RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 NCAPH2Q6IBW4 605 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 ZNF713Q8N859 430 aaPredicted RBP11.93□□□□□ -0.5
ABCF1-202ENST00000376545 KIAA0895Q8NCT3 520 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 EHBP1Q8NDI1 1231 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 RPGRIP1Q96KN7 1286 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 CNOT6LQ96LI5 555 aaKnown RBP11.93□□□□□ -0.5
ABCF1-202ENST00000376545 C6orf50Q9HD87 102 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 GUCA1BQ9UMX6 200 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 C10orf71Q711Q0 1435 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 LRRC37AA6NMS7 1700 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 ATAD5Q96QE3 1844 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 TARSL2A2RTX5 802 aaKnown RBP11.93□□□□□ -0.5
ABCF1-202ENST00000376545 RCCD1A6NED2 376 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 LCA5LO95447 670 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 AMPD3Q01432 767 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 PDE4DQ08499 809 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 QSER1Q2KHR3 1735 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 ZNF804AQ7Z570 1209 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 SLC51AQ86UW1 340 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 PLIN2Q99541 437 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 NHEJ1Q9H9Q4 299 aaPredicted RBP11.93□□□□□ -0.5
ABCF1-202ENST00000376545 ANO9A1A5B4 782 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 ERICH4A6NGS2 130 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 CCNT1O60563 726 aaKnown RBP11.93□□□□□ -0.5
ABCF1-202ENST00000376545 ATP1A1P05023 1023 aaKnown RBP11.93□□□□□ -0.5
ABCF1-202ENST00000376545 GOLGA8HP0CJ92 632 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 CYLC1P35663 651 aaPredicted RBP11.93□□□□□ -0.5
ABCF1-202ENST00000376545 FXR2P51116 673 aaKnown RBP eCLIP11.93□□□□□ -0.51e-6■■■□□ 17.3
ABCF1-202ENST00000376545 NAPAP54920 295 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 HNRNPH2P55795 449 aaKnown RBP11.93□□□□□ -0.5
ABCF1-202ENST00000376545 CCDC24Q8N4L8 307 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 EYA3Q99504 573 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 SEMA6BQ9H3T3 888 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 VIPAS39Q9H9C1 493 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 PDE11AQ9HCR9 933 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 BLOC1S4Q9NUP1 217 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 STX8Q9UNK0 236 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 SAR1BQ9Y6B6 198 aa11.93□□□□□ -0.5
ABCF1-202ENST00000376545 GREB1LQ9C091 1923 aaPredicted RBP11.93□□□□□ -0.5
ABCF1-202ENST00000376545 GNPATO15228 680 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 RHOXF2BP0C7M4 288 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 FCER1AP12319 257 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 RHBDL3P58872 404 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 TBC1D8BQ0IIM8 1120 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 CASP8Q14790 479 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 NFIXQ14938 502 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 CCDC122Q5T0U0 273 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 ZNF572Q7Z3I7 529 aaPredicted RBP11.92□□□□□ -0.5
ABCF1-202ENST00000376545 CCDC47Q96A33 483 aaKnown RBP11.92□□□□□ -0.5
ABCF1-202ENST00000376545 RHOXF2Q9BQY4 288 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 RTCBQ9Y3I0 505 aaKnown RBP11.92□□□□□ -0.5
ABCF1-202ENST00000376545 GAKO14976 1311 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 PVALEFA0A1B0GWK0 134 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 TULP2O00295 520 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 KRT86O43790 486 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 KLK7P49862 253 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 EHHADHQ08426 723 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 GRB10Q13322 594 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 VPS72Q15906 364 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 TSR1Q2NL82 804 aaKnown RBP11.92□□□□□ -0.5
ABCF1-202ENST00000376545 MAPKAPK5Q8IW41 473 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 RASSF8Q8NHQ8 419 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 RRP36Q96EU6 259 aaKnown RBP11.92□□□□□ -0.5
ABCF1-202ENST00000376545 LACRTQ9GZZ8 138 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 SUGCTQ9HAC7 445 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 ANKIB1Q9P2G1 1089 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 STK17AQ9UEE5 414 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 SIK3Q9Y2K2 1263 aa11.92□□□□□ -0.5
ABCF1-202ENST00000376545 NKRFO15226 690 aaKnown RBP eCLIP11.91□□□□□ -0.5
ABCF1-202ENST00000376545 BTDP43251 543 aa11.91□□□□□ -0.5
ABCF1-202ENST00000376545 GPS2Q13227 327 aa11.91□□□□□ -0.5
ABCF1-202ENST00000376545 FAM98CQ17RN3 349 aaKnown RBP11.91□□□□□ -0.5
ABCF1-202ENST00000376545 LETM2Q2VYF4 491 aa11.91□□□□□ -0.5
ABCF1-202ENST00000376545 CERKQ8TCT0 537 aa11.91□□□□□ -0.5
ABCF1-202ENST00000376545 TBCKQ8TEA7 893 aa11.91□□□□□ -0.5
ABCF1-202ENST00000376545 PNMA5Q96PV4 448 aa11.91□□□□□ -0.5
ABCF1-202ENST00000376545 MMS19Q96T76 1030 aa11.91□□□□□ -0.5
ABCF1-202ENST00000376545 HDAC6Q9UBN7 1215 aa11.91□□□□□ -0.5
ABCF1-202ENST00000376545 PLAGL2Q9UPG8 496 aa11.91□□□□□ -0.5
ABCF1-202ENST00000376545 ZNF263O14978 683 aa11.91□□□□□ -0.5
ABCF1-202ENST00000376545 EIF3JO75822 258 aaKnown RBP11.91□□□□□ -0.5
ABCF1-202ENST00000376545 SNHG28P0DPA3 235 aa11.91□□□□□ -0.5
ABCF1-202ENST00000376545 TECP42680 631 aa11.91□□□□□ -0.5
ABCF1-202ENST00000376545 AARSP49588 968 aaKnown RBP eCLIP11.91□□□□□ -0.54e-6■■■□□ 17.5
ABCF1-202ENST00000376545 PDIA5Q14554 519 aa11.91□□□□□ -0.5
ABCF1-202ENST00000376545 USP17L2Q6R6M4 530 aa11.91□□□□□ -0.5
ABCF1-202ENST00000376545 JAKMIP2Q96AA8 810 aa11.91□□□□□ -0.5
ABCF1-202ENST00000376545 CPVLQ9H3G5 476 aa11.91□□□□□ -0.5
ABCF1-202ENST00000376545 CD209Q9NNX6 404 aa11.91□□□□□ -0.5
ABCF1-202ENST00000376545 TRIM21P19474 475 aaKnown RBP11.91□□□□□ -0.5
ABCF1-202ENST00000376545 VAV2P52735 878 aa11.91□□□□□ -0.5
ABCF1-202ENST00000376545 UNC13DQ70J99 1090 aa11.91□□□□□ -0.5
ABCF1-202ENST00000376545 CEP95Q96GE4 821 aa11.91□□□□□ -0.5
ABCF1-202ENST00000376545 NOC4LQ9BVI4 516 aaKnown RBP11.91□□□□□ -0.5
ABCF1-202ENST00000376545 SAP30BPQ9UHR5 308 aaKnown RBP11.91□□□□□ -0.5
ABCF1-202ENST00000376545 TFR2Q9UP52 801 aa11.91□□□□□ -0.5
ABCF1-202ENST00000376545 ZC3H4Q9UPT8 1303 aaKnown RBP11.9□□□□□ -0.5
ABCF1-202ENST00000376545 ARFGEF1Q9Y6D6 1849 aa11.9□□□□□ -0.5
ABCF1-202ENST00000376545 LRRIQ3A6PVS8 624 aaPredicted RBP11.9□□□□□ -0.5
ABCF1-202ENST00000376545 ENC1O14682 589 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms