RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 WDR11Q9BZH6 1224 aa18.34■□□□□ 0.53
SBDSP1-201ENST00000415772 ANAPC4Q9UJX5 808 aa18.34■□□□□ 0.53
SBDSP1-201ENST00000415772 DDX49Q9Y6V7 483 aaKnown RBP18.34■□□□□ 0.53
SBDSP1-201ENST00000415772 CUL9Q8IWT3 2517 aa18.33■□□□□ 0.53
SBDSP1-201ENST00000415772 LRRC37A2A6NM11 1700 aa18.33■□□□□ 0.52
SBDSP1-201ENST00000415772 TNFRSF10AO00220 468 aa18.33■□□□□ 0.52
SBDSP1-201ENST00000415772 ORC4O43929 436 aa18.33■□□□□ 0.52
SBDSP1-201ENST00000415772 ACTN1P12814 892 aa18.33■□□□□ 0.52
SBDSP1-201ENST00000415772 DUSP28Q4G0W2 176 aa18.33■□□□□ 0.52
SBDSP1-201ENST00000415772 PPP2R2DQ66LE6 453 aa18.33■□□□□ 0.52
SBDSP1-201ENST00000415772 RASGRP2Q7LDG7 609 aa18.33■□□□□ 0.52
SBDSP1-201ENST00000415772 MICALL1Q8N3F8 863 aa18.33■□□□□ 0.52
SBDSP1-201ENST00000415772 RANBP17Q9H2T7 1088 aaKnown RBP18.33■□□□□ 0.52
SBDSP1-201ENST00000415772 HELLSQ9NRZ9 838 aa18.33■□□□□ 0.52
SBDSP1-201ENST00000415772 CXXC1Q9P0U4 656 aaPredicted RBP18.33■□□□□ 0.52
SBDSP1-201ENST00000415772 LOC102724159A0A0B4J2E5 919 aa18.32■□□□□ 0.52
SBDSP1-201ENST00000415772 RRP1P56182 461 aaKnown RBP18.32■□□□□ 0.52
SBDSP1-201ENST00000415772 PWP2Q15269 919 aaKnown RBP18.32■□□□□ 0.52
SBDSP1-201ENST00000415772 VPS53Q5VIR6 699 aa18.32■□□□□ 0.52
SBDSP1-201ENST00000415772 TTBK2Q6IQ55 1244 aa18.32■□□□□ 0.52
SBDSP1-201ENST00000415772 SCLYQ96I15 445 aa18.32■□□□□ 0.52
SBDSP1-201ENST00000415772 PURBQ96QR8 312 aaKnown RBP18.32■□□□□ 0.52
SBDSP1-201ENST00000415772 ALDH8A1Q9H2A2 487 aaPredicted RBP18.32■□□□□ 0.52
SBDSP1-201ENST00000415772 NOD1Q9Y239 953 aa18.32■□□□□ 0.52
SBDSP1-201ENST00000415772 PCDHB15Q9Y5E8 787 aa18.32■□□□□ 0.52
SBDSP1-201ENST00000415772 NFIBO00712 420 aa18.31■□□□□ 0.52
SBDSP1-201ENST00000415772 PFKMP08237 780 aa18.31■□□□□ 0.52
SBDSP1-201ENST00000415772 PTGS1P23219 599 aa18.31■□□□□ 0.52
SBDSP1-201ENST00000415772 CHMP4BP1P59074 171 aa18.31■□□□□ 0.52
SBDSP1-201ENST00000415772 MRPS5P82675 430 aaKnown RBP18.31■□□□□ 0.52
SBDSP1-201ENST00000415772 PPP2R5BQ15173 497 aa18.31■□□□□ 0.52
SBDSP1-201ENST00000415772 RNF207Q6ZRF8 634 aa18.31■□□□□ 0.52
SBDSP1-201ENST00000415772 DEFB128Q7Z7B8 93 aa18.31■□□□□ 0.52
SBDSP1-201ENST00000415772 RETREG2Q8NC44 543 aa18.31■□□□□ 0.52
SBDSP1-201ENST00000415772 TMEM47Q9BQJ4 181 aa18.31■□□□□ 0.52
SBDSP1-201ENST00000415772 MTG1Q9BT17 334 aaPredicted RBP18.31■□□□□ 0.52
SBDSP1-201ENST00000415772 GRIN2DO15399 1336 aa18.3■□□□□ 0.52
SBDSP1-201ENST00000415772 TNKSO95271 1327 aa18.3■□□□□ 0.52
SBDSP1-201ENST00000415772 TRIM6-TRIM34B2RNG4 842 aa18.3■□□□□ 0.52
SBDSP1-201ENST00000415772 NKRFO15226 690 aaKnown RBP eCLIP18.3■□□□□ 0.52
SBDSP1-201ENST00000415772 ATP2A2P16615 1042 aaKnown RBP18.3■□□□□ 0.52
SBDSP1-201ENST00000415772 MFAP1P55081 439 aaKnown RBP18.3■□□□□ 0.52
SBDSP1-201ENST00000415772 SKIV2LQ15477 1246 aaKnown RBP18.3■□□□□ 0.52
SBDSP1-201ENST00000415772 ALX1Q15699 326 aa18.3■□□□□ 0.52
SBDSP1-201ENST00000415772 MCMDC2Q4G0Z9 681 aa18.3■□□□□ 0.52
SBDSP1-201ENST00000415772 BTNL9Q6UXG8 535 aa18.3■□□□□ 0.52
SBDSP1-201ENST00000415772 MORC4Q8TE76 937 aa18.3■□□□□ 0.52
SBDSP1-201ENST00000415772 WNT8AQ9H1J5 351 aa18.3■□□□□ 0.52
SBDSP1-201ENST00000415772 PCDHA11Q9Y5I1 949 aa18.3■□□□□ 0.52
SBDSP1-201ENST00000415772 KPNA6O60684 536 aa18.29■□□□□ 0.52
SBDSP1-201ENST00000415772 CYP2C9P11712 490 aa18.29■□□□□ 0.52
SBDSP1-201ENST00000415772 RABGGTBP53611 331 aa18.29■□□□□ 0.52
SBDSP1-201ENST00000415772 TMEM63BQ5T3F8 832 aa18.29■□□□□ 0.52
SBDSP1-201ENST00000415772 SLC30A10Q6XR72 485 aa18.29■□□□□ 0.52
SBDSP1-201ENST00000415772 MFSD6Q6ZSS7 791 aa18.29■□□□□ 0.52
SBDSP1-201ENST00000415772 SCFD2Q8WU76 684 aa18.29■□□□□ 0.52
SBDSP1-201ENST00000415772 ASB2Q96Q27 587 aa18.29■□□□□ 0.52
SBDSP1-201ENST00000415772 FTOQ9C0B1 505 aaKnown RBP eCLIP18.29■□□□□ 0.52
SBDSP1-201ENST00000415772 TRMT13Q9NUP7 481 aaKnown RBP18.29■□□□□ 0.52
SBDSP1-201ENST00000415772 YBX2Q9Y2T7 364 aaKnown RBP18.29■□□□□ 0.52
SBDSP1-201ENST00000415772 EYSQ5T1H1 3165 aa18.28■□□□□ 0.52
SBDSP1-201ENST00000415772 GTPBP6O43824 516 aaPredicted RBP18.28■□□□□ 0.52
SBDSP1-201ENST00000415772 FGAP02671 866 aa18.28■□□□□ 0.52
SBDSP1-201ENST00000415772 HAND2P61296 217 aa18.28■□□□□ 0.52
SBDSP1-201ENST00000415772 PURAQ00577 322 aaKnown RBP18.28■□□□□ 0.52
SBDSP1-201ENST00000415772 AAMPQ13685 434 aa18.28■□□□□ 0.52
SBDSP1-201ENST00000415772 TMEM67Q5HYA8 995 aa18.28■□□□□ 0.52
SBDSP1-201ENST00000415772 DNERQ8NFT8 737 aa18.28■□□□□ 0.52
SBDSP1-201ENST00000415772 RILPL2Q969X0 211 aa18.28■□□□□ 0.52
SBDSP1-201ENST00000415772 RNF41Q9H4P4 317 aaPredicted RBP18.28■□□□□ 0.52
SBDSP1-201ENST00000415772 TCP11L1Q9NUJ3 509 aa18.28■□□□□ 0.52
SBDSP1-201ENST00000415772 FOXP2O15409 715 aa18.27■□□□□ 0.52
SBDSP1-201ENST00000415772 TXNP10599 105 aaKnown RBP18.27■□□□□ 0.52
SBDSP1-201ENST00000415772 PCP11498 1178 aaKnown RBP18.27■□□□□ 0.52
SBDSP1-201ENST00000415772 RFC2P35250 354 aa18.27■□□□□ 0.52
SBDSP1-201ENST00000415772 ADGRE1Q14246 886 aa18.27■□□□□ 0.52
SBDSP1-201ENST00000415772 USH1GQ495M9 461 aa18.27■□□□□ 0.52
SBDSP1-201ENST00000415772 CCDC155Q8N6L0 562 aa18.27■□□□□ 0.52
SBDSP1-201ENST00000415772 ADAMTS19Q8TE59 1207 aa18.27■□□□□ 0.52
SBDSP1-201ENST00000415772 FAM227BQ96M60 508 aa18.27■□□□□ 0.52
SBDSP1-201ENST00000415772 TTC14Q96N46 770 aa18.27■□□□□ 0.52
SBDSP1-201ENST00000415772 KIF28PB7ZC32 967 aa18.26■□□□□ 0.51
SBDSP1-201ENST00000415772 DHX16O60231 1041 aaKnown RBP18.26■□□□□ 0.51
SBDSP1-201ENST00000415772 HSPD1P10809 573 aaKnown RBP18.26■□□□□ 0.51
SBDSP1-201ENST00000415772 PDHBP11177 359 aa18.26■□□□□ 0.51
SBDSP1-201ENST00000415772 NOVP48745 357 aa18.26■□□□□ 0.51
SBDSP1-201ENST00000415772 PDE1AP54750 535 aa18.26■□□□□ 0.51
SBDSP1-201ENST00000415772 RPS6P62753 249 aaKnown RBP18.26■□□□□ 0.51
SBDSP1-201ENST00000415772 ZNF543Q08ER8 600 aa18.26■□□□□ 0.51
SBDSP1-201ENST00000415772 BFSP2Q13515 415 aa18.26■□□□□ 0.51
SBDSP1-201ENST00000415772 TTLL4Q14679 1199 aa18.26■□□□□ 0.51
SBDSP1-201ENST00000415772 AAK1Q2M2I8 961 aa18.26■□□□□ 0.51
SBDSP1-201ENST00000415772 NBPF20Q3BBV1 942 aa18.26■□□□□ 0.51
SBDSP1-201ENST00000415772 GPATCH4Q5T3I0 446 aaKnown RBP18.26■□□□□ 0.51
SBDSP1-201ENST00000415772 ESR2Q92731 530 aa18.26■□□□□ 0.51
SBDSP1-201ENST00000415772 UHRF1Q96T88 793 aaPredicted RBP18.26■□□□□ 0.51
SBDSP1-201ENST00000415772 WDR19Q8NEZ3 1342 aa18.25■□□□□ 0.51
SBDSP1-201ENST00000415772 A0A0D9SFI3 127 aa18.25■□□□□ 0.51
SBDSP1-201ENST00000415772 RBM47A0AV96 593 aaKnown RBP18.25■□□□□ 0.51
SBDSP1-201ENST00000415772 FGRP09769 529 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms