ZEB2O60315 1214 aa11.05□□□□□ -0.64
NUP50-205ENST00000419387 CABYRO75952 493 aa11.05□□□□□ -0.64
NUP50-205ENST00000419387 GOLGA8HP0CJ92 632 aa11.05□□□□□ -0.64
NUP50-205ENST00000419387 GSPT1P15170 499 aaKnown RBP11.05□□□□□ -0.64
NUP50-205ENST00000419387 ALDH5A1P51649 535 aaPredicted RBP11.05□□□□□ -0.64
NUP50-205ENST00000419387 FPGSQ05932 587 aa11.05□□□□□ -0.64
NUP50-205ENST00000419387 TTC22Q5TAA0 569 aa11.05□□□□□ -0.64
NUP50-205ENST00000419387 RNF207Q6ZRF8 634 aa11.05□□□□□ -0.64
NUP50-205ENST00000419387 KIAA1211Q6ZU35 1233 aa11.05□□□□□ -0.64
NUP50-205ENST00000419387 TLK2Q86UE8 772 aa11.05□□□□□ -0.64
NUP50-205ENST00000419387 KRT23Q9C075 422 aa11.05□□□□□ -0.64
NUP50-205ENST00000419387 UBA5Q9GZZ9 404 aa11.05□□□□□ -0.64
NUP50-205ENST00000419387 IL25Q9H293 177 aa11.05□□□□□ -0.64
NUP50-205ENST00000419387 CNNM2Q9H8M5 875 aa11.05□□□□□ -0.64
NUP50-205ENST00000419387 TLR3O15455 904 aaKnown RBP11.04□□□□□ -0.64
NUP50-205ENST00000419387 TIMP1P01033 207 aa11.04□□□□□ -0.64
NUP50-205ENST00000419387 PTGS1P23219 599 aa11.04□□□□□ -0.64
NUP50-205ENST00000419387 CALML3P27482 149 aa11.04□□□□□ -0.64
NUP50-205ENST00000419387 EPHB4P54760 987 aa11.04□□□□□ -0.64
NUP50-205ENST00000419387 RPS6P62753 249 aaKnown RBP11.04□□□□□ -0.64
NUP50-205ENST00000419387 FSCN1Q16658 493 aaKnown RBP11.04□□□□□ -0.64
NUP50-205ENST00000419387 DUSP28Q4G0W2 176 aa11.04□□□□□ -0.64
NUP50-205ENST00000419387 TMEM63BQ5T3F8 832 aa11.04□□□□□ -0.64
NUP50-205ENST00000419387 CXCL17Q6UXB2 119 aa11.04□□□□□ -0.64
NUP50-205ENST00000419387 SLC30A10Q6XR72 485 aa11.04□□□□□ -0.64
NUP50-205ENST00000419387 ADGRF4Q8IZF3 695 aa11.04□□□□□ -0.64
NUP50-205ENST00000419387 ENAHQ8N8S7 591 aaPredicted RBP11.04□□□□□ -0.64
NUP50-205ENST00000419387 RGS22Q8NE09 1264 aa11.04□□□□□ -0.64
NUP50-205ENST00000419387 DNERQ8NFT8 737 aa11.04□□□□□ -0.64
NUP50-205ENST00000419387 RUFY2Q8WXA3 655 aa11.04□□□□□ -0.64
NUP50-205ENST00000419387 CPVLQ9H3G5 476 aa11.04□□□□□ -0.64
NUP50-205ENST00000419387 BMP2KQ9NSY1 1161 aaPredicted RBP11.04□□□□□ -0.64
NUP50-205ENST00000419387 TBX21Q9UL17 535 aa11.04□□□□□ -0.64
NUP50-205ENST00000419387 STXBP5LQ9Y2K9 1186 aa11.04□□□□□ -0.64
NUP50-205ENST00000419387 TNKSO95271 1327 aa11.04□□□□□ -0.64
NUP50-205ENST00000419387 RBM47A0AV96 593 aaKnown RBP11.03□□□□□ -0.64
NUP50-205ENST00000419387 TIE1P35590 1138 aa11.03□□□□□ -0.64
NUP50-205ENST00000419387 SMAD3P84022 425 aaKnown RBP11.03□□□□□ -0.64
NUP50-205ENST00000419387 CDC37Q16543 378 aaPredicted RBP11.03□□□□□ -0.64
NUP50-205ENST00000419387 USH1GQ495M9 461 aa11.03□□□□□ -0.64
NUP50-205ENST00000419387 ASPRV1Q53RT3 343 aa11.03□□□□□ -0.64
NUP50-205ENST00000419387 MFSD5Q6N075 450 aa11.03□□□□□ -0.64
NUP50-205ENST00000419387 FAM126BQ8IXS8 530 aa11.03□□□□□ -0.64
NUP50-205ENST00000419387 SLC43A3Q8NBI5 491 aa11.03□□□□□ -0.64
NUP50-205ENST00000419387 SLC17A8Q8NDX2 589 aa11.03□□□□□ -0.64
NUP50-205ENST00000419387 RNPC3Q96LT9 517 aaKnown RBP11.03□□□□□ -0.64
NUP50-205ENST00000419387 MPHOSPH6Q99547 160 aaKnown RBP11.03□□□□□ -0.64
NUP50-205ENST00000419387 UBAC1Q9BSL1 405 aa11.03□□□□□ -0.64
NUP50-205ENST00000419387 SEZ6LQ9BYH1 1024 aa11.03□□□□□ -0.64
NUP50-205ENST00000419387 WDR11Q9BZH6 1224 aa11.03□□□□□ -0.64
NUP50-205ENST00000419387 MAF1Q9H063 256 aa11.03□□□□□ -0.64
NUP50-205ENST00000419387 RAD50Q92878 1312 aa11.03□□□□□ -0.64
NUP50-205ENST00000419387 B4DLN1 442 aa11.02□□□□□ -0.65
NUP50-205ENST00000419387 MAP3K13O43283 966 aa11.02□□□□□ -0.65
NUP50-205ENST00000419387 CD4P01730 458 aa11.02□□□□□ -0.65
NUP50-205ENST00000419387 PARP1P09874 1014 aaKnown RBP11.02□□□□□ -0.65
NUP50-205ENST00000419387 EDNRBP24530 442 aa11.02□□□□□ -0.65
NUP50-205ENST00000419387 CHMLP26374 656 aa11.02□□□□□ -0.65
NUP50-205ENST00000419387 MRPL12P52815 198 aaKnown RBP11.02□□□□□ -0.65
NUP50-205ENST00000419387 PDE4DQ08499 809 aa11.02□□□□□ -0.65
NUP50-205ENST00000419387 ITGA7Q13683 1181 aa11.02□□□□□ -0.65
NUP50-205ENST00000419387 IFIT1BQ5T764 474 aaKnown RBP11.02□□□□□ -0.65
NUP50-205ENST00000419387 ZNF697Q5TEC3 545 aa11.02□□□□□ -0.65
NUP50-205ENST00000419387 VAT1LQ9HCJ6 419 aa11.02□□□□□ -0.65
NUP50-205ENST00000419387 GRIN2DO15399 1336 aa11.02□□□□□ -0.65
NUP50-205ENST00000419387 ABCB11O95342 1321 aa11.02□□□□□ -0.65
NUP50-205ENST00000419387 LCTP09848 1927 aa11.01□□□□□ -0.65
NUP50-205ENST00000419387 LAMA4Q16363 1823 aa11.01□□□□□ -0.65
NUP50-205ENST00000419387 NKRFO15226 690 aaKnown RBP eCLIP11.01□□□□□ -0.65
NUP50-205ENST00000419387 DHX16O60231 1041 aaKnown RBP11.01□□□□□ -0.65
NUP50-205ENST00000419387 PTH1RQ03431 593 aa11.01□□□□□ -0.65
NUP50-205ENST00000419387 TRDNQ13061 729 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms