RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 CFAP61Q8NHU2 1237 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 NHEJ1Q9H9Q4 299 aaPredicted RBP10.89□□□□□ -0.67
PTPRM-203ENST00000400060 MAP3K2Q9Y2U5 619 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 AGTP01019 485 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 IMPDH2P12268 514 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 ATP4AP20648 1035 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 DHX9Q08211 1270 aaKnown RBP10.89□□□□□ -0.67
PTPRM-203ENST00000400060 RIPK1Q13546 671 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 ADCK5Q3MIX3 580 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 C2CD5Q86YS7 1000 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 FAM186BQ8IYM0 893 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 MAB21L3Q8N8X9 362 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 FAM227BQ96M60 508 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 XPO6Q96QU8 1125 aaKnown RBP10.89□□□□□ -0.67
PTPRM-203ENST00000400060 ZMYND12Q9H0C1 365 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 CARD9Q9H257 536 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 TUBE1Q9UJT0 475 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 TSGA10IPQ3SY00 556 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 NOSTRINQ8IVI9 506 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 SYCP3Q8IZU3 236 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 TC2NQ8N9U0 490 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 RNPC3Q96LT9 517 aaKnown RBP10.89□□□□□ -0.67
PTPRM-203ENST00000400060 DRC3Q9H069 523 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 USP15Q9Y4E8 981 aaPredicted RBP10.89□□□□□ -0.67
PTPRM-203ENST00000400060 GRM8O00222 908 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 PDHBP11177 359 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 PRLRP16471 622 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 TRAPPC11Q7Z392 1133 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 ANKRD42Q8N9B4 389 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 DHTKD1Q96HY7 919 aaPredicted RBP10.89□□□□□ -0.67
PTPRM-203ENST00000400060 RMI1Q9H9A7 625 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 USP40Q9NVE5 1235 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 TMCO1Q9UM00 188 aa10.89□□□□□ -0.67
PTPRM-203ENST00000400060 ASAP2O43150 1006 aa10.88□□□□□ -0.67
PTPRM-203ENST00000400060 STARD3NLO95772 234 aa10.88□□□□□ -0.67
PTPRM-203ENST00000400060 MYBL2P10244 700 aa10.88□□□□□ -0.67
PTPRM-203ENST00000400060 TNFRSF8P28908 595 aa10.88□□□□□ -0.67
PTPRM-203ENST00000400060 AP2B1P63010 937 aa10.88□□□□□ -0.67
PTPRM-203ENST00000400060 KSR2Q6VAB6 950 aa10.88□□□□□ -0.67
PTPRM-203ENST00000400060 FTOQ9C0B1 505 aaKnown RBP eCLIP10.88□□□□□ -0.67
PTPRM-203ENST00000400060 SLITRK6Q9H5Y7 841 aa10.88□□□□□ -0.67
PTPRM-203ENST00000400060 PCDHA13Q9Y5I0 950 aa10.88□□□□□ -0.67
PTPRM-203ENST00000400060 PASKQ96RG2 1323 aa10.88□□□□□ -0.67
PTPRM-203ENST00000400060 CROCC2H7BZ55 1655 aa10.88□□□□□ -0.67
PTPRM-203ENST00000400060 SPAG7O75391 227 aa10.88□□□□□ -0.67
PTPRM-203ENST00000400060 PARP1P09874 1014 aaKnown RBP10.88□□□□□ -0.67
PTPRM-203ENST00000400060 FAM200BP0CF97 657 aa10.88□□□□□ -0.67
PTPRM-203ENST00000400060 FMO2Q99518 471 aa10.88□□□□□ -0.67
PTPRM-203ENST00000400060 EIF2AQ9BY44 585 aaKnown RBP10.88□□□□□ -0.67
PTPRM-203ENST00000400060 DMAP1Q9NPF5 467 aaPredicted RBP10.88□□□□□ -0.67
PTPRM-203ENST00000400060 SNX12Q9UMY4 172 aa10.88□□□□□ -0.67
PTPRM-203ENST00000400060 EDC4Q6P2E9 1401 aaKnown RBP10.88□□□□□ -0.67
PTPRM-203ENST00000400060 FOXO3O43524 673 aa10.88□□□□□ -0.67
PTPRM-203ENST00000400060 WFS1O76024 890 aa10.88□□□□□ -0.67
PTPRM-203ENST00000400060 COPS2P61201 443 aa10.88□□□□□ -0.67
PTPRM-203ENST00000400060 TMEM259Q4ZIN3 620 aa10.88□□□□□ -0.67
PTPRM-203ENST00000400060 DTHD1Q6ZMT9 781 aa10.88□□□□□ -0.67
PTPRM-203ENST00000400060 KIFC2Q96AC6 838 aa10.88□□□□□ -0.67
PTPRM-203ENST00000400060 MRPL44Q9H9J2 332 aaKnown RBP10.88□□□□□ -0.67
PTPRM-203ENST00000400060 ATXN10Q9UBB4 475 aa10.88□□□□□ -0.67
PTPRM-203ENST00000400060 PDIA3P30101 505 aaKnown RBP10.87□□□□□ -0.67
PTPRM-203ENST00000400060 MAGEA8P43361 318 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 MAGOHP61326 146 aaKnown RBP10.87□□□□□ -0.67
PTPRM-203ENST00000400060 RCN2Q14257 317 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 ADRM1Q16186 407 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 TRIM74Q86UV6 250 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 TRIM73Q86UV7 250 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 DIS3L2Q8IYB7 885 aaKnown RBP10.87□□□□□ -0.67
PTPRM-203ENST00000400060 MAGOHBQ96A72 148 aaKnown RBP10.87□□□□□ -0.67
PTPRM-203ENST00000400060 CUEDC2Q9H467 287 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 CIDEBQ9UHD4 219 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 GNAT2P19087 354 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 KIF23Q02241 960 aaPredicted RBP10.87□□□□□ -0.67
PTPRM-203ENST00000400060 KLHL30Q0D2K2 578 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 LINS1Q8NG48 757 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.87□□□□□ -0.67
PTPRM-203ENST00000400060 NOC2LQ9Y3T9 749 aaKnown RBP10.87□□□□□ -0.67
PTPRM-203ENST00000400060 E7EWF7 191 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 TRPM2O94759 1503 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 BAG2O95816 211 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 STMN1P16949 149 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 PDE1BQ01064 536 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 RAPGEF1Q13905 1077 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 MTHFSDQ2M296 383 aaKnown RBP10.87□□□□□ -0.67
PTPRM-203ENST00000400060 ZNF658Q5TYW1 1059 aaPredicted RBP10.87□□□□□ -0.67
PTPRM-203ENST00000400060 SPATA4Q8NEY3 305 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 MMS19Q96T76 1030 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 UBXN6Q9BZV1 441 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 PARVBQ9HBI1 364 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 CLTCL1P53675 1640 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 ORC4O43929 436 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 RTN3O95197 1032 aaPredicted RBP10.87□□□□□ -0.67
PTPRM-203ENST00000400060 IL13P35225 146 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 IL15P40933 162 aaPredicted RBP10.87□□□□□ -0.67
PTPRM-203ENST00000400060 GJA8P48165 433 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 GNAQP50148 359 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 KBTBD3Q8NAB2 608 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 CATSPER1Q8NEC5 780 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 ZIM3Q96PE6 472 aa10.87□□□□□ -0.67
PTPRM-203ENST00000400060 NUF2Q9BZD4 464 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms