RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 ADSSL1Q8N142 457 aa17.3■□□□□ 0.36
LRCH3-202ENST00000414675 LARGE2Q8N3Y3 721 aa17.3■□□□□ 0.36
LRCH3-202ENST00000414675 GJA10Q969M2 543 aa17.3■□□□□ 0.36
LRCH3-202ENST00000414675 PPP1R13BQ96KQ4 1090 aa17.3■□□□□ 0.36
LRCH3-202ENST00000414675 PSMD1Q99460 953 aa17.3■□□□□ 0.36
LRCH3-202ENST00000414675 ATF5Q9Y2D1 282 aaPredicted RBP17.3■□□□□ 0.36
LRCH3-202ENST00000414675 A0A1W2PRG0 241 aa17.3■□□□□ 0.36
LRCH3-202ENST00000414675 TRIM49BA6NDI0 452 aa17.3■□□□□ 0.36
LRCH3-202ENST00000414675 POTEMA6NI47 508 aa17.3■□□□□ 0.36
LRCH3-202ENST00000414675 PBX1P40424 430 aa17.3■□□□□ 0.36
LRCH3-202ENST00000414675 FXR2P51116 673 aaKnown RBP eCLIP17.3■□□□□ 0.36
LRCH3-202ENST00000414675 MRPL12P52815 198 aaKnown RBP17.3■□□□□ 0.36
LRCH3-202ENST00000414675 ADKP55263 362 aaKnown RBP17.3■□□□□ 0.36
LRCH3-202ENST00000414675 PTPN14Q15678 1187 aa17.3■□□□□ 0.36
LRCH3-202ENST00000414675 PNMA5Q96PV4 448 aa17.3■□□□□ 0.36
LRCH3-202ENST00000414675 CUEDC2Q9H467 287 aa17.3■□□□□ 0.36
LRCH3-202ENST00000414675 COL2A1P02458 1487 aaPredicted RBP17.29■□□□□ 0.36
LRCH3-202ENST00000414675 SMCHD1A6NHR9 2005 aa17.29■□□□□ 0.36
LRCH3-202ENST00000414675 RHOBTB3O94955 611 aa17.29■□□□□ 0.36
LRCH3-202ENST00000414675 VIL1P09327 827 aaKnown RBP17.29■□□□□ 0.36
LRCH3-202ENST00000414675 TAL1P17542 331 aaPredicted RBP17.29■□□□□ 0.36
LRCH3-202ENST00000414675 PMS1P54277 932 aaKnown RBP17.29■□□□□ 0.36
LRCH3-202ENST00000414675 RTKN2Q8IZC4 609 aa17.29■□□□□ 0.36
LRCH3-202ENST00000414675 NUDT12Q9BQG2 462 aa17.29■□□□□ 0.36
LRCH3-202ENST00000414675 TRIM9Q9C026 710 aa17.29■□□□□ 0.36
LRCH3-202ENST00000414675 LRWD1Q9UFC0 647 aa17.29■□□□□ 0.36
LRCH3-202ENST00000414675 PCDHA1Q9Y5I3 950 aa17.29■□□□□ 0.36
LRCH3-202ENST00000414675 MYL1P05976 194 aa17.28■□□□□ 0.36
LRCH3-202ENST00000414675 KRT31Q15323 416 aa17.28■□□□□ 0.36
LRCH3-202ENST00000414675 RBM26Q5T8P6 1007 aaKnown RBP17.28■□□□□ 0.36
LRCH3-202ENST00000414675 PPP4R3AQ6IN85 833 aa17.28■□□□□ 0.36
LRCH3-202ENST00000414675 CDAN1Q8IWY9 1227 aa17.28■□□□□ 0.36
LRCH3-202ENST00000414675 GMCL1P1Q8NEA9 526 aa17.28■□□□□ 0.36
LRCH3-202ENST00000414675 CCDC112Q8NEF3 446 aa17.28■□□□□ 0.36
LRCH3-202ENST00000414675 ZNF592Q92610 1267 aa17.28■□□□□ 0.36
LRCH3-202ENST00000414675 BLOC1S4Q9NUP1 217 aa17.28■□□□□ 0.36
LRCH3-202ENST00000414675 ZNF70Q9UC06 446 aaPredicted RBP17.28■□□□□ 0.36
LRCH3-202ENST00000414675 PSDA5PKW4 1024 aaPredicted RBP17.28■□□□□ 0.36
LRCH3-202ENST00000414675 CCT6AP40227 531 aaKnown RBP17.28■□□□□ 0.36
LRCH3-202ENST00000414675 GIMAP8Q8ND71 665 aaPredicted RBP17.28■□□□□ 0.36
LRCH3-202ENST00000414675 HAS1Q92839 578 aa17.28■□□□□ 0.36
LRCH3-202ENST00000414675 P2RX7Q99572 595 aaKnown RBP17.28■□□□□ 0.36
LRCH3-202ENST00000414675 MAGEF1Q9HAY2 307 aa17.28■□□□□ 0.36
LRCH3-202ENST00000414675 LIMA1Q9UHB6 759 aaKnown RBP17.28■□□□□ 0.36
LRCH3-202ENST00000414675 DDX25Q9UHL0 483 aaKnown RBP17.28■□□□□ 0.36
LRCH3-202ENST00000414675 CNTNAP1P78357 1384 aa17.27■□□□□ 0.36
LRCH3-202ENST00000414675 IRF2BP1Q8IU81 584 aa17.27■□□□□ 0.36
LRCH3-202ENST00000414675 GMCL1Q96IK5 515 aa17.27■□□□□ 0.36
LRCH3-202ENST00000414675 UIMC1Q96RL1 719 aa17.27■□□□□ 0.36
LRCH3-202ENST00000414675 C7orf25Q9BPX7 421 aa17.27■□□□□ 0.36
LRCH3-202ENST00000414675 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.27■□□□□ 0.36
LRCH3-202ENST00000414675 NRDCO43847 1150 aa17.27■□□□□ 0.35
LRCH3-202ENST00000414675 CALML4Q96GE6 196 aa17.27■□□□□ 0.35
LRCH3-202ENST00000414675 KIF13BQ9NQT8 1826 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 DLGAP5Q15398 846 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 KIAA1755Q5JYT7 1200 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 SPICE1Q8N0Z3 855 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 CTAGE1Q96RT6 745 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 TAB2Q9NYJ8 693 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 LRRC10BA6NIK2 292 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 KCNJ18B7U540 433 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 MEIS2O14770 477 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 ECE1P42892 770 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 ASIC1P78348 528 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 KCNJ12Q14500 433 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 MCM6Q14566 821 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 ECM1Q16610 540 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 TMEM266Q2M3C6 531 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 GRIPAP1Q4V328 841 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 TCP11X2Q5H9J9 407 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 SYDE2Q5VT97 1194 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 KCNK18Q7Z418 384 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 CCDC125Q86Z20 511 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 UBE2Q2Q8WVN8 375 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 HPS3Q969F9 1004 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 VPS16Q9H269 839 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 TMOD2Q9NZR1 351 aa17.26■□□□□ 0.35
LRCH3-202ENST00000414675 FCER1AP12319 257 aa17.25■□□□□ 0.35
LRCH3-202ENST00000414675 COPB1P53618 953 aaKnown RBP17.25■□□□□ 0.35
LRCH3-202ENST00000414675 STK4Q13043 487 aa17.25■□□□□ 0.35
LRCH3-202ENST00000414675 PDIA5Q14554 519 aa17.25■□□□□ 0.35
LRCH3-202ENST00000414675 SPDYE2Q495Y8 402 aa17.25■□□□□ 0.35
LRCH3-202ENST00000414675 ACER1Q8TDN7 264 aa17.25■□□□□ 0.35
LRCH3-202ENST00000414675 SNX29Q8TEQ0 813 aa17.25■□□□□ 0.35
LRCH3-202ENST00000414675 FAM151AQ8WW52 585 aa17.25■□□□□ 0.35
LRCH3-202ENST00000414675 BAG1Q99933 345 aaPredicted RBP17.25■□□□□ 0.35
LRCH3-202ENST00000414675 ANO3Q9BYT9 981 aa17.25■□□□□ 0.35
LRCH3-202ENST00000414675 HERC5Q9UII4 1024 aaKnown RBP17.25■□□□□ 0.35
LRCH3-202ENST00000414675 MYMKA6NI61 221 aa17.24■□□□□ 0.35
LRCH3-202ENST00000414675 BMP3P12645 472 aa17.24■□□□□ 0.35
LRCH3-202ENST00000414675 PDE4DQ08499 809 aa17.24■□□□□ 0.35
LRCH3-202ENST00000414675 RBL2Q08999 1139 aa17.24■□□□□ 0.35
LRCH3-202ENST00000414675 USH1GQ495M9 461 aa17.24■□□□□ 0.35
LRCH3-202ENST00000414675 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.24■□□□□ 0.35
LRCH3-202ENST00000414675 PAXBP1Q9Y5B6 917 aa17.24■□□□□ 0.35
LRCH3-202ENST00000414675 ARHGAP6O43182 974 aa17.24■□□□□ 0.35
LRCH3-202ENST00000414675 IKQ13123 557 aaPredicted RBP17.24■□□□□ 0.35
LRCH3-202ENST00000414675 FILIP1LQ4L180 1135 aa17.24■□□□□ 0.35
LRCH3-202ENST00000414675 TTI2Q6NXR4 508 aa17.24■□□□□ 0.35
LRCH3-202ENST00000414675 CREBRFQ8IUR6 639 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms