RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 ADGRB2O60241 1585 aa4.66□□□□□ -1.66
SMC6-202ENST00000381272 DNAJC25-GNG10A0A024R161 153 aa4.66□□□□□ -1.66
SMC6-202ENST00000381272 KRTAP4-8A0A0G2JLE6 195 aa4.66□□□□□ -1.66
SMC6-202ENST00000381272 RECKO95980 971 aa4.66□□□□□ -1.66
SMC6-202ENST00000381272 RAC2P15153 192 aa4.66□□□□□ -1.66
SMC6-202ENST00000381272 POLR2BP30876 1174 aaKnown RBP4.66□□□□□ -1.66
SMC6-202ENST00000381272 RIPK4P57078 832 aa4.66□□□□□ -1.66
SMC6-202ENST00000381272 EGR3Q06889 387 aa4.66□□□□□ -1.66
SMC6-202ENST00000381272 MVPQ14764 893 aaKnown RBP4.66□□□□□ -1.66
SMC6-202ENST00000381272 CLEC16AQ2KHT3 1053 aa4.66□□□□□ -1.66
SMC6-202ENST00000381272 RALGPS1Q5JS13 557 aa4.66□□□□□ -1.66
SMC6-202ENST00000381272 TTC6Q86TZ1 520 aa4.66□□□□□ -1.66
SMC6-202ENST00000381272 FTSJ3Q8IY81 847 aaKnown RBP4.66□□□□□ -1.66
SMC6-202ENST00000381272 SYTL4Q96C24 671 aaPredicted RBP4.66□□□□□ -1.66
SMC6-202ENST00000381272 KIRREL1Q96J84 757 aa4.66□□□□□ -1.66
SMC6-202ENST00000381272 RWDD1Q9H446 243 aaPredicted RBP4.66□□□□□ -1.66
SMC6-202ENST00000381272 SMC4Q9NTJ3 1288 aa4.66□□□□□ -1.66
SMC6-202ENST00000381272 SLC52A1Q9NWF4 448 aa4.66□□□□□ -1.66
SMC6-202ENST00000381272 FAM53CQ9NYF3 392 aa4.66□□□□□ -1.66
SMC6-202ENST00000381272 NOB1Q9ULX3 412 aaKnown RBP4.66□□□□□ -1.66
SMC6-202ENST00000381272 TMEM131LA2VDJ0 1609 aa4.66□□□□□ -1.66
SMC6-202ENST00000381272 ABCC11Q96J66 1382 aa4.66□□□□□ -1.66
SMC6-202ENST00000381272 PTPRMP28827 1452 aa4.66□□□□□ -1.66
SMC6-202ENST00000381272 MEIS3P2A8K0S8 358 aa4.65□□□□□ -1.66
SMC6-202ENST00000381272 IMPDH2P12268 514 aa4.65□□□□□ -1.66
SMC6-202ENST00000381272 NME1P15531 152 aaKnown RBP4.65□□□□□ -1.66
SMC6-202ENST00000381272 RBM25P49756 843 aaKnown RBP4.65□□□□□ -1.66
SMC6-202ENST00000381272 FYB2Q5VWT5 728 aa4.65□□□□□ -1.66
SMC6-202ENST00000381272 WAPLQ7Z5K2 1190 aa4.65□□□□□ -1.66
SMC6-202ENST00000381272 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.65□□□□□ -1.66
SMC6-202ENST00000381272 ENOX1Q8TC92 643 aaKnown RBP4.65□□□□□ -1.66
SMC6-202ENST00000381272 SSH1Q8WYL5 1049 aa4.65□□□□□ -1.66
SMC6-202ENST00000381272 TERF2IPQ9NYB0 399 aa4.65□□□□□ -1.66
SMC6-202ENST00000381272 DDX41Q9UJV9 622 aaKnown RBP4.65□□□□□ -1.66
SMC6-202ENST00000381272 PCDHA11Q9Y5I1 949 aa4.65□□□□□ -1.66
SMC6-202ENST00000381272 ANKRD26Q9UPS8 1709 aa4.65□□□□□ -1.66
SMC6-202ENST00000381272 ARHGAP31Q2M1Z3 1444 aa4.65□□□□□ -1.66
SMC6-202ENST00000381272 YTHDC2Q9H6S0 1430 aaKnown RBP4.65□□□□□ -1.66
SMC6-202ENST00000381272 COL3A1P02461 1466 aaPredicted RBP4.65□□□□□ -1.67
SMC6-202ENST00000381272 CD163L1Q9NR16 1453 aa4.65□□□□□ -1.67
SMC6-202ENST00000381272 KIF20BQ96Q89 1820 aa4.65□□□□□ -1.67
SMC6-202ENST00000381272 SHISA3A0PJX4 238 aa4.65□□□□□ -1.67
SMC6-202ENST00000381272 DIAPH1O60610 1272 aaKnown RBP4.65□□□□□ -1.67
SMC6-202ENST00000381272 CLEC3AO75596 197 aa4.65□□□□□ -1.67
SMC6-202ENST00000381272 GLI1P08151 1106 aa4.65□□□□□ -1.67
SMC6-202ENST00000381272 TRIM27P14373 513 aa4.65□□□□□ -1.67
SMC6-202ENST00000381272 YBX3P16989 372 aaKnown RBP eCLIP4.65□□□□□ -1.67
SMC6-202ENST00000381272 HK2P52789 917 aa4.65□□□□□ -1.67
SMC6-202ENST00000381272 NMIQ13287 307 aaPredicted RBP4.65□□□□□ -1.67
SMC6-202ENST00000381272 TMEM67Q5HYA8 995 aa4.65□□□□□ -1.67
SMC6-202ENST00000381272 NBPF12Q5TAG4 269 aaPredicted RBP4.65□□□□□ -1.67
SMC6-202ENST00000381272 HDGFL2Q7Z4V5 671 aaPredicted RBP4.65□□□□□ -1.67
SMC6-202ENST00000381272 ITPRIPQ8IWB1 547 aa4.65□□□□□ -1.67
SMC6-202ENST00000381272 RGS22Q8NE09 1264 aa4.65□□□□□ -1.67
SMC6-202ENST00000381272 MRRFQ96E11 262 aaKnown RBP4.65□□□□□ -1.67
SMC6-202ENST00000381272 SLKQ9H2G2 1235 aaPredicted RBP4.65□□□□□ -1.67
SMC6-202ENST00000381272 ADAMTS10Q9H324 1103 aa4.65□□□□□ -1.67
SMC6-202ENST00000381272 ANTXR1Q9H6X2 564 aa4.65□□□□□ -1.67
SMC6-202ENST00000381272 ZNRF3Q9ULT6 936 aa4.65□□□□□ -1.67
SMC6-202ENST00000381272 ZFYVE9O95405 1425 aa4.64□□□□□ -1.67
SMC6-202ENST00000381272 NLRP1Q9C000 1473 aa4.64□□□□□ -1.67
SMC6-202ENST00000381272 ALKQ9UM73 1620 aa4.64□□□□□ -1.67
SMC6-202ENST00000381272 ZNF503-AS2A6NEH8 195 aa4.64□□□□□ -1.67
SMC6-202ENST00000381272 LRRC10BA6NIK2 292 aa4.64□□□□□ -1.67
SMC6-202ENST00000381272 TNFRSF10CO14798 259 aa4.64□□□□□ -1.67
SMC6-202ENST00000381272 RACK1P63244 317 aaKnown RBP4.64□□□□□ -1.67
SMC6-202ENST00000381272 BECN1Q14457 450 aa4.64□□□□□ -1.67
SMC6-202ENST00000381272 NBPF9Q3BBW0 867 aa4.64□□□□□ -1.67
SMC6-202ENST00000381272 ZNF654Q8IZM8 581 aa4.64□□□□□ -1.67
SMC6-202ENST00000381272 TMEM57Q8N5G2 664 aa4.64□□□□□ -1.67
SMC6-202ENST00000381272 DHX38Q92620 1227 aaKnown RBP4.64□□□□□ -1.67
SMC6-202ENST00000381272 FERD3LQ96RJ6 166 aa4.64□□□□□ -1.67
SMC6-202ENST00000381272 CLTCQ00610 1675 aaKnown RBP4.64□□□□□ -1.67
SMC6-202ENST00000381272 MAP2P11137 1827 aaKnown RBP4.64□□□□□ -1.67
SMC6-202ENST00000381272 TSPOAP1O95153 1857 aa4.64□□□□□ -1.67
SMC6-202ENST00000381272 FARP2O94887 1054 aaPredicted RBP4.63□□□□□ -1.67
SMC6-202ENST00000381272 HMOX1P09601 288 aa4.63□□□□□ -1.67
SMC6-202ENST00000381272 PRKAR2BP31323 418 aa4.63□□□□□ -1.67
SMC6-202ENST00000381272 INTS3Q68E01 1043 aaKnown RBP4.63□□□□□ -1.67
SMC6-202ENST00000381272 CYB5RLQ6IPT4 315 aa4.63□□□□□ -1.67
SMC6-202ENST00000381272 MPZL3Q6UWV2 235 aa4.63□□□□□ -1.67
SMC6-202ENST00000381272 ATF7IPQ6VMQ6 1270 aa4.63□□□□□ -1.67
SMC6-202ENST00000381272 KRTAP19-1Q8IUB9 90 aa4.63□□□□□ -1.67
SMC6-202ENST00000381272 ABHD4Q8TB40 342 aa4.63□□□□□ -1.67
SMC6-202ENST00000381272 SYTL5Q8TDW5 730 aaPredicted RBP4.63□□□□□ -1.67
SMC6-202ENST00000381272 MYLIPQ8WY64 445 aa4.63□□□□□ -1.67
SMC6-202ENST00000381272 PHACTR3Q96KR7 559 aa4.63□□□□□ -1.67
SMC6-202ENST00000381272 DHRS1Q96LJ7 313 aa4.63□□□□□ -1.67
SMC6-202ENST00000381272 THUMPD2Q9BTF0 503 aaKnown RBP4.63□□□□□ -1.67
SMC6-202ENST00000381272 UPF2Q9HAU5 1272 aaKnown RBP4.63□□□□□ -1.67
SMC6-202ENST00000381272 CT47B1P0C2W7 299 aaPredicted RBP4.62□□□□□ -1.67
SMC6-202ENST00000381272 FBXW10Q5XX13 1052 aa4.62□□□□□ -1.67
SMC6-202ENST00000381272 METTL16Q86W50 562 aaKnown RBP4.62□□□□□ -1.67
SMC6-202ENST00000381272 OXR1Q8N573 874 aa4.62□□□□□ -1.67
SMC6-202ENST00000381272 ZNF655Q8N720 491 aaPredicted RBP4.62□□□□□ -1.67
SMC6-202ENST00000381272 DAGLBQ8NCG7 672 aa4.62□□□□□ -1.67
SMC6-202ENST00000381272 PDZD8Q8NEN9 1154 aa4.62□□□□□ -1.67
SMC6-202ENST00000381272 LIN37Q96GY3 246 aaPredicted RBP4.62□□□□□ -1.67
SMC6-202ENST00000381272 SPATA32Q96LK8 384 aa4.62□□□□□ -1.67
SMC6-202ENST00000381272 SLC6A18Q96N87 628 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms