RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 PLCG2P16885 1265 aa17.3■□□□□ 0.36
CPSF7-202ENST00000394888 CCDC51Q96ER9 411 aa17.3■□□□□ 0.36
CPSF7-202ENST00000394888 RIMBP2O15034 1052 aa17.3■□□□□ 0.36
CPSF7-202ENST00000394888 SEMA3FQ13275 785 aa17.3■□□□□ 0.36
CPSF7-202ENST00000394888 RRP36Q96EU6 259 aaKnown RBP17.3■□□□□ 0.36
CPSF7-202ENST00000394888 EEF2KMTQ96G04 330 aa17.3■□□□□ 0.36
CPSF7-202ENST00000394888 ANKZF1Q9H8Y5 726 aa17.3■□□□□ 0.36
CPSF7-202ENST00000394888 LZTFL1Q9NQ48 299 aa17.3■□□□□ 0.36
CPSF7-202ENST00000394888 SUGT1Q9Y2Z0 365 aa17.3■□□□□ 0.36
CPSF7-202ENST00000394888 CCDC175P0C221 793 aa17.29■□□□□ 0.36
CPSF7-202ENST00000394888 EIF6P56537 245 aaKnown RBP17.29■□□□□ 0.36
CPSF7-202ENST00000394888 JAKMIP3Q5VZ66 844 aa17.29■□□□□ 0.36
CPSF7-202ENST00000394888 FGFBP2Q9BYJ0 223 aa17.29■□□□□ 0.36
CPSF7-202ENST00000394888 TRPC5Q9UL62 973 aaPredicted RBP17.29■□□□□ 0.36
CPSF7-202ENST00000394888 EPHB6O15197 1021 aa17.29■□□□□ 0.36
CPSF7-202ENST00000394888 CUEDC2Q9H467 287 aa17.29■□□□□ 0.36
CPSF7-202ENST00000394888 AGPAT5Q9NUQ2 364 aa17.29■□□□□ 0.36
CPSF7-202ENST00000394888 CAPN11Q9UMQ6 739 aa17.29■□□□□ 0.36
CPSF7-202ENST00000394888 GOLGA6L9A6NEM1 432 aa17.29■□□□□ 0.36
CPSF7-202ENST00000394888 PICALMQ13492 652 aa17.29■□□□□ 0.36
CPSF7-202ENST00000394888 CENPPQ6IPU0 288 aa17.29■□□□□ 0.36
CPSF7-202ENST00000394888 CNGA4Q8IV77 575 aa17.29■□□□□ 0.36
CPSF7-202ENST00000394888 ZNF263O14978 683 aa17.28■□□□□ 0.36
CPSF7-202ENST00000394888 ORC2Q13416 577 aaPredicted RBP17.28■□□□□ 0.36
CPSF7-202ENST00000394888 SRRTQ9BXP5 876 aaKnown RBP17.28■□□□□ 0.36
CPSF7-202ENST00000394888 VAT1LQ9HCJ6 419 aa17.28■□□□□ 0.36
CPSF7-202ENST00000394888 RIC8AQ9NPQ8 531 aa17.28■□□□□ 0.36
CPSF7-202ENST00000394888 FAM198AQ9UFP1 575 aa17.28■□□□□ 0.36
CPSF7-202ENST00000394888 PCDHA2Q9Y5H9 948 aa17.28■□□□□ 0.36
CPSF7-202ENST00000394888 POTEMA6NI47 508 aa17.28■□□□□ 0.36
CPSF7-202ENST00000394888 N4BP3O15049 544 aa17.28■□□□□ 0.36
CPSF7-202ENST00000394888 TBC1D8O95759 1140 aa17.28■□□□□ 0.36
CPSF7-202ENST00000394888 EEF1GP26641 437 aaKnown RBP17.28■□□□□ 0.36
CPSF7-202ENST00000394888 REXO1Q8N1G1 1221 aaKnown RBP17.28■□□□□ 0.36
CPSF7-202ENST00000394888 MAGEF1Q9HAY2 307 aa17.28■□□□□ 0.36
CPSF7-202ENST00000394888 PNMA6AP0CW24 399 aaPredicted RBP17.28■□□□□ 0.36
CPSF7-202ENST00000394888 CASQ1P31415 396 aa17.28■□□□□ 0.36
CPSF7-202ENST00000394888 SCNN1DP51172 638 aa17.28■□□□□ 0.36
CPSF7-202ENST00000394888 UBE2SQ16763 222 aa17.28■□□□□ 0.36
CPSF7-202ENST00000394888 ASPRV1Q53RT3 343 aa17.28■□□□□ 0.36
CPSF7-202ENST00000394888 UTP14CQ5TAP6 766 aaKnown RBP17.28■□□□□ 0.36
CPSF7-202ENST00000394888 DNAJC19Q96DA6 116 aa17.28■□□□□ 0.36
CPSF7-202ENST00000394888 SEC31AO94979 1220 aaKnown RBP17.27■□□□□ 0.36
CPSF7-202ENST00000394888 RRP1BQ14684 758 aaKnown RBP17.27■□□□□ 0.36
CPSF7-202ENST00000394888 DOK7Q18PE1 504 aa17.27■□□□□ 0.36
CPSF7-202ENST00000394888 C6orf50Q9HD87 102 aa17.27■□□□□ 0.36
CPSF7-202ENST00000394888 B4DLN1 442 aa17.27■□□□□ 0.36
CPSF7-202ENST00000394888 PPP2R3AQ06190 1150 aa17.27■□□□□ 0.36
CPSF7-202ENST00000394888 LRRC55Q6ZSA7 311 aa17.27■□□□□ 0.36
CPSF7-202ENST00000394888 P2RX5Q93086 422 aa17.27■□□□□ 0.36
CPSF7-202ENST00000394888 DHTKD1Q96HY7 919 aaPredicted RBP17.27■□□□□ 0.36
CPSF7-202ENST00000394888 SIK3Q9Y2K2 1263 aa17.27■□□□□ 0.36
CPSF7-202ENST00000394888 ZCWPW2Q504Y3 356 aa17.27■□□□□ 0.35
CPSF7-202ENST00000394888 DDTLA6NHG4 134 aaPredicted RBP17.26■□□□□ 0.35
CPSF7-202ENST00000394888 F8W031 263 aaPredicted RBP17.26■□□□□ 0.35
CPSF7-202ENST00000394888 C6orf229H3BNL8 230 aa17.26■□□□□ 0.35
CPSF7-202ENST00000394888 hCG_1984214I3L0E3 225 aa17.26■□□□□ 0.35
CPSF7-202ENST00000394888 CCNE1P24864 410 aa17.26■□□□□ 0.35
CPSF7-202ENST00000394888 UBA7P41226 1012 aa17.26■□□□□ 0.35
CPSF7-202ENST00000394888 HHIPL2Q6UWX4 724 aa17.26■□□□□ 0.35
CPSF7-202ENST00000394888 SLC35F6Q8N357 371 aa17.26■□□□□ 0.35
CPSF7-202ENST00000394888 ZNF713Q8N859 430 aaPredicted RBP17.26■□□□□ 0.35
CPSF7-202ENST00000394888 ZNF287Q9HBT7 754 aa17.26■□□□□ 0.35
CPSF7-202ENST00000394888 OPLAHO14841 1288 aa17.26■□□□□ 0.35
CPSF7-202ENST00000394888 UBXN1Q04323 297 aa17.26■□□□□ 0.35
CPSF7-202ENST00000394888 HYIQ5T013 277 aa17.26■□□□□ 0.35
CPSF7-202ENST00000394888 PPP4R3AQ6IN85 833 aa17.26■□□□□ 0.35
CPSF7-202ENST00000394888 MBOAT7Q96N66 472 aa17.26■□□□□ 0.35
CPSF7-202ENST00000394888 PURBQ96QR8 312 aaKnown RBP17.26■□□□□ 0.35
CPSF7-202ENST00000394888 EHD4Q9H223 541 aa17.26■□□□□ 0.35
CPSF7-202ENST00000394888 USP17L10C9JJH3 530 aa17.26■□□□□ 0.35
CPSF7-202ENST00000394888 SPIRE1Q08AE8 756 aa17.26■□□□□ 0.35
CPSF7-202ENST00000394888 MCM6Q14566 821 aa17.26■□□□□ 0.35
CPSF7-202ENST00000394888 AMOTL1Q8IY63 956 aa17.26■□□□□ 0.35
CPSF7-202ENST00000394888 SERPINB13Q9UIV8 391 aa17.26■□□□□ 0.35
CPSF7-202ENST00000394888 TTF2Q9UNY4 1162 aaKnown RBP17.26■□□□□ 0.35
CPSF7-202ENST00000394888 TTLL1O95922 423 aa17.25■□□□□ 0.35
CPSF7-202ENST00000394888 GNA11P29992 359 aa17.25■□□□□ 0.35
CPSF7-202ENST00000394888 SLC16A2P36021 539 aa17.25■□□□□ 0.35
CPSF7-202ENST00000394888 SPAG1Q07617 926 aa17.25■□□□□ 0.35
CPSF7-202ENST00000394888 ZNF662Q6ZS27 426 aa17.25■□□□□ 0.35
CPSF7-202ENST00000394888 TMC4Q7Z404 712 aa17.25■□□□□ 0.35
CPSF7-202ENST00000394888 PPFIBP1Q86W92 1011 aa17.25■□□□□ 0.35
CPSF7-202ENST00000394888 KRT9P35527 623 aa17.25■□□□□ 0.35
CPSF7-202ENST00000394888 TMTC1Q8IUR5 882 aa17.25■□□□□ 0.35
CPSF7-202ENST00000394888 PNKPQ96T60 521 aa17.25■□□□□ 0.35
CPSF7-202ENST00000394888 GPCPD1Q9NPB8 672 aa17.25■□□□□ 0.35
CPSF7-202ENST00000394888 MYH10P35580 1976 aa17.25■□□□□ 0.35
CPSF7-202ENST00000394888 PARP14Q460N5 1801 aa17.25■□□□□ 0.35
CPSF7-202ENST00000394888 PNMA6FA0A0J9YX94 578 aa17.25■□□□□ 0.35
CPSF7-202ENST00000394888 NDUFA10O95299 355 aa17.25■□□□□ 0.35
CPSF7-202ENST00000394888 CC2D1AQ6P1N0 951 aaPredicted RBP17.25■□□□□ 0.35
CPSF7-202ENST00000394888 ZDHHC15Q96MV8 337 aa17.25■□□□□ 0.35
CPSF7-202ENST00000394888 TUBGCP2Q9BSJ2 902 aa17.25■□□□□ 0.35
CPSF7-202ENST00000394888 FAM196BA6NMK8 535 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 TXLNAP40222 546 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 TXKP42681 527 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 DPY19L2P1Q6NXN4 242 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 CCDC34Q96HJ3 373 aa17.24■□□□□ 0.35
CPSF7-202ENST00000394888 USP40Q9NVE5 1235 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms