RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 ZNF287Q9HBT7 754 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 C6orf50Q9HD87 102 aa15.29■□□□□ 0.04
CLTCL1-201ENST00000412649 CCNE1P24864 410 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 PAPD7Q5XG87 772 aaKnown RBP15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 PPP4R3AQ6IN85 833 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 KDM7AQ6ZMT4 941 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 OXER1Q8TDS5 423 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 PLVAPQ9BX97 442 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 UBXN6Q9BZV1 441 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 YIPF3Q9GZM5 350 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 USP49Q70CQ1 688 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 DYMQ7RTS9 669 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 FOXP4Q8IVH2 680 aaPredicted RBP15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 MYCBPAPQ8TBZ2 947 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 EHD4Q9H223 541 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 FAM114A2Q9NRY5 505 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 ATP8A1Q9Y2Q0 1164 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 SALL1Q9NSC2 1324 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 ROBO2Q9HCK4 1378 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 SLC4A8Q2Y0W8 1093 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 ZNF526Q8TF50 670 aaPredicted RBP15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 CPDO75976 1380 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 MUM1Q2TAK8 710 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 GRIPAP1Q4V328 841 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 TMOD3Q9NYL9 352 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 MTUS1Q9ULD2 1270 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 TFR2Q9UP52 801 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 CD2APQ9Y5K6 639 aa15.28■□□□□ 0.04
CLTCL1-201ENST00000412649 POLR2FP61218 127 aaKnown RBP15.27■□□□□ 0.04
CLTCL1-201ENST00000412649 FBXO3Q9UK99 471 aa15.27■□□□□ 0.04
CLTCL1-201ENST00000412649 PGRMC1O00264 195 aaKnown RBP15.27■□□□□ 0.03
CLTCL1-201ENST00000412649 FSBPO95073 299 aa15.27■□□□□ 0.03
CLTCL1-201ENST00000412649 ATF3P18847 181 aa15.27■□□□□ 0.03
CLTCL1-201ENST00000412649 MAGOHP61326 146 aaKnown RBP15.27■□□□□ 0.03
CLTCL1-201ENST00000412649 PUM3Q15397 648 aaKnown RBP15.27■□□□□ 0.03
CLTCL1-201ENST00000412649 KRT26Q7Z3Y9 468 aa15.27■□□□□ 0.03
CLTCL1-201ENST00000412649 ANKRD42Q8N9B4 389 aa15.27■□□□□ 0.03
CLTCL1-201ENST00000412649 SPATA5Q8NB90 893 aa15.27■□□□□ 0.03
CLTCL1-201ENST00000412649 MAGOHBQ96A72 148 aaKnown RBP15.27■□□□□ 0.03
CLTCL1-201ENST00000412649 ANKARQ7Z5J8 1434 aa15.27■□□□□ 0.03
CLTCL1-201ENST00000412649 MYL1P05976 194 aa15.27■□□□□ 0.03
CLTCL1-201ENST00000412649 ANTXR2P58335 489 aa15.27■□□□□ 0.03
CLTCL1-201ENST00000412649 GRIN1Q05586 938 aa15.27■□□□□ 0.03
CLTCL1-201ENST00000412649 PRPF38AQ8NAV1 312 aaKnown RBP15.27■□□□□ 0.03
CLTCL1-201ENST00000412649 STMN2Q93045 179 aa15.27■□□□□ 0.03
CLTCL1-201ENST00000412649 MAP3K14Q99558 947 aa15.27■□□□□ 0.03
CLTCL1-201ENST00000412649 LY9Q9HBG7 655 aa15.27■□□□□ 0.03
CLTCL1-201ENST00000412649 SLC39A2Q9NP94 309 aa15.27■□□□□ 0.03
CLTCL1-201ENST00000412649 USP31Q70CQ4 1352 aa15.27■□□□□ 0.03
CLTCL1-201ENST00000412649 PLEKHG1Q9ULL1 1385 aa15.27■□□□□ 0.03
CLTCL1-201ENST00000412649 TMEM110-MUSTN1A8MSY1 372 aa15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 EIF3BP55884 814 aaKnown RBP15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 DPYDQ12882 1025 aa15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 PPP2R5EQ16537 467 aa15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 MAN2A1Q16706 1144 aa15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 EP400NLQ6ZTU2 488 aa15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 BLIDQ8IZY5 108 aa15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 PSMD1Q99460 953 aa15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 TRIM4Q9C037 500 aa15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 ABCC12Q96J65 1359 aa15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 CETN2P41208 172 aa15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 ZBTB16Q05516 673 aa15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 TSC22D3Q99576 134 aa15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 ELAC2Q9BQ52 826 aaKnown RBP15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 AMFRQ9UKV5 643 aa15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 ERCC6L2Q5T890 1561 aa15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 A0A0U1RQJ8 604 aa15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 CCNT1O60563 726 aaKnown RBP15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 SCG2P13521 617 aa15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 GNA11P29992 359 aa15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 TAF1DQ9H5J8 278 aaPredicted RBP15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 IRS4O14654 1257 aaPredicted RBP15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 STX2P32856 288 aa15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 UHMK1Q8TAS1 419 aaKnown RBP15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 ZSCAN10Q96SZ4 725 aaPredicted RBP15.26■□□□□ 0.03
CLTCL1-201ENST00000412649 MMEP08473 750 aa15.25■□□□□ 0.03
CLTCL1-201ENST00000412649 DCAF17Q5H9S7 520 aaPredicted RBP15.25■□□□□ 0.03
CLTCL1-201ENST00000412649 DDX12PQ92771 950 aa15.25■□□□□ 0.03
CLTCL1-201ENST00000412649 CHMP6Q96FZ7 201 aa15.25■□□□□ 0.03
CLTCL1-201ENST00000412649 SEC16BQ96JE7 1060 aa15.25■□□□□ 0.03
CLTCL1-201ENST00000412649 MROH1Q8NDA8 1641 aa15.25■□□□□ 0.03
CLTCL1-201ENST00000412649 CFAP73A6NFT4 308 aa15.25■□□□□ 0.03
CLTCL1-201ENST00000412649 A1BGP04217 495 aa15.25■□□□□ 0.03
CLTCL1-201ENST00000412649 SEL1L2Q5TEA6 688 aa15.25■□□□□ 0.03
CLTCL1-201ENST00000412649 SGMS1Q86VZ5 419 aa15.25■□□□□ 0.03
CLTCL1-201ENST00000412649 NDST4Q9H3R1 872 aa15.25■□□□□ 0.03
CLTCL1-201ENST00000412649 MAGEF1Q9HAY2 307 aa15.25■□□□□ 0.03
CLTCL1-201ENST00000412649 PARP2Q9UGN5 583 aa15.25■□□□□ 0.03
CLTCL1-201ENST00000412649 DMGDHQ9UI17 866 aaKnown RBP15.25■□□□□ 0.03
CLTCL1-201ENST00000412649 PALMO75781 387 aa15.25■□□□□ 0.03
CLTCL1-201ENST00000412649 DZIP1Q86YF9 867 aaKnown RBP15.25■□□□□ 0.03
CLTCL1-201ENST00000412649 ZKSCAN4Q969J2 545 aaPredicted RBP15.25■□□□□ 0.03
CLTCL1-201ENST00000412649 PBKQ96KB5 322 aa15.25■□□□□ 0.03
CLTCL1-201ENST00000412649 NEDD4P46934 1319 aa15.25■□□□□ 0.03
CLTCL1-201ENST00000412649 BACH1O14867 736 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 TXKP42681 527 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 RASSF2P50749 326 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 LPIN2Q92539 896 aa15.24■□□□□ 0.03
CLTCL1-201ENST00000412649 ARHGEF2Q92974 986 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms