RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 C2orf49Q9BVC5 232 aaPredicted RBP4.06□□□□□ -1.76
XRCC4-203ENST00000396027 PPP1R12CQ9BZL4 782 aa4.06□□□□□ -1.76
XRCC4-203ENST00000396027 NAT10Q9H0A0 1025 aaKnown RBP4.06□□□□□ -1.76
XRCC4-203ENST00000396027 VIPAS39Q9H9C1 493 aa4.06□□□□□ -1.76
XRCC4-203ENST00000396027 ACTR5Q9H9F9 607 aaPredicted RBP4.06□□□□□ -1.76
XRCC4-203ENST00000396027 L2HGDHQ9H9P8 463 aa4.06□□□□□ -1.76
XRCC4-203ENST00000396027 PCDH18Q9HCL0 1135 aa4.06□□□□□ -1.76
XRCC4-203ENST00000396027 MIS18AQ9NYP9 233 aa4.06□□□□□ -1.76
XRCC4-203ENST00000396027 TFIP11Q9UBB9 837 aaKnown RBP4.06□□□□□ -1.76
XRCC4-203ENST00000396027 PCSK1NQ9UHG2 260 aa4.06□□□□□ -1.76
XRCC4-203ENST00000396027 CFAP45Q9UL16 551 aa4.06□□□□□ -1.76
XRCC4-203ENST00000396027 CORO1CQ9ULV4 474 aaPredicted RBP4.06□□□□□ -1.76
XRCC4-203ENST00000396027 TMCO1Q9UM00 188 aa4.06□□□□□ -1.76
XRCC4-203ENST00000396027 TMED5Q9Y3A6 229 aa4.06□□□□□ -1.76
XRCC4-203ENST00000396027 FHOD1Q9Y613 1164 aa4.06□□□□□ -1.76
XRCC4-203ENST00000396027 FYCO1Q9BQS8 1478 aa4.06□□□□□ -1.76
XRCC4-203ENST00000396027 ZNF503-AS2A6NEH8 195 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 FAM196BA6NMK8 535 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 J3QW42 95 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 TTI1O43156 1089 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 ZEB2O60315 1214 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 SASH3O75995 380 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 TMCC1O94876 653 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 FSBPO95073 299 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 NAT1P18440 290 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 INPP5BP32019 993 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 PAPOLAP51003 745 aaKnown RBP4.05□□□□□ -1.76
XRCC4-203ENST00000396027 TUBA1BP68363 451 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 CCDC15Q0P6D6 951 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 SCRN1Q12765 414 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 FOXD4Q12950 439 aaPredicted RBP4.05□□□□□ -1.76
XRCC4-203ENST00000396027 CCDC40Q4G0X9 1142 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 NXNQ6DKJ4 435 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 LARP1Q6PKG0 1096 aaKnown RBP4.05□□□□□ -1.76
XRCC4-203ENST00000396027 MTHFD1LQ6UB35 978 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 TUBA1AQ71U36 451 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 HDXQ7Z353 690 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 DZIP1Q86YF9 867 aaKnown RBP4.05□□□□□ -1.76
XRCC4-203ENST00000396027 CCAR1Q8IX12 1150 aaKnown RBP4.05□□□□□ -1.76
XRCC4-203ENST00000396027 ALDH16A1Q8IZ83 802 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 ARHGAP18Q8N392 663 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 LRRN4CLQ8ND94 238 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 ARHGAP45Q92619 1136 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 SMARCC1Q92922 1105 aaPredicted RBP4.05□□□□□ -1.76
XRCC4-203ENST00000396027 TTC14Q96N46 770 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 SLX1AQ9BQ83 275 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 CCDC28BQ9BUN5 200 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 RUSC1Q9BVN2 902 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 EIF2AQ9BY44 585 aaKnown RBP4.05□□□□□ -1.76
XRCC4-203ENST00000396027 TRIM4Q9C037 500 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 LRRC4CQ9HCJ2 640 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 PARD6AQ9NPB6 346 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 SATB2Q9UPW6 733 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 LUC7L2Q9Y383 392 aaKnown RBP4.05□□□□□ -1.76
XRCC4-203ENST00000396027 ZNF644Q9H582 1327 aaPredicted RBP4.05□□□□□ -1.76
XRCC4-203ENST00000396027 SYNJ1O43426 1573 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 BICRAQ9NZM4 1560 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 RAPGEF2Q9Y4G8 1499 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 ANKRD62A6NC57 917 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 NPIPB6E9PJ23 425 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 SMIM24O75264 130 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 STAM2O75886 525 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 PARNO95453 639 aaKnown RBP4.05□□□□□ -1.76
XRCC4-203ENST00000396027 ZNF24P17028 368 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 XBP1P17861 261 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 POLR2EP19388 210 aaKnown RBP4.05□□□□□ -1.76
XRCC4-203ENST00000396027 CASTP20810 708 aaKnown RBP4.05□□□□□ -1.76
XRCC4-203ENST00000396027 CCNCP24863 283 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 CDC27P30260 824 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 SOX18P35713 384 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 LMAN1P49257 510 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 ACADVLP49748 655 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 CLNS1AP54105 237 aaKnown RBP4.05□□□□□ -1.76
XRCC4-203ENST00000396027 INHBEP58166 350 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 KRTAP10-2P60368 255 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 IKQ13123 557 aaPredicted RBP4.05□□□□□ -1.76
XRCC4-203ENST00000396027 PTK7Q13308 1070 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 CUL4BQ13620 913 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 ENOX2Q16206 610 aaKnown RBP4.05□□□□□ -1.76
XRCC4-203ENST00000396027 TPD52L1Q16890 204 aaPredicted RBP4.05□□□□□ -1.76
XRCC4-203ENST00000396027 WHAMMP3Q1A5X7 153 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 ZNF394Q53GI3 561 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 CCDC183Q5T5S1 534 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 KANK4Q5T7N3 995 aaPredicted RBP4.05□□□□□ -1.76
XRCC4-203ENST00000396027 PRRT2Q7Z6L0 340 aaPredicted RBP4.05□□□□□ -1.76
XRCC4-203ENST00000396027 ARHGEF25Q86VW2 580 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 SHISA5Q8N114 240 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 TRIM58Q8NG06 486 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 OR8K1Q8NGG5 319 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 TRPC4APQ8TEL6 797 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 GIMAP1Q8WWP7 306 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 MAML1Q92585 1016 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 CUL5Q93034 780 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 MRFAP1L1Q96HT8 127 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 SCYL1Q96KG9 808 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 JPH2Q9BR39 696 aaPredicted RBP4.05□□□□□ -1.76
XRCC4-203ENST00000396027 PAGR1Q9BTK6 254 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 YIPF2Q9BWQ6 316 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 IFT122Q9HBG6 1241 aa4.05□□□□□ -1.76
XRCC4-203ENST00000396027 VCX3AQ9NNX9 186 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms