RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 PTPDC1A2A3K4 754 aa20.58■□□□□ 0.89
TNFSF13-204ENST00000396542 SGPL1O95470 568 aa20.58■□□□□ 0.89
TNFSF13-204ENST00000396542 SNAI1O95863 264 aaPredicted RBP20.58■□□□□ 0.89
TNFSF13-204ENST00000396542 CAPN2P17655 700 aa20.58■□□□□ 0.89
TNFSF13-204ENST00000396542 PDIA3P30101 505 aaKnown RBP20.58■□□□□ 0.89
TNFSF13-204ENST00000396542 TBC1D5Q92609 795 aa20.58■□□□□ 0.89
TNFSF13-204ENST00000396542 SHISA4Q96DD7 197 aa20.58■□□□□ 0.89
TNFSF13-204ENST00000396542 DEFB118Q96PH6 123 aa20.58■□□□□ 0.89
TNFSF13-204ENST00000396542 CRISPLD2Q9H0B8 497 aa20.58■□□□□ 0.89
TNFSF13-204ENST00000396542 SEC63Q9UGP8 760 aaKnown RBP20.58■□□□□ 0.89
TNFSF13-204ENST00000396542 NAP1L2Q9ULW6 460 aaPredicted RBP20.58■□□□□ 0.89
TNFSF13-204ENST00000396542 LOC102724159A0A0B4J2E5 919 aa20.57■□□□□ 0.88
TNFSF13-204ENST00000396542 EN2P19622 333 aaPredicted RBP20.57■□□□□ 0.88
TNFSF13-204ENST00000396542 ADD1P35611 737 aaKnown RBP20.57■□□□□ 0.88
TNFSF13-204ENST00000396542 PWP2Q15269 919 aaKnown RBP20.57■□□□□ 0.88
TNFSF13-204ENST00000396542 CCDC82Q8N4S0 544 aa20.57■□□□□ 0.88
TNFSF13-204ENST00000396542 SAMD3Q8N6K7 520 aa20.57■□□□□ 0.88
TNFSF13-204ENST00000396542 MORC4Q8TE76 937 aa20.57■□□□□ 0.88
TNFSF13-204ENST00000396542 PIBF1Q8WXW3 757 aa20.57■□□□□ 0.88
TNFSF13-204ENST00000396542 ZNF274Q96GC6 653 aaPredicted RBP20.57■□□□□ 0.88
TNFSF13-204ENST00000396542 PURBQ96QR8 312 aaKnown RBP20.57■□□□□ 0.88
TNFSF13-204ENST00000396542 ADD3Q9UEY8 706 aaKnown RBP20.57■□□□□ 0.88
TNFSF13-204ENST00000396542 ASB14A6NK59 587 aa20.56■□□□□ 0.88
TNFSF13-204ENST00000396542 ZNF865P0CJ78 1059 aaPredicted RBP20.56■□□□□ 0.88
TNFSF13-204ENST00000396542 CALML3P27482 149 aa20.56■□□□□ 0.88
TNFSF13-204ENST00000396542 RBM25P49756 843 aaKnown RBP20.56■□□□□ 0.88
TNFSF13-204ENST00000396542 HSD17B4P51659 736 aa20.56■□□□□ 0.88
TNFSF13-204ENST00000396542 PRAMEF19Q5SWL8 479 aa20.56■□□□□ 0.88
TNFSF13-204ENST00000396542 LHX8Q68G74 356 aa20.56■□□□□ 0.88
TNFSF13-204ENST00000396542 ARMCX2Q7L311 632 aa20.56■□□□□ 0.88
TNFSF13-204ENST00000396542 SYTL5Q8TDW5 730 aaPredicted RBP20.56■□□□□ 0.88
TNFSF13-204ENST00000396542 KATNBL1Q9H079 304 aa20.56■□□□□ 0.88
TNFSF13-204ENST00000396542 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.56■□□□□ 0.88
TNFSF13-204ENST00000396542 MAP3K20Q9NYL2 800 aaKnown RBP20.56■□□□□ 0.88
TNFSF13-204ENST00000396542 SEPT4O43236 478 aa20.55■□□□□ 0.88
TNFSF13-204ENST00000396542 ALDH5A1P51649 535 aaPredicted RBP20.55■□□□□ 0.88
TNFSF13-204ENST00000396542 NTRK3Q16288 839 aa20.55■□□□□ 0.88
TNFSF13-204ENST00000396542 DNERQ8NFT8 737 aa20.55■□□□□ 0.88
TNFSF13-204ENST00000396542 KIF2CQ99661 725 aa20.55■□□□□ 0.88
TNFSF13-204ENST00000396542 C22orf23Q9BZE7 217 aa20.55■□□□□ 0.88
TNFSF13-204ENST00000396542 COL20A1Q9P218 1284 aa20.55■□□□□ 0.88
TNFSF13-204ENST00000396542 DDX20Q9UHI6 824 aaKnown RBP20.55■□□□□ 0.88
TNFSF13-204ENST00000396542 CNPY2Q9Y2B0 182 aa20.55■□□□□ 0.88
TNFSF13-204ENST00000396542 hCG_1642624A0A1W2PR95 340 aa20.54■□□□□ 0.88
TNFSF13-204ENST00000396542 MSCO60682 206 aa20.54■□□□□ 0.88
TNFSF13-204ENST00000396542 ANKRD1Q15327 319 aa20.54■□□□□ 0.88
TNFSF13-204ENST00000396542 ABHD16BQ9H3Z7 469 aa20.54■□□□□ 0.88
TNFSF13-204ENST00000396542 OGDHLQ9ULD0 1010 aa20.54■□□□□ 0.88
TNFSF13-204ENST00000396542 CFBP00751 764 aa20.53■□□□□ 0.88
TNFSF13-204ENST00000396542 EDNRBP24530 442 aa20.53■□□□□ 0.88
TNFSF13-204ENST00000396542 CNGA1P29973 690 aa20.53■□□□□ 0.88
TNFSF13-204ENST00000396542 AK2P54819 239 aa20.53■□□□□ 0.88
TNFSF13-204ENST00000396542 ACVR2BQ13705 512 aa20.53■□□□□ 0.88
TNFSF13-204ENST00000396542 LARP6Q9BRS8 491 aaKnown RBP20.53■□□□□ 0.88
TNFSF13-204ENST00000396542 V9GY48 417 aaPredicted RBP20.53■□□□□ 0.88
TNFSF13-204ENST00000396542 IFNAR1P17181 557 aa20.52■□□□□ 0.88
TNFSF13-204ENST00000396542 NEK4P51957 841 aa20.52■□□□□ 0.88
TNFSF13-204ENST00000396542 CCT2P78371 535 aaKnown RBP20.52■□□□□ 0.88
TNFSF13-204ENST00000396542 UBE2Q1Q7Z7E8 422 aa20.52■□□□□ 0.88
TNFSF13-204ENST00000396542 TAAR1Q96RJ0 339 aa20.52■□□□□ 0.88
TNFSF13-204ENST00000396542 NCOA5Q9HCD5 579 aaKnown RBP20.52■□□□□ 0.88
TNFSF13-204ENST00000396542 TPCN1Q9ULQ1 816 aa20.52■□□□□ 0.88
TNFSF13-204ENST00000396542 DDX49Q9Y6V7 483 aaKnown RBP20.52■□□□□ 0.88
TNFSF13-204ENST00000396542 GCOM1H8Y6P7 765 aaPredicted RBP20.51■□□□□ 0.87
TNFSF13-204ENST00000396542 hCG_1984214I3L0E3 225 aa20.51■□□□□ 0.87
TNFSF13-204ENST00000396542 TFRCP02786 760 aaKnown RBP20.51■□□□□ 0.87
TNFSF13-204ENST00000396542 POLR2MP0CAP2 368 aa20.51■□□□□ 0.87
TNFSF13-204ENST00000396542 AKR1A1P14550 325 aa20.51■□□□□ 0.87
TNFSF13-204ENST00000396542 WWC2Q6AWC2 1192 aa20.51■□□□□ 0.87
TNFSF13-204ENST00000396542 ZNF713Q8N859 430 aaPredicted RBP20.51■□□□□ 0.87
TNFSF13-204ENST00000396542 ANKLE1Q8NAG6 615 aa20.51■□□□□ 0.87
TNFSF13-204ENST00000396542 PIK3CDO00329 1044 aa20.5■□□□□ 0.87
TNFSF13-204ENST00000396542 PRPF3O43395 683 aaKnown RBP20.5■□□□□ 0.87
TNFSF13-204ENST00000396542 HOXA13P31271 388 aaPredicted RBP20.5■□□□□ 0.87
TNFSF13-204ENST00000396542 PFKFB3Q16875 520 aaPredicted RBP20.5■□□□□ 0.87
TNFSF13-204ENST00000396542 PPP1R18Q6NYC8 613 aa20.5■□□□□ 0.87
TNFSF13-204ENST00000396542 HEATR3Q7Z4Q2 680 aa20.5■□□□□ 0.87
TNFSF13-204ENST00000396542 NSUN6Q8TEA1 469 aaKnown RBP20.5■□□□□ 0.87
TNFSF13-204ENST00000396542 GPKOWQ92917 476 aaPredicted RBP eCLIP20.5■□□□□ 0.87
TNFSF13-204ENST00000396542 RMDN3Q96TC7 470 aa20.5■□□□□ 0.87
TNFSF13-204ENST00000396542 MPHOSPH6Q99547 160 aaKnown RBP20.5■□□□□ 0.87
TNFSF13-204ENST00000396542 RNF26Q9BY78 433 aaPredicted RBP20.5■□□□□ 0.87
TNFSF13-204ENST00000396542 UPF2Q9HAU5 1272 aaKnown RBP20.5■□□□□ 0.87
TNFSF13-204ENST00000396542 VTA1Q9NP79 307 aa20.5■□□□□ 0.87
TNFSF13-204ENST00000396542 RBM27Q9P2N5 1060 aaKnown RBP20.5■□□□□ 0.87
TNFSF13-204ENST00000396542 ZHX1Q9UKY1 873 aaPredicted RBP20.5■□□□□ 0.87
TNFSF13-204ENST00000396542 KIAA1217Q5T5P2 1943 aa20.49■□□□□ 0.87
TNFSF13-204ENST00000396542 MEIS2O14770 477 aa20.49■□□□□ 0.87
TNFSF13-204ENST00000396542 PFKFB2O60825 505 aa20.49■□□□□ 0.87
TNFSF13-204ENST00000396542 MNX1P50219 401 aaPredicted RBP20.49■□□□□ 0.87
TNFSF13-204ENST00000396542 PKN1Q16512 942 aa20.49■□□□□ 0.87
TNFSF13-204ENST00000396542 CCDC144BQ3MJ40 725 aa20.49■□□□□ 0.87
TNFSF13-204ENST00000396542 TYW1BQ6NUM6 668 aa20.49■□□□□ 0.87
TNFSF13-204ENST00000396542 TAPT1Q6NXT6 567 aa20.49■□□□□ 0.87
TNFSF13-204ENST00000396542 PHKBQ93100 1093 aa20.49■□□□□ 0.87
TNFSF13-204ENST00000396542 IWS1Q96ST2 819 aa20.49■□□□□ 0.87
TNFSF13-204ENST00000396542 BACH2Q9BYV9 841 aa20.49■□□□□ 0.87
TNFSF13-204ENST00000396542 PXMP2Q9NR77 195 aa20.49■□□□□ 0.87
TNFSF13-204ENST00000396542 BARHL2Q9NY43 387 aa20.49■□□□□ 0.87
TNFSF13-204ENST00000396542 FAM184BQ9ULE4 1060 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms