RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 SPZ1Q9BXG8 430 aa8.95□□□□□ -0.98
CPSF4-202ENST00000412686 AMNQ9BXJ7 453 aa8.95□□□□□ -0.98
CPSF4-202ENST00000412686 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.95□□□□□ -0.98
CPSF4-202ENST00000412686 RNF208Q9H0X6 261 aa8.95□□□□□ -0.98
CPSF4-202ENST00000412686 NCOA5Q9HCD5 579 aaKnown RBP8.95□□□□□ -0.98
CPSF4-202ENST00000412686 COL20A1Q9P218 1284 aa8.95□□□□□ -0.98
CPSF4-202ENST00000412686 FBXO40Q9UH90 709 aa8.95□□□□□ -0.98
CPSF4-202ENST00000412686 ABCB11O95342 1321 aa8.95□□□□□ -0.98
CPSF4-202ENST00000412686 HTTP42858 3142 aa8.94□□□□□ -0.98
CPSF4-202ENST00000412686 LARGE1O95461 756 aa8.94□□□□□ -0.98
CPSF4-202ENST00000412686 SNAI1O95863 264 aaPredicted RBP8.94□□□□□ -0.98
CPSF4-202ENST00000412686 CYBAP13498 195 aa8.94□□□□□ -0.98
CPSF4-202ENST00000412686 EN2P19622 333 aaPredicted RBP8.94□□□□□ -0.98
CPSF4-202ENST00000412686 PDIA3P30101 505 aaKnown RBP8.94□□□□□ -0.98
CPSF4-202ENST00000412686 GNAQP50148 359 aa8.94□□□□□ -0.98
CPSF4-202ENST00000412686 AK2P54819 239 aa8.94□□□□□ -0.98
CPSF4-202ENST00000412686 RPS6P62753 249 aaKnown RBP8.94□□□□□ -0.98
CPSF4-202ENST00000412686 FUT2Q10981 343 aa8.94□□□□□ -0.98
CPSF4-202ENST00000412686 STK3Q13188 491 aa8.94□□□□□ -0.98
CPSF4-202ENST00000412686 OLFML2BQ68BL8 750 aa8.94□□□□□ -0.98
CPSF4-202ENST00000412686 RNF207Q6ZRF8 634 aa8.94□□□□□ -0.98
CPSF4-202ENST00000412686 GPKOWQ92917 476 aaPredicted RBP eCLIP8.94□□□□□ -0.98
CPSF4-202ENST00000412686 SHISA4Q96DD7 197 aa8.94□□□□□ -0.98
CPSF4-202ENST00000412686 DEFB118Q96PH6 123 aa8.94□□□□□ -0.98
CPSF4-202ENST00000412686 C22orf23Q9BZE7 217 aa8.94□□□□□ -0.98
CPSF4-202ENST00000412686 RBM28Q9NW13 759 aaKnown RBP8.94□□□□□ -0.98
CPSF4-202ENST00000412686 TPCN1Q9ULQ1 816 aa8.94□□□□□ -0.98
CPSF4-202ENST00000412686 DIS3Q9Y2L1 958 aaKnown RBP8.94□□□□□ -0.98
CPSF4-202ENST00000412686 PCDHA1Q9Y5I3 950 aa8.94□□□□□ -0.98
CPSF4-202ENST00000412686 NID2Q14112 1375 aa8.94□□□□□ -0.98
CPSF4-202ENST00000412686 PNMA6FA0A0J9YX94 578 aa8.93□□□□□ -0.98
CPSF4-202ENST00000412686 CFBP00751 764 aa8.93□□□□□ -0.98
CPSF4-202ENST00000412686 PTGS1P23219 599 aa8.93□□□□□ -0.98
CPSF4-202ENST00000412686 CNGA1P29973 690 aa8.93□□□□□ -0.98
CPSF4-202ENST00000412686 HOXA13P31271 388 aaPredicted RBP8.93□□□□□ -0.98
CPSF4-202ENST00000412686 NEK4P51957 841 aa8.93□□□□□ -0.98
CPSF4-202ENST00000412686 EVCP57679 992 aa8.93□□□□□ -0.98
CPSF4-202ENST00000412686 GSE1Q14687 1217 aa8.93□□□□□ -0.98
CPSF4-202ENST00000412686 MFSD14CQ5VZR4 134 aa8.93□□□□□ -0.98
CPSF4-202ENST00000412686 TYW1BQ6NUM6 668 aa8.93□□□□□ -0.98
CPSF4-202ENST00000412686 ARMCX2Q7L311 632 aa8.93□□□□□ -0.98
CPSF4-202ENST00000412686 EEPD1Q7L9B9 569 aa8.93□□□□□ -0.98
CPSF4-202ENST00000412686 TRMT44Q8IYL2 757 aaKnown RBP8.93□□□□□ -0.98
CPSF4-202ENST00000412686 SYTL5Q8TDW5 730 aaPredicted RBP8.93□□□□□ -0.98
CPSF4-202ENST00000412686 PHKBQ93100 1093 aa8.93□□□□□ -0.98
CPSF4-202ENST00000412686 LENG1Q96BZ8 264 aaPredicted RBP8.93□□□□□ -0.98
CPSF4-202ENST00000412686 RRP36Q96EU6 259 aaKnown RBP8.93□□□□□ -0.98
CPSF4-202ENST00000412686 TAAR1Q96RJ0 339 aa8.93□□□□□ -0.98
CPSF4-202ENST00000412686 LZTS2Q9BRK4 669 aa8.93□□□□□ -0.98
CPSF4-202ENST00000412686 TINF2Q9BSI4 451 aa8.93□□□□□ -0.98
CPSF4-202ENST00000412686 HMX1Q9NP08 348 aaPredicted RBP8.93□□□□□ -0.98
CPSF4-202ENST00000412686 PAK6Q9NQU5 681 aaPredicted RBP8.93□□□□□ -0.98
CPSF4-202ENST00000412686 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.93□□□□□ -0.98
CPSF4-202ENST00000412686 SLC5A4Q9NY91 659 aa8.93□□□□□ -0.98
CPSF4-202ENST00000412686 MRPL11Q9Y3B7 192 aaKnown RBP8.93□□□□□ -0.98
CPSF4-202ENST00000412686 PFASO15067 1338 aa8.93□□□□□ -0.98
CPSF4-202ENST00000412686 RPTORQ8N122 1335 aa8.93□□□□□ -0.98
CPSF4-202ENST00000412686 EIF5BO60841 1220 aaKnown RBP8.92□□□□□ -0.98
CPSF4-202ENST00000412686 GJB1P08034 283 aa8.92□□□□□ -0.98
CPSF4-202ENST00000412686 ZNF865P0CJ78 1059 aaPredicted RBP8.92□□□□□ -0.98
CPSF4-202ENST00000412686 SMARCA1P28370 1054 aa8.92□□□□□ -0.98
CPSF4-202ENST00000412686 RBM25P49756 843 aaKnown RBP8.92□□□□□ -0.98
CPSF4-202ENST00000412686 ALDH5A1P51649 535 aaPredicted RBP8.92□□□□□ -0.98
CPSF4-202ENST00000412686 CLCN6P51797 869 aa8.92□□□□□ -0.98
CPSF4-202ENST00000412686 RCAN1P53805 252 aa8.92□□□□□ -0.98
CPSF4-202ENST00000412686 SCRN1Q12765 414 aa8.92□□□□□ -0.98
CPSF4-202ENST00000412686 NTRK3Q16288 839 aa8.92□□□□□ -0.98
CPSF4-202ENST00000412686 TMEM63BQ5T3F8 832 aa8.92□□□□□ -0.98
CPSF4-202ENST00000412686 IFFO2Q5TF58 517 aa8.92□□□□□ -0.98
CPSF4-202ENST00000412686 WWC2Q6AWC2 1192 aa8.92□□□□□ -0.98
CPSF4-202ENST00000412686 MAMDC4Q6UXC1 1216 aa8.92□□□□□ -0.98
CPSF4-202ENST00000412686 HEATR3Q7Z4Q2 680 aa8.92□□□□□ -0.98
CPSF4-202ENST00000412686 ZNF467Q7Z7K2 595 aaPredicted RBP8.92□□□□□ -0.98
CPSF4-202ENST00000412686 FBXO16Q8IX29 292 aaPredicted RBP8.92□□□□□ -0.98
CPSF4-202ENST00000412686 NECAB1Q8N987 351 aa8.92□□□□□ -0.98
CPSF4-202ENST00000412686 U2AF1L4Q8WU68 220 aaKnown RBP8.92□□□□□ -0.98
CPSF4-202ENST00000412686 TMEM106CQ9BVX2 250 aa8.92□□□□□ -0.98
CPSF4-202ENST00000412686 BACH2Q9BYV9 841 aa8.92□□□□□ -0.98
CPSF4-202ENST00000412686 KATNBL1Q9H079 304 aa8.92□□□□□ -0.98
CPSF4-202ENST00000412686 SEC63Q9UGP8 760 aaKnown RBP8.92□□□□□ -0.98
CPSF4-202ENST00000412686 ZHX1Q9UKY1 873 aaPredicted RBP8.92□□□□□ -0.98
CPSF4-202ENST00000412686 PNMA2Q9UL42 364 aa8.92□□□□□ -0.98
CPSF4-202ENST00000412686 V9GY48 417 aaPredicted RBP8.92□□□□□ -0.98
CPSF4-202ENST00000412686 SYNGAP1Q96PV0 1343 aa8.91□□□□□ -0.98
CPSF4-202ENST00000412686 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.91□□□□□ -0.98
CPSF4-202ENST00000412686 ADAMTS3O15072 1205 aa8.91□□□□□ -0.98
CPSF4-202ENST00000412686 ADCY6O43306 1168 aa8.91□□□□□ -0.98
CPSF4-202ENST00000412686 SGPL1O95470 568 aa8.91□□□□□ -0.98
CPSF4-202ENST00000412686 GJA8P48165 433 aa8.91□□□□□ -0.98
CPSF4-202ENST00000412686 HSD17B4P51659 736 aa8.91□□□□□ -0.98
CPSF4-202ENST00000412686 IRX5P78411 483 aaPredicted RBP8.91□□□□□ -0.98
CPSF4-202ENST00000412686 ST3GAL1Q11201 340 aa8.91□□□□□ -0.98
CPSF4-202ENST00000412686 ME3Q16798 604 aa8.91□□□□□ -0.98
CPSF4-202ENST00000412686 LHX8Q68G74 356 aa8.91□□□□□ -0.98
CPSF4-202ENST00000412686 FCHSD1Q86WN1 690 aa8.91□□□□□ -0.98
CPSF4-202ENST00000412686 ZFP91Q96JP5 570 aaPredicted RBP8.91□□□□□ -0.98
CPSF4-202ENST00000412686 PHF12Q96QT6 1004 aa8.91□□□□□ -0.98
CPSF4-202ENST00000412686 SLC26A6Q9BXS9 759 aa8.91□□□□□ -0.98
CPSF4-202ENST00000412686 PDGFCQ9NRA1 345 aa8.91□□□□□ -0.98
CPSF4-202ENST00000412686 DDX20Q9UHI6 824 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms