RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 DIS3Q9Y2L1 958 aaKnown RBP6.89□□□□□ -1.31
CLK1-203ENST00000409769 BAZ1BQ9UIG0 1483 aaKnown RBP6.89□□□□□ -1.31
CLK1-203ENST00000409769 ADAMTS20P59510 1910 aa6.89□□□□□ -1.31
CLK1-203ENST00000409769 FAM86C2PA6NEL3 165 aa6.88□□□□□ -1.31
CLK1-203ENST00000409769 EIF6P56537 245 aaKnown RBP6.88□□□□□ -1.31
CLK1-203ENST00000409769 ZC3H6P61129 1189 aaKnown RBP6.88□□□□□ -1.31
CLK1-203ENST00000409769 AXDND1Q5T1B0 1012 aaPredicted RBP6.88□□□□□ -1.31
CLK1-203ENST00000409769 UNC5AQ6ZN44 842 aa6.88□□□□□ -1.31
CLK1-203ENST00000409769 PPFIBP1Q86W92 1011 aa6.88□□□□□ -1.31
CLK1-203ENST00000409769 FIBCD1Q8N539 461 aa6.88□□□□□ -1.31
CLK1-203ENST00000409769 FEZF2Q8TBJ5 459 aa6.88□□□□□ -1.31
CLK1-203ENST00000409769 C8orf37Q96NL8 207 aa6.88□□□□□ -1.31
CLK1-203ENST00000409769 PTCHD1Q96NR3 888 aa6.88□□□□□ -1.31
CLK1-203ENST00000409769 CRBNQ96SW2 442 aa6.88□□□□□ -1.31
CLK1-203ENST00000409769 KRTAP4-5Q9BYR2 181 aa6.88□□□□□ -1.31
CLK1-203ENST00000409769 ZNF214Q9UL59 606 aaPredicted RBP6.88□□□□□ -1.31
CLK1-203ENST00000409769 L1CAMP32004 1257 aa6.87□□□□□ -1.31
CLK1-203ENST00000409769 ZNF200P98182 395 aaPredicted RBP6.87□□□□□ -1.31
CLK1-203ENST00000409769 FBXW10Q5XX13 1052 aa6.87□□□□□ -1.31
CLK1-203ENST00000409769 EEF1DP3Q658K8 133 aa6.87□□□□□ -1.31
CLK1-203ENST00000409769 BICRALQ6AI39 1079 aa6.87□□□□□ -1.31
CLK1-203ENST00000409769 CABP7Q86V35 215 aa6.87□□□□□ -1.31
CLK1-203ENST00000409769 BRF1Q92994 677 aa6.87□□□□□ -1.31
CLK1-203ENST00000409769 FCRL3Q96P31 734 aaPredicted RBP6.87□□□□□ -1.31
CLK1-203ENST00000409769 WHRNQ9P202 907 aa6.87□□□□□ -1.31
CLK1-203ENST00000409769 MSL3P1P0C860 447 aa6.86□□□□□ -1.31
CLK1-203ENST00000409769 KCNC1P48547 511 aa6.86□□□□□ -1.31
CLK1-203ENST00000409769 NCKAP1LP55160 1127 aa6.86□□□□□ -1.31
CLK1-203ENST00000409769 CASP7P55210 303 aa6.86□□□□□ -1.31
CLK1-203ENST00000409769 VMACQ2NL98 169 aa6.86□□□□□ -1.31
CLK1-203ENST00000409769 RCSD1Q6JBY9 416 aa6.86□□□□□ -1.31
CLK1-203ENST00000409769 TP53P04637 393 aaPredicted RBP6.85□□□□□ -1.31
CLK1-203ENST00000409769 CD3EP07766 207 aa6.85□□□□□ -1.31
CLK1-203ENST00000409769 FGRP09769 529 aa6.85□□□□□ -1.31
CLK1-203ENST00000409769 NCAM1P13591 858 aa6.85□□□□□ -1.31
CLK1-203ENST00000409769 FBLN1P23142 703 aa6.85□□□□□ -1.31
CLK1-203ENST00000409769 ARID5AQ03989 594 aa6.85□□□□□ -1.31
CLK1-203ENST00000409769 TP53I13Q8NBR0 393 aaPredicted RBP6.85□□□□□ -1.31
CLK1-203ENST00000409769 GBP3Q9H0R5 595 aa6.85□□□□□ -1.31
CLK1-203ENST00000409769 NOL6Q9H6R4 1146 aaKnown RBP6.85□□□□□ -1.31
CLK1-203ENST00000409769 PHAXQ9H814 394 aaKnown RBP6.85□□□□□ -1.31
CLK1-203ENST00000409769 DBR1Q9UK59 544 aaKnown RBP6.85□□□□□ -1.31
CLK1-203ENST00000409769 CNOT11Q9UKZ1 510 aaKnown RBP6.85□□□□□ -1.31
CLK1-203ENST00000409769 FAN1Q9Y2M0 1017 aa6.85□□□□□ -1.31
CLK1-203ENST00000409769 ZNF451Q9Y4E5 1061 aa6.85□□□□□ -1.31
CLK1-203ENST00000409769 FFAR3O14843 346 aa6.84□□□□□ -1.31
CLK1-203ENST00000409769 ZYXQ15942 572 aaKnown RBP6.84□□□□□ -1.31
CLK1-203ENST00000409769 SKOR2Q2VWA4 1001 aaPredicted RBP6.84□□□□□ -1.31
CLK1-203ENST00000409769 CCDC81Q6ZN84 652 aa6.84□□□□□ -1.31
CLK1-203ENST00000409769 NUDT5Q9UKK9 219 aa6.84□□□□□ -1.31
CLK1-203ENST00000409769 TRBV23OR9-2A0A075B6M9 112 aa6.83□□□□□ -1.32
CLK1-203ENST00000409769 F8W031 263 aaPredicted RBP6.83□□□□□ -1.32
CLK1-203ENST00000409769 IFNGR1P15260 489 aa6.83□□□□□ -1.32
CLK1-203ENST00000409769 LIMS1P48059 325 aa6.83□□□□□ -1.32
CLK1-203ENST00000409769 SLURP1P55000 103 aa6.83□□□□□ -1.32
CLK1-203ENST00000409769 FOXO4P98177 505 aa6.83□□□□□ -1.32
CLK1-203ENST00000409769 ZFYVE27Q5T4F4 411 aa6.83□□□□□ -1.32
CLK1-203ENST00000409769 PRRT2Q7Z6L0 340 aaPredicted RBP6.83□□□□□ -1.32
CLK1-203ENST00000409769 ZDHHC14Q8IZN3 488 aa6.83□□□□□ -1.32
CLK1-203ENST00000409769 CPLX3Q8WVH0 158 aa6.83□□□□□ -1.32
CLK1-203ENST00000409769 TSPAN17Q96FV3 270 aa6.83□□□□□ -1.32
CLK1-203ENST00000409769 ZDHHC15Q96MV8 337 aa6.83□□□□□ -1.32
CLK1-203ENST00000409769 HAUS7Q99871 368 aa6.83□□□□□ -1.32
CLK1-203ENST00000409769 PMF1-BGLAPU3KQ54 211 aa6.83□□□□□ -1.32
CLK1-203ENST00000409769 CCDC88BA6NC98 1476 aa6.82□□□□□ -1.32
CLK1-203ENST00000409769 A0A1W2PQH9 124 aa6.82□□□□□ -1.32
CLK1-203ENST00000409769 AURKAO14965 403 aa6.82□□□□□ -1.32
CLK1-203ENST00000409769 CBFA2T2O43439 604 aa6.82□□□□□ -1.32
CLK1-203ENST00000409769 PPM1BO75688 479 aa6.82□□□□□ -1.32
CLK1-203ENST00000409769 ADRB1P08588 477 aa6.82□□□□□ -1.32
CLK1-203ENST00000409769 GLI4P10075 376 aa6.82□□□□□ -1.32
CLK1-203ENST00000409769 HTRA3P83110 453 aa6.82□□□□□ -1.32
CLK1-203ENST00000409769 PRR5P85299 388 aa6.82□□□□□ -1.32
CLK1-203ENST00000409769 SLC9A5Q14940 896 aa6.82□□□□□ -1.32
CLK1-203ENST00000409769 HEATR6Q6AI08 1181 aaKnown RBP6.82□□□□□ -1.32
CLK1-203ENST00000409769 RUFY4Q6ZNE9 571 aa6.82□□□□□ -1.32
CLK1-203ENST00000409769 MCF2L2Q86YR7 1114 aa6.82□□□□□ -1.32
CLK1-203ENST00000409769 NETO2Q8NC67 525 aa6.82□□□□□ -1.32
CLK1-203ENST00000409769 FNIP1Q8TF40 1166 aa6.82□□□□□ -1.32
CLK1-203ENST00000409769 SUSD2Q9UGT4 822 aa6.82□□□□□ -1.32
CLK1-203ENST00000409769 SH3D21A4FU49 640 aa6.81□□□□□ -1.32
CLK1-203ENST00000409769 GRB10Q13322 594 aa6.81□□□□□ -1.32
CLK1-203ENST00000409769 GNPTABQ3T906 1256 aa6.81□□□□□ -1.32
CLK1-203ENST00000409769 SPATS1Q496A3 300 aa6.81□□□□□ -1.32
CLK1-203ENST00000409769 VWA3BQ502W6 1294 aa6.81□□□□□ -1.32
CLK1-203ENST00000409769 NAALADL2Q58DX5 795 aa6.81□□□□□ -1.32
CLK1-203ENST00000409769 TNNI3KQ59H18 835 aa6.81□□□□□ -1.32
CLK1-203ENST00000409769 SAPCD2Q86UD0 394 aa6.81□□□□□ -1.32
CLK1-203ENST00000409769 FAM169BQ8N8A8 192 aa6.81□□□□□ -1.32
CLK1-203ENST00000409769 SYT8Q8NBV8 401 aa6.81□□□□□ -1.32
CLK1-203ENST00000409769 ALG3Q92685 438 aa6.81□□□□□ -1.32
CLK1-203ENST00000409769 PEX11GQ96HA9 241 aa6.81□□□□□ -1.32
CLK1-203ENST00000409769 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.81□□□□□ -1.322e-14■□□□□ 10.6
CLK1-203ENST00000409769 JAG2Q9Y219 1238 aa6.81□□□□□ -1.32
CLK1-203ENST00000409769 LTBP3Q9NS15 1303 aa6.8□□□□□ -1.32
CLK1-203ENST00000409769 ZBTB7AO95365 584 aa6.8□□□□□ -1.32
CLK1-203ENST00000409769 SSBP05455 408 aaKnown RBP eCLIP6.8□□□□□ -1.32
CLK1-203ENST00000409769 SEPHS1P49903 392 aa6.8□□□□□ -1.32
CLK1-203ENST00000409769 LIPIQ6XZB0 460 aa6.8□□□□□ -1.32
CLK1-203ENST00000409769 B3GNT8Q7Z7M8 397 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms