RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 FAM196BA6NMK8 535 aa20.08■□□□□ 0.8
CHTOP-205ENST00000403433 RAD21O60216 631 aa20.08■□□□□ 0.8
CHTOP-205ENST00000403433 NPM3O75607 178 aaKnown RBP20.08■□□□□ 0.8
CHTOP-205ENST00000403433 SLURP2P0DP57 97 aa20.08■□□□□ 0.8
CHTOP-205ENST00000403433 TRIM14Q14142 442 aa20.08■□□□□ 0.8
CHTOP-205ENST00000403433 AOC3Q16853 763 aa20.08■□□□□ 0.8
CHTOP-205ENST00000403433 DHTKD1Q96HY7 919 aaPredicted RBP20.08■□□□□ 0.8
CHTOP-205ENST00000403433 CDK5RAP3Q96JB5 506 aa20.08■□□□□ 0.8
CHTOP-205ENST00000403433 TRIM47Q96LD4 638 aa20.08■□□□□ 0.8
CHTOP-205ENST00000403433 THAP9Q9H5L6 903 aa20.08■□□□□ 0.8
CHTOP-205ENST00000403433 L2HGDHQ9H9P8 463 aa20.08■□□□□ 0.8
CHTOP-205ENST00000403433 EEF2P13639 858 aaKnown RBP20.07■□□□□ 0.8
CHTOP-205ENST00000403433 PPP1R2P41236 205 aa20.07■□□□□ 0.8
CHTOP-205ENST00000403433 CLK2P49760 499 aaKnown RBP20.07■□□□□ 0.8
CHTOP-205ENST00000403433 PDE4DQ08499 809 aa20.07■□□□□ 0.8
CHTOP-205ENST00000403433 TRIM65Q6PJ69 517 aa20.07■□□□□ 0.8
CHTOP-205ENST00000403433 NOC3LQ8WTT2 800 aaKnown RBP20.07■□□□□ 0.8
CHTOP-205ENST00000403433 NYAP2Q9P242 653 aa20.07■□□□□ 0.8
CHTOP-205ENST00000403433 MAGEC2Q9UBF1 373 aaPredicted RBP20.07■□□□□ 0.8
CHTOP-205ENST00000403433 STK17AQ9UEE5 414 aa20.07■□□□□ 0.8
CHTOP-205ENST00000403433 GYPCP04921 128 aa20.06■□□□□ 0.8
CHTOP-205ENST00000403433 EEF1GP26641 437 aaKnown RBP20.06■□□□□ 0.8
CHTOP-205ENST00000403433 SLC1A4P43007 532 aa20.06■□□□□ 0.8
CHTOP-205ENST00000403433 PPP4R3AQ6IN85 833 aa20.06■□□□□ 0.8
CHTOP-205ENST00000403433 MKL1Q969V6 931 aa20.06■□□□□ 0.8
CHTOP-205ENST00000403433 GLT8D2Q9H1C3 349 aa20.06■□□□□ 0.8
CHTOP-205ENST00000403433 PSTPIP2Q9H939 334 aa20.06■□□□□ 0.8
CHTOP-205ENST00000403433 MYH7BA7E2Y1 1941 aa20.06■□□□□ 0.8
CHTOP-205ENST00000403433 BICDL2A1A5D9 508 aa20.06■□□□□ 0.8
CHTOP-205ENST00000403433 RXRBP28702 533 aa20.06■□□□□ 0.8
CHTOP-205ENST00000403433 CASP14P31944 242 aa20.06■□□□□ 0.8
CHTOP-205ENST00000403433 SLFN13Q68D06 897 aa20.06■□□□□ 0.8
CHTOP-205ENST00000403433 AEBP2Q6ZN18 517 aaPredicted RBP20.06■□□□□ 0.8
CHTOP-205ENST00000403433 SV2BQ7L1I2 683 aa20.06■□□□□ 0.8
CHTOP-205ENST00000403433 DDX25Q9UHL0 483 aaKnown RBP20.06■□□□□ 0.8
CHTOP-205ENST00000403433 SOWAHDA6NJG2 315 aa20.05■□□□□ 0.8
CHTOP-205ENST00000403433 CCDC175P0C221 793 aa20.05■□□□□ 0.8
CHTOP-205ENST00000403433 GCFC2P16383 781 aaKnown RBP20.05■□□□□ 0.8
CHTOP-205ENST00000403433 PMS1P54277 932 aaKnown RBP20.05■□□□□ 0.8
CHTOP-205ENST00000403433 ICA1Q05084 483 aa20.05■□□□□ 0.8
CHTOP-205ENST00000403433 GRB10Q13322 594 aa20.05■□□□□ 0.8
CHTOP-205ENST00000403433 PDIA5Q14554 519 aa20.05■□□□□ 0.8
CHTOP-205ENST00000403433 CNNM4Q6P4Q7 775 aa20.05■□□□□ 0.8
CHTOP-205ENST00000403433 TMEM179Q6ZVK1 233 aa20.05■□□□□ 0.8
CHTOP-205ENST00000403433 SH3BP5LQ7L8J4 393 aa20.05■□□□□ 0.8
CHTOP-205ENST00000403433 SUPT20HQ8NEM7 779 aa20.05■□□□□ 0.8
CHTOP-205ENST00000403433 NAP1L4Q99733 375 aaKnown RBP20.05■□□□□ 0.8
CHTOP-205ENST00000403433 EDIL3O43854 480 aa20.04■□□□□ 0.8
CHTOP-205ENST00000403433 UBXN1Q04323 297 aa20.04■□□□□ 0.8
CHTOP-205ENST00000403433 TTI2Q6NXR4 508 aa20.04■□□□□ 0.8
CHTOP-205ENST00000403433 TATDN1Q6P1N9 297 aa20.04■□□□□ 0.8
CHTOP-205ENST00000403433 DESI2Q9BSY9 194 aa20.04■□□□□ 0.8
CHTOP-205ENST00000403433 FXR1P51114 621 aaKnown RBP eCLIP20.04■□□□□ 0.8
CHTOP-205ENST00000403433 NAA30Q147X3 362 aaPredicted RBP20.04■□□□□ 0.8
CHTOP-205ENST00000403433 QRICH1Q2TAL8 776 aa20.04■□□□□ 0.8
CHTOP-205ENST00000403433 KRT79Q5XKE5 535 aa20.04■□□□□ 0.8
CHTOP-205ENST00000403433 CC2D2BQ6DHV5 1058 aa20.04■□□□□ 0.8
CHTOP-205ENST00000403433 IRF2BP1Q8IU81 584 aa20.04■□□□□ 0.8
CHTOP-205ENST00000403433 SNX29Q8TEQ0 813 aa20.04■□□□□ 0.8
CHTOP-205ENST00000403433 P2RX5Q93086 422 aa20.04■□□□□ 0.8
CHTOP-205ENST00000403433 NUP88Q99567 741 aaPredicted RBP20.04■□□□□ 0.8
CHTOP-205ENST00000403433 SRRTQ9BXP5 876 aaKnown RBP20.04■□□□□ 0.8
CHTOP-205ENST00000403433 CGNQ9P2M7 1197 aaKnown RBP20.04■□□□□ 0.8
CHTOP-205ENST00000403433 POTEMA6NI47 508 aa20.03■□□□□ 0.8
CHTOP-205ENST00000403433 LGALS16A8MUM7 142 aa20.03■□□□□ 0.8
CHTOP-205ENST00000403433 MARCH6O60337 910 aa20.03■□□□□ 0.8
CHTOP-205ENST00000403433 CCNE1P24864 410 aa20.03■□□□□ 0.8
CHTOP-205ENST00000403433 MTF1Q14872 753 aa20.03■□□□□ 0.8
CHTOP-205ENST00000403433 SEPT2Q15019 361 aa20.03■□□□□ 0.8
CHTOP-205ENST00000403433 CDC37Q16543 378 aaPredicted RBP20.03■□□□□ 0.8
CHTOP-205ENST00000403433 ABCB5Q2M3G0 1257 aa20.03■□□□□ 0.8
CHTOP-205ENST00000403433 SHROOM1Q2M3G4 852 aaPredicted RBP20.03■□□□□ 0.8
CHTOP-205ENST00000403433 CCDC93Q567U6 631 aa20.03■□□□□ 0.8
CHTOP-205ENST00000403433 CSGALNACT2Q8N6G5 542 aa20.03■□□□□ 0.8
CHTOP-205ENST00000403433 LARP4BQ92615 738 aaKnown RBP20.03■□□□□ 0.8
CHTOP-205ENST00000403433 PNMA5Q96PV4 448 aa20.03■□□□□ 0.8
CHTOP-205ENST00000403433 ENTPD3O75355 529 aa20.02■□□□□ 0.8
CHTOP-205ENST00000403433 GNG11P61952 73 aa20.02■□□□□ 0.8
CHTOP-205ENST00000403433 FAM114A1Q8IWE2 563 aa20.02■□□□□ 0.8
CHTOP-205ENST00000403433 C7orf43Q8WVR3 580 aa20.02■□□□□ 0.8
CHTOP-205ENST00000403433 ARID3AQ99856 593 aa20.02■□□□□ 0.8
CHTOP-205ENST00000403433 CCDC94Q9BW85 323 aaPredicted RBP20.02■□□□□ 0.8
CHTOP-205ENST00000403433 TDRD3Q9H7E2 651 aaKnown RBP20.02■□□□□ 0.8
CHTOP-205ENST00000403433 BLOC1S4Q9NUP1 217 aa20.02■□□□□ 0.8
CHTOP-205ENST00000403433 ATRNL1Q5VV63 1379 aa20.02■□□□□ 0.8
CHTOP-205ENST00000403433 PSME4Q14997 1843 aa20.02■□□□□ 0.8
CHTOP-205ENST00000403433 PPIP5K2O43314 1243 aa20.02■□□□□ 0.79
CHTOP-205ENST00000403433 FECHP22830 423 aa20.02■□□□□ 0.79
CHTOP-205ENST00000403433 CASQ1P31415 396 aa20.02■□□□□ 0.79
CHTOP-205ENST00000403433 STK4Q13043 487 aa20.02■□□□□ 0.79
CHTOP-205ENST00000403433 MCM6Q14566 821 aa20.02■□□□□ 0.79
CHTOP-205ENST00000403433 SLC15A2Q16348 729 aa20.02■□□□□ 0.79
CHTOP-205ENST00000403433 COBLL1Q53SF7 1204 aa20.02■□□□□ 0.79
CHTOP-205ENST00000403433 RAD9BQ6WBX8 426 aa20.02■□□□□ 0.79
CHTOP-205ENST00000403433 LRRC27Q9C0I9 530 aa20.02■□□□□ 0.79
CHTOP-205ENST00000403433 ABHD10Q9NUJ1 306 aa20.02■□□□□ 0.79
CHTOP-205ENST00000403433 STK32BQ9NY57 414 aa20.02■□□□□ 0.79
CHTOP-205ENST00000403433 ATF5Q9Y2D1 282 aaPredicted RBP20.02■□□□□ 0.79
CHTOP-205ENST00000403433 PCDHA1Q9Y5I3 950 aa20.02■□□□□ 0.79
CHTOP-205ENST00000403433 COL2A1P02458 1487 aaPredicted RBP20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms