RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 DENND2CQ68D51 928 aa18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 LONP2Q86WA8 852 aa18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 RNF10Q8N5U6 811 aaKnown RBP18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 KAZALD1Q96I82 304 aa18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 VCPKMTQ9H867 229 aa18.7■□□□□ 0.58
TRAF3IP1-202ENST00000391993 ZNF18P17022 549 aa18.69■□□□□ 0.58
TRAF3IP1-202ENST00000391993 TXKP42681 527 aa18.69■□□□□ 0.58
TRAF3IP1-202ENST00000391993 SH3GL3Q99963 347 aa18.69■□□□□ 0.58
TRAF3IP1-202ENST00000391993 TMTC2Q8N394 836 aa18.69■□□□□ 0.58
TRAF3IP1-202ENST00000391993 ARHGEF10O15013 1369 aa18.69■□□□□ 0.58
TRAF3IP1-202ENST00000391993 ADGRB2O60241 1585 aa18.69■□□□□ 0.58
TRAF3IP1-202ENST00000391993 FAM107AO95990 144 aa18.69■□□□□ 0.58
TRAF3IP1-202ENST00000391993 AKNAD1Q5T1N1 836 aa18.69■□□□□ 0.58
TRAF3IP1-202ENST00000391993 DDX23Q9BUQ8 820 aaKnown RBP18.69■□□□□ 0.58
TRAF3IP1-202ENST00000391993 SEC31BQ9NQW1 1179 aa18.69■□□□□ 0.58
TRAF3IP1-202ENST00000391993 DDX20Q9UHI6 824 aaKnown RBP18.69■□□□□ 0.58
TRAF3IP1-202ENST00000391993 SETDB1Q15047 1291 aa18.68■□□□□ 0.58
TRAF3IP1-202ENST00000391993 MKNK2Q9HBH9 465 aa18.68■□□□□ 0.58
TRAF3IP1-202ENST00000391993 RWDD2AQ9UIY3 292 aa18.68■□□□□ 0.58
TRAF3IP1-202ENST00000391993 HPSEQ9Y251 543 aa18.68■□□□□ 0.58
TRAF3IP1-202ENST00000391993 ANP32DO95626 131 aa18.68■□□□□ 0.58
TRAF3IP1-202ENST00000391993 CRYMQ14894 314 aa18.68■□□□□ 0.58
TRAF3IP1-202ENST00000391993 ZNF449Q6P9G9 518 aa18.68■□□□□ 0.58
TRAF3IP1-202ENST00000391993 ARPP21Q9UBL0 812 aaPredicted RBP18.68■□□□□ 0.58
TRAF3IP1-202ENST00000391993 FBXL5Q9UKA1 691 aa18.68■□□□□ 0.58
TRAF3IP1-202ENST00000391993 NPHP4O75161 1426 aaPredicted RBP18.68■□□□□ 0.58
TRAF3IP1-202ENST00000391993 CETN3O15182 167 aa18.68■□□□□ 0.58
TRAF3IP1-202ENST00000391993 FAM47AQ5JRC9 791 aa18.68■□□□□ 0.58
TRAF3IP1-202ENST00000391993 SFMBT2Q5VUG0 894 aa18.68■□□□□ 0.58
TRAF3IP1-202ENST00000391993 DIXDC1Q155Q3 683 aa18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 NUGGCQ68CJ6 796 aa18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 HOOK3Q86VS8 718 aa18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 PYM1Q9BRP8 204 aaKnown RBP18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 INTUQ9ULD6 942 aa18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 YEATS2Q9ULM3 1422 aa18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 PRPF6O94906 941 aaKnown RBP18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 INF2Q27J81 1249 aa18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 ACCSLQ4AC99 568 aa18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 IFNL3Q8IZI9 196 aa18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 LSM14BQ9BX40 385 aaKnown RBP18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 EFCAB6Q5THR3 1501 aa18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 LGALS16A8MUM7 142 aa18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 PSMD14O00487 310 aa18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 GLI1P08151 1106 aa18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 SCTRP47872 440 aa18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 CCNHP51946 323 aaPredicted RBP18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 ZNF658Q5TYW1 1059 aaPredicted RBP18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 CAPN12Q6ZSI9 719 aa18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 FUKQ8N0W3 1084 aa18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 OSBPL1AQ9BXW6 950 aa18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 TRIM7Q9C029 511 aa18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 TBK1Q9UHD2 729 aa18.67■□□□□ 0.58
TRAF3IP1-202ENST00000391993 HERVK_113P62684 666 aa18.66■□□□□ 0.58
TRAF3IP1-202ENST00000391993 PPP2R2AP63151 447 aa18.66■□□□□ 0.58
TRAF3IP1-202ENST00000391993 THEMIS2Q5TEJ8 643 aa18.66■□□□□ 0.58
TRAF3IP1-202ENST00000391993 PARD3BQ8TEW8 1205 aa18.66■□□□□ 0.58
TRAF3IP1-202ENST00000391993 CAND2O75155 1236 aa18.66■□□□□ 0.58
TRAF3IP1-202ENST00000391993 FMNL1O95466 1100 aaPredicted RBP18.66■□□□□ 0.58
TRAF3IP1-202ENST00000391993 PDE6AP16499 860 aa18.66■□□□□ 0.58
TRAF3IP1-202ENST00000391993 GBP1P32455 592 aa18.66■□□□□ 0.58
TRAF3IP1-202ENST00000391993 FOXP1Q9H334 677 aaPredicted RBP18.66■□□□□ 0.58
TRAF3IP1-202ENST00000391993 TNKSO95271 1327 aa18.66■□□□□ 0.58
TRAF3IP1-202ENST00000391993 DAPK3O43293 454 aa18.66■□□□□ 0.58
TRAF3IP1-202ENST00000391993 GJC1P36383 396 aa18.66■□□□□ 0.58
TRAF3IP1-202ENST00000391993 SLC1A4P43007 532 aa18.66■□□□□ 0.58
TRAF3IP1-202ENST00000391993 AARSP49588 968 aaKnown RBP eCLIP18.66■□□□□ 0.58
TRAF3IP1-202ENST00000391993 SNX1Q13596 522 aa18.66■□□□□ 0.58
TRAF3IP1-202ENST00000391993 TSNAXIP1Q2TAA8 658 aa18.66■□□□□ 0.58
TRAF3IP1-202ENST00000391993 DNAAF5Q86Y56 855 aa18.66■□□□□ 0.58
TRAF3IP1-202ENST00000391993 TAOK3Q9H2K8 898 aa18.66■□□□□ 0.58
TRAF3IP1-202ENST00000391993 PNMA2Q9UL42 364 aa18.66■□□□□ 0.58
TRAF3IP1-202ENST00000391993 METP08581 1390 aa18.65■□□□□ 0.58
TRAF3IP1-202ENST00000391993 NEDD4P46934 1319 aa18.65■□□□□ 0.58
TRAF3IP1-202ENST00000391993 ZCWPW1Q9H0M4 648 aa18.65■□□□□ 0.58
TRAF3IP1-202ENST00000391993 ACTN4O43707 911 aaKnown RBP18.65■□□□□ 0.58
TRAF3IP1-202ENST00000391993 AMACRQ9UHK6 382 aa18.65■□□□□ 0.58
TRAF3IP1-202ENST00000391993 SPDYE3A6NKU9 549 aa18.65■□□□□ 0.58
TRAF3IP1-202ENST00000391993 LRRC53A6NM62 1247 aa18.65■□□□□ 0.58
TRAF3IP1-202ENST00000391993 IFNAR1P17181 557 aa18.65■□□□□ 0.58
TRAF3IP1-202ENST00000391993 PTPN22Q9Y2R2 807 aa18.65■□□□□ 0.58
TRAF3IP1-202ENST00000391993 SHROOM2Q13796 1616 aa18.65■□□□□ 0.58
TRAF3IP1-202ENST00000391993 CYP2D7A0A087X1C5 515 aa18.65■□□□□ 0.58
TRAF3IP1-202ENST00000391993 AGPSO00116 658 aa18.65■□□□□ 0.58
TRAF3IP1-202ENST00000391993 STX2P32856 288 aa18.65■□□□□ 0.58
TRAF3IP1-202ENST00000391993 IFI16Q16666 785 aaKnown RBP18.65■□□□□ 0.58
TRAF3IP1-202ENST00000391993 CUL5Q93034 780 aa18.65■□□□□ 0.58
TRAF3IP1-202ENST00000391993 INO80Q9ULG1 1556 aaPredicted RBP18.64■□□□□ 0.57
TRAF3IP1-202ENST00000391993 TRIM37O94972 964 aa18.64■□□□□ 0.57
TRAF3IP1-202ENST00000391993 NBPF9Q3BBW0 867 aa18.64■□□□□ 0.57
TRAF3IP1-202ENST00000391993 PREPLQ4J6C6 727 aaPredicted RBP18.64■□□□□ 0.57
TRAF3IP1-202ENST00000391993 FAM133AQ8N9E0 248 aa18.64■□□□□ 0.57
TRAF3IP1-202ENST00000391993 RETREG2Q8NC44 543 aa18.64■□□□□ 0.57
TRAF3IP1-202ENST00000391993 BABAM1Q9NWV8 329 aa18.64■□□□□ 0.57
TRAF3IP1-202ENST00000391993 LIMA1Q9UHB6 759 aaKnown RBP18.64■□□□□ 0.57
TRAF3IP1-202ENST00000391993 ANO9A1A5B4 782 aa18.64■□□□□ 0.57
TRAF3IP1-202ENST00000391993 TRADDQ15628 312 aa18.64■□□□□ 0.57
TRAF3IP1-202ENST00000391993 ASIC2Q16515 512 aa18.64■□□□□ 0.57
TRAF3IP1-202ENST00000391993 LMBR1Q8WVP7 490 aa18.64■□□□□ 0.57
TRAF3IP1-202ENST00000391993 MTRF1LQ9UGC7 380 aaKnown RBP18.64■□□□□ 0.57
TRAF3IP1-202ENST00000391993 RCCD1A6NED2 376 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms