RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 PBX2P40425 430 aa20.54■□□□□ 0.88
HLA-A-201ENST00000376802 PSMC6P62333 389 aa20.54■□□□□ 0.88
HLA-A-201ENST00000376802 DUSP28Q4G0W2 176 aa20.54■□□□□ 0.88
HLA-A-201ENST00000376802 AKNAD1Q5T1N1 836 aa20.54■□□□□ 0.88
HLA-A-201ENST00000376802 SLC30A10Q6XR72 485 aa20.54■□□□□ 0.88
HLA-A-201ENST00000376802 SMC5Q8IY18 1101 aa20.54■□□□□ 0.88
HLA-A-201ENST00000376802 TIFAQ96CG3 184 aa20.54■□□□□ 0.88
HLA-A-201ENST00000376802 PBX4Q9BYU1 374 aa20.54■□□□□ 0.88
HLA-A-201ENST00000376802 TRPV6Q9H1D0 765 aa20.54■□□□□ 0.88
HLA-A-201ENST00000376802 ZNF576Q9H609 170 aa20.54■□□□□ 0.88
HLA-A-201ENST00000376802 RBM47A0AV96 593 aaKnown RBP20.53■□□□□ 0.88
HLA-A-201ENST00000376802 TRIM6-TRIM34B2RNG4 842 aa20.53■□□□□ 0.88
HLA-A-201ENST00000376802 ZNF543Q08ER8 600 aa20.53■□□□□ 0.88
HLA-A-201ENST00000376802 MFSD6Q6ZSS7 791 aa20.53■□□□□ 0.88
HLA-A-201ENST00000376802 HIPK3Q9H422 1215 aa20.53■□□□□ 0.88
HLA-A-201ENST00000376802 IL23AQ9NPF7 189 aa20.53■□□□□ 0.88
HLA-A-201ENST00000376802 ADD3Q9UEY8 706 aaKnown RBP20.53■□□□□ 0.88
HLA-A-201ENST00000376802 LOC102724159A0A0B4J2E5 919 aa20.53■□□□□ 0.88
HLA-A-201ENST00000376802 PTPDC1A2A3K4 754 aa20.53■□□□□ 0.88
HLA-A-201ENST00000376802 ZEB2O60315 1214 aa20.53■□□□□ 0.88
HLA-A-201ENST00000376802 B4GALT4O60513 344 aa20.53■□□□□ 0.88
HLA-A-201ENST00000376802 PCP11498 1178 aaKnown RBP20.53■□□□□ 0.88
HLA-A-201ENST00000376802 PWP2Q15269 919 aaKnown RBP20.53■□□□□ 0.88
HLA-A-201ENST00000376802 PSRC1Q6PGN9 363 aaPredicted RBP20.53■□□□□ 0.88
HLA-A-201ENST00000376802 HERVK_113Q902F9 699 aa20.53■□□□□ 0.88
HLA-A-201ENST00000376802 RILPL2Q969X0 211 aa20.53■□□□□ 0.88
HLA-A-201ENST00000376802 NOC4LQ9BVI4 516 aaKnown RBP20.53■□□□□ 0.88
HLA-A-201ENST00000376802 SEZ6LQ9BYH1 1024 aa20.53■□□□□ 0.88
HLA-A-201ENST00000376802 WDR11Q9BZH6 1224 aa20.53■□□□□ 0.88
HLA-A-201ENST00000376802 CXXC1Q9P0U4 656 aaPredicted RBP20.53■□□□□ 0.88
HLA-A-201ENST00000376802 CHD7Q9P2D1 2997 aa20.52■□□□□ 0.87
HLA-A-201ENST00000376802 SDSP20132 328 aa20.52■□□□□ 0.87
HLA-A-201ENST00000376802 RNF207Q6ZRF8 634 aa20.52■□□□□ 0.87
HLA-A-201ENST00000376802 PLEKHM2Q8IWE5 1019 aa20.52■□□□□ 0.87
HLA-A-201ENST00000376802 VWCEQ96DN2 955 aa20.52■□□□□ 0.87
HLA-A-201ENST00000376802 WNT8AQ9H1J5 351 aa20.52■□□□□ 0.87
HLA-A-201ENST00000376802 SCN10AQ9Y5Y9 1956 aa20.51■□□□□ 0.87
HLA-A-201ENST00000376802 NEDD4P46934 1319 aa20.51■□□□□ 0.87
HLA-A-201ENST00000376802 IGHDP01880 384 aa20.51■□□□□ 0.87
HLA-A-201ENST00000376802 CALML3P27482 149 aa20.51■□□□□ 0.87
HLA-A-201ENST00000376802 RPS6P62753 249 aaKnown RBP20.51■□□□□ 0.87
HLA-A-201ENST00000376802 PURAQ00577 322 aaKnown RBP20.51■□□□□ 0.87
HLA-A-201ENST00000376802 USP38Q8NB14 1042 aa20.51■□□□□ 0.87
HLA-A-201ENST00000376802 ALDH8A1Q9H2A2 487 aaPredicted RBP20.51■□□□□ 0.87
HLA-A-201ENST00000376802 OSBPL3Q9H4L5 887 aa20.51■□□□□ 0.87
HLA-A-201ENST00000376802 WDR19Q8NEZ3 1342 aa20.5■□□□□ 0.87
HLA-A-201ENST00000376802 TTC28Q96AY4 2481 aa20.5■□□□□ 0.87
HLA-A-201ENST00000376802 SCN5AQ14524 2016 aa20.5■□□□□ 0.87
HLA-A-201ENST00000376802 FGBP02675 491 aa20.5■□□□□ 0.87
HLA-A-201ENST00000376802 EDNRBP24530 442 aa20.5■□□□□ 0.87
HLA-A-201ENST00000376802 CCL23P55773 120 aa20.5■□□□□ 0.87
HLA-A-201ENST00000376802 B4GALNT3Q6L9W6 998 aa20.5■□□□□ 0.87
HLA-A-201ENST00000376802 ZKSCAN3Q9BRR0 538 aa20.5■□□□□ 0.87
HLA-A-201ENST00000376802 CPVLQ9H3G5 476 aa20.5■□□□□ 0.87
HLA-A-201ENST00000376802 MYH6P13533 1939 aa20.49■□□□□ 0.87
HLA-A-201ENST00000376802 GOLGA8HP0CJ92 632 aa20.49■□□□□ 0.87
HLA-A-201ENST00000376802 NUCB1Q02818 461 aa20.49■□□□□ 0.87
HLA-A-201ENST00000376802 AAMPQ13685 434 aa20.49■□□□□ 0.87
HLA-A-201ENST00000376802 CHD1LQ86WJ1 897 aa20.49■□□□□ 0.87
HLA-A-201ENST00000376802 DGKHQ86XP1 1220 aa20.49■□□□□ 0.87
HLA-A-201ENST00000376802 ESR2Q92731 530 aa20.49■□□□□ 0.87
HLA-A-201ENST00000376802 RWDD1Q9H446 243 aaPredicted RBP20.49■□□□□ 0.87
HLA-A-201ENST00000376802 RNF41Q9H4P4 317 aaPredicted RBP20.49■□□□□ 0.87
HLA-A-201ENST00000376802 PNMA2Q9UL42 364 aa20.49■□□□□ 0.87
HLA-A-201ENST00000376802 ZNF213O14771 459 aa20.48■□□□□ 0.87
HLA-A-201ENST00000376802 GPATCH4Q5T3I0 446 aaKnown RBP20.48■□□□□ 0.87
HLA-A-201ENST00000376802 OTOP2Q7RTS6 562 aa20.48■□□□□ 0.87
HLA-A-201ENST00000376802 DNERQ8NFT8 737 aa20.48■□□□□ 0.87
HLA-A-201ENST00000376802 UBA5Q9GZZ9 404 aa20.48■□□□□ 0.87
HLA-A-201ENST00000376802 TRMT13Q9NUP7 481 aaKnown RBP20.48■□□□□ 0.87
HLA-A-201ENST00000376802 POLR3EQ9NVU0 708 aa20.48■□□□□ 0.87
HLA-A-201ENST00000376802 CPT1AP50416 773 aa20.47■□□□□ 0.87
HLA-A-201ENST00000376802 MFAP1P55081 439 aaKnown RBP20.47■□□□□ 0.87
HLA-A-201ENST00000376802 PDE4DQ08499 809 aa20.47■□□□□ 0.87
HLA-A-201ENST00000376802 RGS22Q8NE09 1264 aa20.47■□□□□ 0.87
HLA-A-201ENST00000376802 ANKS1AQ92625 1134 aa20.47■□□□□ 0.87
HLA-A-201ENST00000376802 PRDM12Q9H4Q4 367 aa20.47■□□□□ 0.87
HLA-A-201ENST00000376802 KIAA1217Q5T5P2 1943 aa20.47■□□□□ 0.87
HLA-A-201ENST00000376802 KDM4AO75164 1064 aa20.46■□□□□ 0.87
HLA-A-201ENST00000376802 MYL3P08590 195 aa20.46■□□□□ 0.87
HLA-A-201ENST00000376802 CYP2C9P11712 490 aa20.46■□□□□ 0.87
HLA-A-201ENST00000376802 USH1GQ495M9 461 aa20.46■□□□□ 0.87
HLA-A-201ENST00000376802 CWC27Q6UX04 472 aaKnown RBP20.46■□□□□ 0.87
HLA-A-201ENST00000376802 OR6J1Q8NGC5 347 aa20.46■□□□□ 0.87
HLA-A-201ENST00000376802 TBC1D5Q92609 795 aa20.46■□□□□ 0.87
HLA-A-201ENST00000376802 COPS5Q92905 334 aa20.46■□□□□ 0.87
HLA-A-201ENST00000376802 SCLYQ96I15 445 aa20.46■□□□□ 0.87
HLA-A-201ENST00000376802 YBX2Q9Y2T7 364 aaKnown RBP20.46■□□□□ 0.87
HLA-A-201ENST00000376802 TNKSO95271 1327 aa20.45■□□□□ 0.86
HLA-A-201ENST00000376802 REV3LO60673 3130 aa20.45■□□□□ 0.86
HLA-A-201ENST00000376802 A6NJR5 290 aa20.45■□□□□ 0.86
HLA-A-201ENST00000376802 NKRFO15226 690 aaKnown RBP eCLIP20.45■□□□□ 0.86
HLA-A-201ENST00000376802 ADGRE1Q14246 886 aa20.45■□□□□ 0.86
HLA-A-201ENST00000376802 RAB30Q15771 203 aa20.45■□□□□ 0.86
HLA-A-201ENST00000376802 NBPF20Q3BBV1 942 aa20.45■□□□□ 0.86
HLA-A-201ENST00000376802 PNMA1Q8ND90 353 aa20.45■□□□□ 0.86
HLA-A-201ENST00000376802 SCFD2Q8WU76 684 aa20.45■□□□□ 0.86
HLA-A-201ENST00000376802 PPP1R13LQ8WUF5 828 aa20.45■□□□□ 0.86
HLA-A-201ENST00000376802 MTG1Q9BT17 334 aaPredicted RBP20.45■□□□□ 0.86
HLA-A-201ENST00000376802 MSRAQ9UJ68 235 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms