RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 EVI5LQ96CN4 794 aa16.28■□□□□ 0.2
CXCL12-202ENST00000374426 VWCEQ96DN2 955 aa16.28■□□□□ 0.2
CXCL12-202ENST00000374426 TMEM47Q9BQJ4 181 aa16.28■□□□□ 0.2
CXCL12-202ENST00000374426 MSRAQ9UJ68 235 aa16.28■□□□□ 0.2
CXCL12-202ENST00000374426 FRMPD2Q68DX3 1309 aaPredicted RBP16.27■□□□□ 0.2
CXCL12-202ENST00000374426 FGAP02671 866 aa16.27■□□□□ 0.2
CXCL12-202ENST00000374426 TOP1P11387 765 aaKnown RBP16.27■□□□□ 0.2
CXCL12-202ENST00000374426 ALDH5A1P51649 535 aaPredicted RBP16.27■□□□□ 0.2
CXCL12-202ENST00000374426 AKNAD1Q5T1N1 836 aa16.27■□□□□ 0.2
CXCL12-202ENST00000374426 ANKRD45Q5TZF3 282 aa16.27■□□□□ 0.2
CXCL12-202ENST00000374426 PPM1EQ8WY54 764 aa16.27■□□□□ 0.2
CXCL12-202ENST00000374426 FAM227BQ96M60 508 aa16.27■□□□□ 0.2
CXCL12-202ENST00000374426 ALDH8A1Q9H2A2 487 aaPredicted RBP16.27■□□□□ 0.2
CXCL12-202ENST00000374426 MTIF3Q9H2K0 278 aaKnown RBP16.27■□□□□ 0.2
CXCL12-202ENST00000374426 NKX2-4Q9H2Z4 354 aa16.27■□□□□ 0.2
CXCL12-202ENST00000374426 HELLSQ9NRZ9 838 aa16.27■□□□□ 0.2
CXCL12-202ENST00000374426 TOMM22Q9NS69 142 aa16.27■□□□□ 0.2
CXCL12-202ENST00000374426 ADD3Q9UEY8 706 aaKnown RBP16.27■□□□□ 0.2
CXCL12-202ENST00000374426 YBX2Q9Y2T7 364 aaKnown RBP16.27■□□□□ 0.2
CXCL12-202ENST00000374426 A0A0D9SFI3 127 aa16.26■□□□□ 0.19
CXCL12-202ENST00000374426 PDE1AP54750 535 aa16.26■□□□□ 0.19
CXCL12-202ENST00000374426 RRP12Q5JTH9 1297 aaKnown RBP16.26■□□□□ 0.19
CXCL12-202ENST00000374426 SLC30A10Q6XR72 485 aa16.26■□□□□ 0.19
CXCL12-202ENST00000374426 CLEC4DQ8WXI8 215 aa16.26■□□□□ 0.19
CXCL12-202ENST00000374426 WDR11Q9BZH6 1224 aa16.26■□□□□ 0.19
CXCL12-202ENST00000374426 GPCPD1Q9NPB8 672 aa16.26■□□□□ 0.19
CXCL12-202ENST00000374426 TCP11L1Q9NUJ3 509 aa16.26■□□□□ 0.19
CXCL12-202ENST00000374426 LOC102724159A0A0B4J2E5 919 aa16.25■□□□□ 0.19
CXCL12-202ENST00000374426 RBM47A0AV96 593 aaKnown RBP16.25■□□□□ 0.19
CXCL12-202ENST00000374426 PTPDC1A2A3K4 754 aa16.25■□□□□ 0.19
CXCL12-202ENST00000374426 PDHBP11177 359 aa16.25■□□□□ 0.19
CXCL12-202ENST00000374426 PURAQ00577 322 aaKnown RBP16.25■□□□□ 0.19
CXCL12-202ENST00000374426 PWP2Q15269 919 aaKnown RBP16.25■□□□□ 0.19
CXCL12-202ENST00000374426 ZNF589Q86UQ0 364 aaPredicted RBP16.25■□□□□ 0.19
CXCL12-202ENST00000374426 SCLYQ96I15 445 aa16.25■□□□□ 0.19
CXCL12-202ENST00000374426 SLC28A3Q9HAS3 691 aa16.25■□□□□ 0.19
CXCL12-202ENST00000374426 TRMT13Q9NUP7 481 aaKnown RBP16.25■□□□□ 0.19
CXCL12-202ENST00000374426 HSPD1P10809 573 aaKnown RBP16.24■□□□□ 0.19
CXCL12-202ENST00000374426 CYP2C9P11712 490 aa16.24■□□□□ 0.19
CXCL12-202ENST00000374426 CALML3P27482 149 aa16.24■□□□□ 0.19
CXCL12-202ENST00000374426 RABGGTBP53611 331 aa16.24■□□□□ 0.19
CXCL12-202ENST00000374426 MCMDC2Q4G0Z9 681 aa16.24■□□□□ 0.19
CXCL12-202ENST00000374426 RPUSD2Q8IZ73 545 aaKnown RBP16.24■□□□□ 0.19
CXCL12-202ENST00000374426 POLR3EQ9NVU0 708 aa16.24■□□□□ 0.19
CXCL12-202ENST00000374426 ZBTB47Q9UFB7 747 aaPredicted RBP16.24■□□□□ 0.19
CXCL12-202ENST00000374426 GBF1Q92538 1859 aa16.24■□□□□ 0.19
CXCL12-202ENST00000374426 TNKSO95271 1327 aa16.23■□□□□ 0.19
CXCL12-202ENST00000374426 ZMYM6O95789 1325 aa16.23■□□□□ 0.19
CXCL12-202ENST00000374426 SNHG28P0DPA3 235 aa16.23■□□□□ 0.19
CXCL12-202ENST00000374426 IGFBP4P22692 258 aa16.23■□□□□ 0.19
CXCL12-202ENST00000374426 EDNRBP24530 442 aa16.23■□□□□ 0.19
CXCL12-202ENST00000374426 CPT1AP50416 773 aa16.23■□□□□ 0.19
CXCL12-202ENST00000374426 HAND2P61296 217 aa16.23■□□□□ 0.19
CXCL12-202ENST00000374426 RPS6P62753 249 aaKnown RBP16.23■□□□□ 0.19
CXCL12-202ENST00000374426 ZNF543Q08ER8 600 aa16.23■□□□□ 0.19
CXCL12-202ENST00000374426 RNF207Q6ZRF8 634 aa16.23■□□□□ 0.19
CXCL12-202ENST00000374426 OR6J1Q8NGC5 347 aa16.23■□□□□ 0.19
CXCL12-202ENST00000374426 ATXN2LQ8WWM7 1075 aaKnown RBP16.23■□□□□ 0.19
CXCL12-202ENST00000374426 THEGQ9P2T0 379 aa16.23■□□□□ 0.19
CXCL12-202ENST00000374426 SLC4A7Q9Y6M7 1214 aa16.23■□□□□ 0.19
CXCL12-202ENST00000374426 MYL3P08590 195 aa16.22■□□□□ 0.19
CXCL12-202ENST00000374426 SUPT20HL2P0C7V6 817 aa16.22■□□□□ 0.19
CXCL12-202ENST00000374426 MYOGP15173 224 aa16.22■□□□□ 0.19
CXCL12-202ENST00000374426 RRP1P56182 461 aaKnown RBP16.22■□□□□ 0.19
CXCL12-202ENST00000374426 NMIQ13287 307 aaPredicted RBP16.22■□□□□ 0.19
CXCL12-202ENST00000374426 TTLL4Q14679 1199 aa16.22■□□□□ 0.19
CXCL12-202ENST00000374426 CCDC85BQ15834 202 aaPredicted RBP16.22■□□□□ 0.19
CXCL12-202ENST00000374426 TICAM2Q86XR7 235 aa16.22■□□□□ 0.19
CXCL12-202ENST00000374426 TBC1D10CQ8IV04 446 aa16.22■□□□□ 0.19
CXCL12-202ENST00000374426 TTC14Q96N46 770 aa16.22■□□□□ 0.19
CXCL12-202ENST00000374426 ASB2Q96Q27 587 aa16.22■□□□□ 0.19
CXCL12-202ENST00000374426 MTG1Q9BT17 334 aaPredicted RBP16.22■□□□□ 0.19
CXCL12-202ENST00000374426 SCN10AQ9Y5Y9 1956 aa16.22■□□□□ 0.19
CXCL12-202ENST00000374426 WDR19Q8NEZ3 1342 aa16.21■□□□□ 0.19
CXCL12-202ENST00000374426 ZBBXA8MT70 800 aa16.21■□□□□ 0.19
CXCL12-202ENST00000374426 TNFRSF10AO00220 468 aa16.21■□□□□ 0.19
CXCL12-202ENST00000374426 ATP2A2P16615 1042 aaKnown RBP16.21■□□□□ 0.19
CXCL12-202ENST00000374426 PDE4DQ08499 809 aa16.21■□□□□ 0.19
CXCL12-202ENST00000374426 HDAC1Q13547 482 aaPredicted RBP16.21■□□□□ 0.19
CXCL12-202ENST00000374426 PPP2R5BQ15173 497 aa16.21■□□□□ 0.19
CXCL12-202ENST00000374426 NBPF20Q3BBV1 942 aa16.21■□□□□ 0.19
CXCL12-202ENST00000374426 PPP2R2DQ66LE6 453 aa16.21■□□□□ 0.19
CXCL12-202ENST00000374426 DNERQ8NFT8 737 aa16.21■□□□□ 0.19
CXCL12-202ENST00000374426 PPP1R13LQ8WUF5 828 aa16.21■□□□□ 0.19
CXCL12-202ENST00000374426 COPS5Q92905 334 aa16.21■□□□□ 0.19
CXCL12-202ENST00000374426 CRBNQ96SW2 442 aa16.21■□□□□ 0.19
CXCL12-202ENST00000374426 GPHNQ9NQX3 736 aaPredicted RBP16.21■□□□□ 0.19
CXCL12-202ENST00000374426 PNMA2Q9UL42 364 aa16.21■□□□□ 0.19
CXCL12-202ENST00000374426 PCDHA11Q9Y5I1 949 aa16.21■□□□□ 0.19
CXCL12-202ENST00000374426 CCDC171Q6TFL3 1326 aa16.2■□□□□ 0.18
CXCL12-202ENST00000374426 A6NJR5 290 aa16.2■□□□□ 0.18
CXCL12-202ENST00000374426 NKRFO15226 690 aaKnown RBP eCLIP16.2■□□□□ 0.18
CXCL12-202ENST00000374426 PFKMP08237 780 aa16.2■□□□□ 0.18
CXCL12-202ENST00000374426 PCP11498 1178 aaKnown RBP16.2■□□□□ 0.18
CXCL12-202ENST00000374426 MFSD6Q6ZSS7 791 aa16.2■□□□□ 0.18
CXCL12-202ENST00000374426 DEFB128Q7Z7B8 93 aa16.2■□□□□ 0.18
CXCL12-202ENST00000374426 SCFD2Q8WU76 684 aa16.2■□□□□ 0.18
CXCL12-202ENST00000374426 RAD50Q92878 1312 aa16.19■□□□□ 0.18
CXCL12-202ENST00000374426 PRRC2BQ5JSZ5 2229 aaKnown RBP16.19■□□□□ 0.18
CXCL12-202ENST00000374426 ARIH2O95376 493 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms