RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 PNKPQ96T60 521 aa18.98■□□□□ 0.63
PHF1-202ENST00000374516 TUBB2BQ9BVA1 445 aa18.98■□□□□ 0.63
PHF1-202ENST00000374516 ZMYND12Q9H0C1 365 aa18.98■□□□□ 0.63
PHF1-202ENST00000374516 L1RE1Q9UN81 338 aa18.98■□□□□ 0.63
PHF1-202ENST00000374516 RAD21O60216 631 aa18.97■□□□□ 0.63
PHF1-202ENST00000374516 TUBB4BP68371 445 aa18.97■□□□□ 0.63
PHF1-202ENST00000374516 ZNF569Q5MCW4 686 aa18.97■□□□□ 0.63
PHF1-202ENST00000374516 C4orf32Q8N8J7 132 aa18.97■□□□□ 0.63
PHF1-202ENST00000374516 MRIQ9BWK5 157 aa18.97■□□□□ 0.63
PHF1-202ENST00000374516 LCMT1Q9UIC8 334 aa18.97■□□□□ 0.63
PHF1-202ENST00000374516 RGPD3A6NKT7 1758 aaPredicted RBP18.97■□□□□ 0.63
PHF1-202ENST00000374516 RGPD4Q7Z3J3 1758 aa18.97■□□□□ 0.63
PHF1-202ENST00000374516 FKBP1AP62942 108 aaKnown RBP18.97■□□□□ 0.63
PHF1-202ENST00000374516 MSL3Q8N5Y2 521 aaKnown RBP18.97■□□□□ 0.63
PHF1-202ENST00000374516 IQUBQ8NA54 791 aa18.97■□□□□ 0.63
PHF1-202ENST00000374516 RIOX1Q9H6W3 641 aa18.97■□□□□ 0.63
PHF1-202ENST00000374516 VPS18Q9P253 973 aa18.97■□□□□ 0.63
PHF1-202ENST00000374516 SERPINA10Q9UK55 444 aa18.97■□□□□ 0.63
PHF1-202ENST00000374516 MYO1CO00159 1063 aa18.96■□□□□ 0.63
PHF1-202ENST00000374516 SF3B2Q13435 895 aaKnown RBP18.96■□□□□ 0.63
PHF1-202ENST00000374516 SPATA1Q5VX52 437 aa18.96■□□□□ 0.63
PHF1-202ENST00000374516 TTBK2Q6IQ55 1244 aa18.96■□□□□ 0.63
PHF1-202ENST00000374516 GALNT17Q6IS24 598 aa18.96■□□□□ 0.63
PHF1-202ENST00000374516 DAGLBQ8NCG7 672 aa18.96■□□□□ 0.63
PHF1-202ENST00000374516 COA7Q96BR5 231 aa18.96■□□□□ 0.63
PHF1-202ENST00000374516 ERLIN1O75477 346 aa18.96■□□□□ 0.63
PHF1-202ENST00000374516 SLC16A2P36021 539 aa18.96■□□□□ 0.63
PHF1-202ENST00000374516 PBX1P40424 430 aa18.96■□□□□ 0.63
PHF1-202ENST00000374516 KIF4BQ2VIQ3 1234 aa18.96■□□□□ 0.63
PHF1-202ENST00000374516 TTLL6Q8N841 843 aa18.96■□□□□ 0.63
PHF1-202ENST00000374516 PAGE5Q96GU1 130 aa18.96■□□□□ 0.63
PHF1-202ENST00000374516 PRMT6Q96LA8 375 aaPredicted RBP18.96■□□□□ 0.63
PHF1-202ENST00000374516 IDI2Q9BXS1 227 aa18.96■□□□□ 0.63
PHF1-202ENST00000374516 TMEM60Q9H2L4 133 aa18.96■□□□□ 0.63
PHF1-202ENST00000374516 RASSF4Q9H2L5 321 aa18.96■□□□□ 0.63
PHF1-202ENST00000374516 ABCB6Q9NP58 842 aa18.96■□□□□ 0.63
PHF1-202ENST00000374516 PI4KBQ9UBF8 816 aa18.96■□□□□ 0.63
PHF1-202ENST00000374516 ADD3Q9UEY8 706 aaKnown RBP18.96■□□□□ 0.63
PHF1-202ENST00000374516 CTAGE9A4FU28 777 aa18.95■□□□□ 0.62
PHF1-202ENST00000374516 SNHG28P0DPA3 235 aa18.95■□□□□ 0.62
PHF1-202ENST00000374516 HDLBPQ00341 1268 aaKnown RBP18.95■□□□□ 0.62
PHF1-202ENST00000374516 CT47A1Q5JQC4 288 aaPredicted RBP18.95■□□□□ 0.62
PHF1-202ENST00000374516 SOGA3Q5TF21 947 aa18.95■□□□□ 0.62
PHF1-202ENST00000374516 KCTD1Q719H9 257 aa18.95■□□□□ 0.62
PHF1-202ENST00000374516 C6orf50Q9HD87 102 aa18.95■□□□□ 0.62
PHF1-202ENST00000374516 BIN2Q9UBW5 565 aaPredicted RBP18.95■□□□□ 0.62
PHF1-202ENST00000374516 RAD17O75943 681 aa18.95■□□□□ 0.62
PHF1-202ENST00000374516 SMARCA1P28370 1054 aa18.95■□□□□ 0.62
PHF1-202ENST00000374516 ASPRV1Q53RT3 343 aa18.95■□□□□ 0.62
PHF1-202ENST00000374516 CC2D2BQ6DHV5 1058 aa18.95■□□□□ 0.62
PHF1-202ENST00000374516 EHD4Q9H223 541 aa18.95■□□□□ 0.62
PHF1-202ENST00000374516 DHX36Q9H2U1 1008 aaKnown RBP18.95■□□□□ 0.62
PHF1-202ENST00000374516 TRIM66O15016 1216 aa18.94■□□□□ 0.62
PHF1-202ENST00000374516 DPEP1P16444 411 aa18.94■□□□□ 0.62
PHF1-202ENST00000374516 GNA11P29992 359 aa18.94■□□□□ 0.62
PHF1-202ENST00000374516 BAG6P46379 1132 aa18.94■□□□□ 0.62
PHF1-202ENST00000374516 MAPK8IP2Q13387 824 aaPredicted RBP18.94■□□□□ 0.62
PHF1-202ENST00000374516 LETM2Q2VYF4 491 aa18.94■□□□□ 0.62
PHF1-202ENST00000374516 CERKLQ49MI3 558 aaPredicted RBP18.94■□□□□ 0.62
PHF1-202ENST00000374516 SUPT20HQ8NEM7 779 aa18.94■□□□□ 0.62
PHF1-202ENST00000374516 SUGCTQ9HAC7 445 aa18.94■□□□□ 0.62
PHF1-202ENST00000374516 ZNF277Q9NRM2 450 aaPredicted RBP18.94■□□□□ 0.62
PHF1-202ENST00000374516 TMEM260Q9NX78 707 aa18.94■□□□□ 0.62
PHF1-202ENST00000374516 N4BP1O75113 896 aaKnown RBP18.94■□□□□ 0.62
PHF1-202ENST00000374516 MFAP3LO75121 409 aa18.94■□□□□ 0.62
PHF1-202ENST00000374516 EIF3JO75822 258 aaKnown RBP18.94■□□□□ 0.62
PHF1-202ENST00000374516 CASP14P31944 242 aa18.94■□□□□ 0.62
PHF1-202ENST00000374516 ZNF543Q08ER8 600 aa18.94■□□□□ 0.62
PHF1-202ENST00000374516 CCDC96Q2M329 555 aa18.94■□□□□ 0.62
PHF1-202ENST00000374516 C10orf67Q8IYJ2 551 aa18.94■□□□□ 0.62
PHF1-202ENST00000374516 ADGRF4Q8IZF3 695 aa18.94■□□□□ 0.62
PHF1-202ENST00000374516 CTAGE1Q96RT6 745 aa18.94■□□□□ 0.62
PHF1-202ENST00000374516 MYH8P13535 1937 aa18.93■□□□□ 0.62
PHF1-202ENST00000374516 MYO3BQ8WXR4 1341 aa18.93■□□□□ 0.62
PHF1-202ENST00000374516 PP2D1A8MPX8 630 aa18.93■□□□□ 0.62
PHF1-202ENST00000374516 CD44P16070 742 aaKnown RBP18.93■□□□□ 0.62
PHF1-202ENST00000374516 STX17P56962 302 aa18.93■□□□□ 0.62
PHF1-202ENST00000374516 ARL6IP4Q66PJ3 421 aaKnown RBP18.93■□□□□ 0.62
PHF1-202ENST00000374516 KLHL10Q6JEL2 608 aa18.93■□□□□ 0.62
PHF1-202ENST00000374516 LEKR1Q6ZMV7 388 aa18.93■□□□□ 0.62
PHF1-202ENST00000374516 SRLQ86TD4 932 aa18.93■□□□□ 0.62
PHF1-202ENST00000374516 SLC35F6Q8N357 371 aa18.93■□□□□ 0.62
PHF1-202ENST00000374516 JMJD4Q9H9V9 463 aa18.93■□□□□ 0.62
PHF1-202ENST00000374516 CCNT1O60563 726 aaKnown RBP18.92■□□□□ 0.62
PHF1-202ENST00000374516 GDF11O95390 407 aa18.92■□□□□ 0.62
PHF1-202ENST00000374516 RHOXF2BP0C7M4 288 aa18.92■□□□□ 0.62
PHF1-202ENST00000374516 EEF2P13639 858 aaKnown RBP18.92■□□□□ 0.62
PHF1-202ENST00000374516 KCNA3P22001 575 aa18.92■□□□□ 0.62
PHF1-202ENST00000374516 CUL4BQ13620 913 aa18.92■□□□□ 0.62
PHF1-202ENST00000374516 CDKAL1Q5VV42 579 aa18.92■□□□□ 0.62
PHF1-202ENST00000374516 DTHD1Q6ZMT9 781 aa18.92■□□□□ 0.62
PHF1-202ENST00000374516 SH3RF1Q7Z6J0 888 aa18.92■□□□□ 0.62
PHF1-202ENST00000374516 CCDC17Q96LX7 622 aa18.92■□□□□ 0.62
PHF1-202ENST00000374516 RHOXF2Q9BQY4 288 aa18.92■□□□□ 0.62
PHF1-202ENST00000374516 BLZF1Q9H2G9 400 aa18.92■□□□□ 0.62
PHF1-202ENST00000374516 NONOQ15233 471 aaKnown RBP eCLIP18.92■□□□□ 0.621e-7■■■■□ 26.2
PHF1-202ENST00000374516 E2F4Q16254 413 aa18.92■□□□□ 0.62
PHF1-202ENST00000374516 FILIP1LQ4L180 1135 aa18.92■□□□□ 0.62
PHF1-202ENST00000374516 CNGA4Q8IV77 575 aa18.92■□□□□ 0.62
PHF1-202ENST00000374516 LARGE2Q8N3Y3 721 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms