RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 USP35Q9P2H5 1018 aa2.59□□□□□ -1.99
RNU6-440P-201ENST00000390882 DIS3Q9Y2L1 958 aaKnown RBP2.59□□□□□ -1.99
RNU6-440P-201ENST00000390882 ZNF451Q9Y4E5 1061 aa2.59□□□□□ -1.99
RNU6-440P-201ENST00000390882 PCDHB12Q9Y5F1 795 aa2.59□□□□□ -1.99
RNU6-440P-201ENST00000390882 SSU72P8A0A1W2PR75 194 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 SIGLEC6O43699 453 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 PPM1BO75688 479 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 GJB6O95452 261 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 ESR1P03372 595 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 ITGA4P13612 1032 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 NOP2P46087 812 aaKnown RBP2.58□□□□□ -2
RNU6-440P-201ENST00000390882 ZNF445P59923 1031 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 CAP1Q01518 475 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 SNW1Q13573 536 aaKnown RBP2.58□□□□□ -2
RNU6-440P-201ENST00000390882 DDR2Q16832 855 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 TIGD5Q53EQ6 642 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 TDRD10Q5VZ19 366 aaKnown RBP2.58□□□□□ -2
RNU6-440P-201ENST00000390882 EEPD1Q7L9B9 569 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 LRP10Q7Z4F1 713 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 TMC3Q7Z5M5 1100 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 SPPL2CQ8IUH8 684 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 USHBP1Q8N6Y0 703 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 ZNF655Q8N720 491 aaPredicted RBP2.58□□□□□ -2
RNU6-440P-201ENST00000390882 CELF2-AS1Q8N7Q2 184 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 PMFBP1Q8TBY8 1022 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 SYTL5Q8TDW5 730 aaPredicted RBP2.58□□□□□ -2
RNU6-440P-201ENST00000390882 DVL3Q92997 716 aaPredicted RBP2.58□□□□□ -2
RNU6-440P-201ENST00000390882 RCC1LQ96I51 464 aaKnown RBP2.58□□□□□ -2
RNU6-440P-201ENST00000390882 LOXL4Q96JB6 756 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 HAUS7Q99871 368 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 ZNF747Q9BV97 191 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 GBP3Q9H0R5 595 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 GP6Q9HCN6 339 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 CHST7Q9NS84 486 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 FAM86C1Q9NVL1 165 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 GFOD1Q9NXC2 390 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 WHRNQ9P202 907 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 HS3ST3A1Q9Y663 406 aa2.58□□□□□ -2
RNU6-440P-201ENST00000390882 SHISA3A0PJX4 238 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 WASH4PA8MWX3 477 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 NOP56O00567 594 aaKnown RBP2.57□□□□□ -2
RNU6-440P-201ENST00000390882 SHOXO15266 292 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 CBFA2T2O43439 604 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 PRAMEF1O95521 474 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 GSNP06396 782 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 EPHX1P07099 455 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 SERINC3Q13530 473 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 NFE2L2Q16236 605 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 GAB4Q2WGN9 574 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 SV2CQ496J9 727 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 NT5DC1Q5TFE4 455 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 RNF111Q6ZNA4 994 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 CREG2Q8IUH2 290 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 ARHGEF39Q8N4T4 335 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 LINC00116Q8NCU8 138 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 CHST13Q8NET6 341 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 MZB1Q8WU39 189 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 BRF1Q92994 677 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 ZNF669Q96BR6 464 aaPredicted RBP2.57□□□□□ -2
RNU6-440P-201ENST00000390882 SYTL4Q96C24 671 aaPredicted RBP2.57□□□□□ -2
RNU6-440P-201ENST00000390882 TCTN2Q96GX1 697 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 FGD4Q96M96 766 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 DSCC1Q9BVC3 393 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 HDAC8Q9BY41 377 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 KLHL25Q9H0H3 589 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 EPN3Q9H201 632 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 VPS11Q9H270 941 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 DLL4Q9NR61 685 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 SUSD2Q9UGT4 822 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 DUSP13Q9UII6 198 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 ING1Q9UK53 422 aaPredicted RBP2.57□□□□□ -2
RNU6-440P-201ENST00000390882 AKT3Q9Y243 479 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 SUGT1Q9Y2Z0 365 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 SF3B6Q9Y3B4 125 aaKnown RBP2.57□□□□□ -2
RNU6-440P-201ENST00000390882 MSRB2Q9Y3D2 182 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 FHOD1Q9Y613 1164 aa2.57□□□□□ -2
RNU6-440P-201ENST00000390882 IQCA1LA6NCM1 817 aa2.56□□□□□ -2
RNU6-440P-201ENST00000390882 B2RBV5 119 aa2.56□□□□□ -2
RNU6-440P-201ENST00000390882 AGRPO00253 132 aa2.56□□□□□ -2
RNU6-440P-201ENST00000390882 MEIS1O00470 390 aa2.56□□□□□ -2
RNU6-440P-201ENST00000390882 FFAR3O14843 346 aa2.56□□□□□ -2
RNU6-440P-201ENST00000390882 PDPK1O15530 556 aa2.56□□□□□ -2
RNU6-440P-201ENST00000390882 SUSD5O60279 629 aa2.56□□□□□ -2
RNU6-440P-201ENST00000390882 ZGLP1P0C6A0 271 aa2.56□□□□□ -2
RNU6-440P-201ENST00000390882 VAV1P15498 845 aa2.56□□□□□ -2
RNU6-440P-201ENST00000390882 BMP8BP34820 402 aa2.56□□□□□ -2
RNU6-440P-201ENST00000390882 PCBP3P57721 371 aaKnown RBP2.56□□□□□ -2
RNU6-440P-201ENST00000390882 POU4F1Q01851 419 aa2.56□□□□□ -2
RNU6-440P-201ENST00000390882 EGR3Q06889 387 aa2.56□□□□□ -2
RNU6-440P-201ENST00000390882 RASGRF1Q13972 1273 aa2.56□□□□□ -2
RNU6-440P-201ENST00000390882 PPP2R5DQ14738 602 aa2.56□□□□□ -2
RNU6-440P-201ENST00000390882 CCDC144BQ3MJ40 725 aa2.56□□□□□ -2
RNU6-440P-201ENST00000390882 CWF19L1Q69YN2 538 aaKnown RBP2.56□□□□□ -2
RNU6-440P-201ENST00000390882 MRM1Q6IN84 353 aaKnown RBP2.56□□□□□ -2
RNU6-440P-201ENST00000390882 POMZP3Q6PJE2 187 aa2.56□□□□□ -2
RNU6-440P-201ENST00000390882 DPH6Q7L8W6 267 aa2.56□□□□□ -2
RNU6-440P-201ENST00000390882 BHLHA9Q7RTU4 235 aa2.56□□□□□ -2
RNU6-440P-201ENST00000390882 CRACR2BQ8N4Y2 399 aaPredicted RBP2.56□□□□□ -2
RNU6-440P-201ENST00000390882 FIBCD1Q8N539 461 aa2.56□□□□□ -2
RNU6-440P-201ENST00000390882 ZNF513Q8N8E2 541 aaPredicted RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms