RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 MAPK8IP1Q9UQF2 711 aa10.17□□□□□ -0.78
TDP1-202ENST00000393452 KCNJ18B7U540 433 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 COBLO75128 1261 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 TXKP42681 527 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 SLC1A4P43007 532 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 COPB1P53618 953 aaKnown RBP10.16□□□□□ -0.78
TDP1-202ENST00000393452 PMS1P54277 932 aaKnown RBP10.16□□□□□ -0.78
TDP1-202ENST00000393452 RBL2Q08999 1139 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 KCNJ12Q14500 433 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 TTI2Q6NXR4 508 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 CALML4Q96GE6 196 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 DHTKD1Q96HY7 919 aaPredicted RBP10.16□□□□□ -0.78
TDP1-202ENST00000393452 NAA15Q9BXJ9 866 aaKnown RBP10.16□□□□□ -0.78
TDP1-202ENST00000393452 PSTPIP2Q9H939 334 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 BLOC1S4Q9NUP1 217 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 LRWD1Q9UFC0 647 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 PPP2R2CQ9Y2T4 447 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 TRIM49BA6NDI0 452 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 PSMA7O14818 248 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 N4BP3O15049 544 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 MFAP3LO75121 409 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 GYPCP04921 128 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 GCFC2P16383 781 aaKnown RBP10.16□□□□□ -0.78
TDP1-202ENST00000393452 TNNI2P48788 182 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 AMPD3Q01432 767 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 NCBP1Q09161 790 aaKnown RBP10.16□□□□□ -0.78
TDP1-202ENST00000393452 STIM1Q13586 685 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 SEPT2Q15019 361 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 EZH2Q15910 746 aaKnown RBP10.16□□□□□ -0.78
TDP1-202ENST00000393452 UBE2SQ16763 222 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 TMEM266Q2M3C6 531 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 QRICH1Q2TAL8 776 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 GRIPAP1Q4V328 841 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 SLFN13Q68D06 897 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 SYT10Q6XYQ8 523 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 ZSCAN29Q8IWY8 852 aaPredicted RBP10.16□□□□□ -0.78
TDP1-202ENST00000393452 GMCL1P1Q8NEA9 526 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 ANKRD20A12PQ8NF67 263 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 RAB34Q9BZG1 259 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 THAP9Q9H5L6 903 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 TDRD3Q9H7E2 651 aaKnown RBP10.16□□□□□ -0.78
TDP1-202ENST00000393452 PHLPP2Q6ZVD8 1323 aa10.16□□□□□ -0.78
TDP1-202ENST00000393452 GOLGA6L9A6NEM1 432 aa10.15□□□□□ -0.78
TDP1-202ENST00000393452 EEF1GP26641 437 aaKnown RBP10.15□□□□□ -0.78
TDP1-202ENST00000393452 CCT6AP40227 531 aaKnown RBP10.15□□□□□ -0.78
TDP1-202ENST00000393452 PPP1R2P41236 205 aa10.15□□□□□ -0.78
TDP1-202ENST00000393452 ICA1Q05084 483 aa10.15□□□□□ -0.78
TDP1-202ENST00000393452 CCDC93Q567U6 631 aa10.15□□□□□ -0.78
TDP1-202ENST00000393452 CNNM4Q6P4Q7 775 aa10.15□□□□□ -0.78
TDP1-202ENST00000393452 PPFIBP1Q86W92 1011 aa10.15□□□□□ -0.78
TDP1-202ENST00000393452 HAS1Q92839 578 aa10.15□□□□□ -0.78
TDP1-202ENST00000393452 CCDC51Q96ER9 411 aa10.15□□□□□ -0.78
TDP1-202ENST00000393452 GMCL1Q96IK5 515 aa10.15□□□□□ -0.78
TDP1-202ENST00000393452 PRMT6Q96LA8 375 aaPredicted RBP10.15□□□□□ -0.78
TDP1-202ENST00000393452 PNMA5Q96PV4 448 aa10.15□□□□□ -0.78
TDP1-202ENST00000393452 STK32BQ9NY57 414 aa10.15□□□□□ -0.78
TDP1-202ENST00000393452 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.15□□□□□ -0.78
TDP1-202ENST00000393452 PPIP5K2O43314 1243 aa10.15□□□□□ -0.79
TDP1-202ENST00000393452 ABCB5Q2M3G0 1257 aa10.15□□□□□ -0.79
TDP1-202ENST00000393452 CNGA4Q8IV77 575 aa10.15□□□□□ -0.79
TDP1-202ENST00000393452 NOC3LQ8WTT2 800 aaKnown RBP10.15□□□□□ -0.79
TDP1-202ENST00000393452 CCDC47Q96A33 483 aaKnown RBP10.15□□□□□ -0.79
TDP1-202ENST00000393452 NAP1L4Q99733 375 aaKnown RBP10.15□□□□□ -0.79
TDP1-202ENST00000393452 TRIM34Q9BYJ4 488 aa10.15□□□□□ -0.79
TDP1-202ENST00000393452 EXOC1Q9NV70 894 aa10.15□□□□□ -0.79
TDP1-202ENST00000393452 DDX25Q9UHL0 483 aaKnown RBP10.15□□□□□ -0.79
TDP1-202ENST00000393452 SYNPO2Q9UMS6 1093 aa10.15□□□□□ -0.79
TDP1-202ENST00000393452 PCDHA1Q9Y5I3 950 aa10.15□□□□□ -0.79
TDP1-202ENST00000393452 PVALEFA0A1B0GWK0 134 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 POTEMA6NI47 508 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 F5H6K3 240 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 FANCGO15287 622 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 CCNE1P24864 410 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 CASP14P31944 242 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 ASIC1P78348 528 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 EN1Q05925 392 aaPredicted RBP10.14□□□□□ -0.79
TDP1-202ENST00000393452 KLRC3Q07444 240 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 PDE4DQ08499 809 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 STK4Q13043 487 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 TRIM14Q14142 442 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 CDC37Q16543 378 aaPredicted RBP10.14□□□□□ -0.79
TDP1-202ENST00000393452 TMEM119Q4V9L6 283 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 TOGARAM2Q6ZUX3 1019 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 SV2BQ7L1I2 683 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 ZNF507Q8TCN5 953 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 LARP4BQ92615 738 aaKnown RBP10.14□□□□□ -0.79
TDP1-202ENST00000393452 DUSP9Q99956 384 aaKnown RBP10.14□□□□□ -0.79
TDP1-202ENST00000393452 TAB2Q9NYJ8 693 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 ZNF215Q9UL58 517 aaPredicted RBP10.14□□□□□ -0.79
TDP1-202ENST00000393452 CYP3A7-CYP3A51PA0A087WV96 503 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 BICDL2A1A5D9 508 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 C21orf2O43822 256 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 GDF11O95390 407 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 CYP3A7P24462 503 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 HOXA7P31268 230 aaPredicted RBP10.14□□□□□ -0.79
TDP1-202ENST00000393452 FXR1P51114 621 aaKnown RBP eCLIP10.14□□□□□ -0.79
TDP1-202ENST00000393452 USP11P51784 963 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 JAG1P78504 1218 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 MOXD1Q6UVY6 613 aa10.14□□□□□ -0.79
TDP1-202ENST00000393452 BTNL9Q6UXG8 535 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms