RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 GPCPD1Q9NPB8 672 aa12.82□□□□□ -0.36
CSGALNACT2-201ENST00000374466 UBIAD1Q9Y5Z9 338 aa12.82□□□□□ -0.36
CSGALNACT2-201ENST00000374466 ARID2Q68CP9 1835 aa12.81□□□□□ -0.36
CSGALNACT2-201ENST00000374466 PXYLP1Q8TE99 480 aa12.81□□□□□ -0.36
CSGALNACT2-201ENST00000374466 POLR3EQ9NVU0 708 aa12.81□□□□□ -0.36
CSGALNACT2-201ENST00000374466 CHMP5Q9NZZ3 219 aa12.81□□□□□ -0.36
CSGALNACT2-201ENST00000374466 CCT2P78371 535 aaKnown RBP12.81□□□□□ -0.36
CSGALNACT2-201ENST00000374466 KCNV1Q6PIU1 500 aa12.8□□□□□ -0.36
CSGALNACT2-201ENST00000374466 RASGRP2Q7LDG7 609 aa12.8□□□□□ -0.36
CSGALNACT2-201ENST00000374466 C4orf32Q8N8J7 132 aa12.8□□□□□ -0.36
CSGALNACT2-201ENST00000374466 SYTL5Q8TDW5 730 aaPredicted RBP12.8□□□□□ -0.36
CSGALNACT2-201ENST00000374466 C8orf76Q96K31 380 aa12.8□□□□□ -0.36
CSGALNACT2-201ENST00000374466 FBXO28Q9NVF7 368 aa12.8□□□□□ -0.36
CSGALNACT2-201ENST00000374466 PCDHA1Q9Y5I3 950 aa12.8□□□□□ -0.36
CSGALNACT2-201ENST00000374466 SIP14410 1827 aa12.8□□□□□ -0.36
CSGALNACT2-201ENST00000374466 AKAP17AQ02040 695 aaKnown RBP12.8□□□□□ -0.36
CSGALNACT2-201ENST00000374466 CCDC84Q86UT8 332 aaPredicted RBP12.8□□□□□ -0.36
CSGALNACT2-201ENST00000374466 NOSTRINQ8IVI9 506 aa12.8□□□□□ -0.36
CSGALNACT2-201ENST00000374466 ABT1Q9ULW3 272 aaKnown RBP12.8□□□□□ -0.36
CSGALNACT2-201ENST00000374466 B4DLN1 442 aa12.8□□□□□ -0.36
CSGALNACT2-201ENST00000374466 RILPL1Q5EBL4 403 aa12.8□□□□□ -0.36
CSGALNACT2-201ENST00000374466 ARL6IP4Q66PJ3 421 aaKnown RBP12.8□□□□□ -0.36
CSGALNACT2-201ENST00000374466 ZNF579Q8NAF0 562 aaKnown RBP12.8□□□□□ -0.36
CSGALNACT2-201ENST00000374466 BRMS1Q9HCU9 246 aa12.8□□□□□ -0.36
CSGALNACT2-201ENST00000374466 GCOM1H8Y6P7 765 aaPredicted RBP12.79□□□□□ -0.36
CSGALNACT2-201ENST00000374466 POLR2MP0CAP2 368 aa12.79□□□□□ -0.36
CSGALNACT2-201ENST00000374466 SETQ01105 290 aaPredicted RBP12.79□□□□□ -0.36
CSGALNACT2-201ENST00000374466 RDM1Q8NG50 284 aa12.79□□□□□ -0.36
CSGALNACT2-201ENST00000374466 GPRASP2Q96D09 838 aa12.79□□□□□ -0.36
CSGALNACT2-201ENST00000374466 TRERF1Q96PN7 1200 aa12.79□□□□□ -0.36
CSGALNACT2-201ENST00000374466 RTEL1Q9NZ71 1219 aa12.79□□□□□ -0.36
CSGALNACT2-201ENST00000374466 CCPG1Q9ULG6 757 aa12.79□□□□□ -0.36
CSGALNACT2-201ENST00000374466 YEATS4O95619 227 aa12.79□□□□□ -0.36
CSGALNACT2-201ENST00000374466 F13A1P00488 732 aa12.79□□□□□ -0.36
CSGALNACT2-201ENST00000374466 GOLGA8HP0CJ92 632 aa12.79□□□□□ -0.36
CSGALNACT2-201ENST00000374466 CRHR2Q13324 411 aa12.79□□□□□ -0.36
CSGALNACT2-201ENST00000374466 ARHGEF6Q15052 776 aa12.79□□□□□ -0.36
CSGALNACT2-201ENST00000374466 CYP4F22Q6NT55 531 aa12.79□□□□□ -0.36
CSGALNACT2-201ENST00000374466 PHKBQ93100 1093 aa12.79□□□□□ -0.36
CSGALNACT2-201ENST00000374466 UBA5Q9GZZ9 404 aa12.79□□□□□ -0.36
CSGALNACT2-201ENST00000374466 MAP3K21Q5TCX8 1036 aa12.79□□□□□ -0.36
CSGALNACT2-201ENST00000374466 PLEKHH3Q7Z736 793 aa12.79□□□□□ -0.36
CSGALNACT2-201ENST00000374466 PSTPIP2Q9H939 334 aa12.79□□□□□ -0.36
CSGALNACT2-201ENST00000374466 KCNMB3Q9NPA1 279 aa12.79□□□□□ -0.36
CSGALNACT2-201ENST00000374466 ATP6V1DQ9Y5K8 247 aa12.79□□□□□ -0.36
CSGALNACT2-201ENST00000374466 PPP6R2O75170 966 aa12.78□□□□□ -0.36
CSGALNACT2-201ENST00000374466 ERO1AQ96HE7 468 aa12.78□□□□□ -0.36
CSGALNACT2-201ENST00000374466 INPP4AQ96PE3 977 aaPredicted RBP12.78□□□□□ -0.36
CSGALNACT2-201ENST00000374466 RNF146Q9NTX7 359 aa12.78□□□□□ -0.36
CSGALNACT2-201ENST00000374466 SMCHD1A6NHR9 2005 aa12.78□□□□□ -0.36
CSGALNACT2-201ENST00000374466 IGLV3-22A0A075B6J6 115 aa12.78□□□□□ -0.36
CSGALNACT2-201ENST00000374466 SMCO2A6NFE2 343 aa12.78□□□□□ -0.36
CSGALNACT2-201ENST00000374466 LACTBP83111 547 aaPredicted RBP12.78□□□□□ -0.36
CSGALNACT2-201ENST00000374466 MTMR9Q96QG7 549 aa12.78□□□□□ -0.36
CSGALNACT2-201ENST00000374466 A1CFQ9NQ94 594 aaKnown RBP12.78□□□□□ -0.36
CSGALNACT2-201ENST00000374466 PXMP2Q9NR77 195 aa12.78□□□□□ -0.36
CSGALNACT2-201ENST00000374466 TGFB3P10600 412 aa12.78□□□□□ -0.36
CSGALNACT2-201ENST00000374466 HYIQ5T013 277 aa12.78□□□□□ -0.36
CSGALNACT2-201ENST00000374466 SNRNP48Q6IEG0 339 aaKnown RBP12.78□□□□□ -0.36
CSGALNACT2-201ENST00000374466 VSIG10LQ86VR7 867 aa12.78□□□□□ -0.36
CSGALNACT2-201ENST00000374466 KIFC2Q96AC6 838 aa12.78□□□□□ -0.36
CSGALNACT2-201ENST00000374466 UPF3AQ9H1J1 476 aaKnown RBP12.78□□□□□ -0.36
CSGALNACT2-201ENST00000374466 VTA1Q9NP79 307 aa12.78□□□□□ -0.36
CSGALNACT2-201ENST00000374466 PPME1Q9Y570 386 aa12.78□□□□□ -0.36
CSGALNACT2-201ENST00000374466 NKRFO15226 690 aaKnown RBP eCLIP12.77□□□□□ -0.36
CSGALNACT2-201ENST00000374466 SLC16A2P36021 539 aa12.77□□□□□ -0.36
CSGALNACT2-201ENST00000374466 Q3C1V9 767 aa12.77□□□□□ -0.36
CSGALNACT2-201ENST00000374466 MUM1L1Q5H9M0 696 aa12.77□□□□□ -0.36
CSGALNACT2-201ENST00000374466 GPR142Q7Z601 462 aa12.77□□□□□ -0.36
CSGALNACT2-201ENST00000374466 SPICE1Q8N0Z3 855 aa12.77□□□□□ -0.36
CSGALNACT2-201ENST00000374466 STK11IPQ8N1F8 1099 aa12.77□□□□□ -0.36
CSGALNACT2-201ENST00000374466 REXO1Q8N1G1 1221 aaKnown RBP12.77□□□□□ -0.36
CSGALNACT2-201ENST00000374466 LENG9Q96B70 501 aa12.77□□□□□ -0.36
CSGALNACT2-201ENST00000374466 AGBL1Q96MI9 1066 aa12.77□□□□□ -0.36
CSGALNACT2-201ENST00000374466 SLC5A4Q9NY91 659 aa12.77□□□□□ -0.36
CSGALNACT2-201ENST00000374466 RIPK3Q9Y572 518 aa12.77□□□□□ -0.36
CSGALNACT2-201ENST00000374466 ASTN1O14525 1302 aa12.77□□□□□ -0.36
CSGALNACT2-201ENST00000374466 ASB14A6NK59 587 aa12.77□□□□□ -0.37
CSGALNACT2-201ENST00000374466 MAP2K5Q13163 448 aa12.77□□□□□ -0.37
CSGALNACT2-201ENST00000374466 SEMA3FQ13275 785 aa12.77□□□□□ -0.37
CSGALNACT2-201ENST00000374466 DGKZQ13574 1117 aa12.77□□□□□ -0.37
CSGALNACT2-201ENST00000374466 PTPAQ15257 358 aa12.77□□□□□ -0.37
CSGALNACT2-201ENST00000374466 LARP1BQ659C4 914 aaKnown RBP12.77□□□□□ -0.37
CSGALNACT2-201ENST00000374466 APBA2Q99767 749 aa12.77□□□□□ -0.37
CSGALNACT2-201ENST00000374466 SEZ6LQ9BYH1 1024 aa12.77□□□□□ -0.37
CSGALNACT2-201ENST00000374466 ZNF408Q9H9D4 720 aa12.77□□□□□ -0.37
CSGALNACT2-201ENST00000374466 ADD3Q9UEY8 706 aaKnown RBP12.77□□□□□ -0.37
CSGALNACT2-201ENST00000374466 RCOR1Q9UKL0 485 aa12.77□□□□□ -0.37
CSGALNACT2-201ENST00000374466 MEIS1O00470 390 aa12.77□□□□□ -0.37
CSGALNACT2-201ENST00000374466 TRIM29Q14134 588 aa12.77□□□□□ -0.37
CSGALNACT2-201ENST00000374466 TAF1CQ15572 869 aaPredicted RBP12.77□□□□□ -0.37
CSGALNACT2-201ENST00000374466 PKN2Q16513 984 aaKnown RBP12.77□□□□□ -0.37
CSGALNACT2-201ENST00000374466 MPHOSPH6Q99547 160 aaKnown RBP12.77□□□□□ -0.37
CSGALNACT2-201ENST00000374466 NAPAP54920 295 aa12.76□□□□□ -0.37
CSGALNACT2-201ENST00000374466 FCGRTP55899 365 aa12.76□□□□□ -0.37
CSGALNACT2-201ENST00000374466 PRDM10Q9NQV6 1147 aa12.76□□□□□ -0.37
CSGALNACT2-201ENST00000374466 ERCC3P19447 782 aa12.76□□□□□ -0.37
CSGALNACT2-201ENST00000374466 RXRAP19793 462 aa12.76□□□□□ -0.37
CSGALNACT2-201ENST00000374466 FXR2P51116 673 aaKnown RBP eCLIP12.76□□□□□ -0.37
CSGALNACT2-201ENST00000374466 PRKG1Q13976 671 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms