RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 C21orf2O43822 256 aa17.94■□□□□ 0.46
CNKSR1-202ENST00000374253 URI1O94763 535 aaPredicted RBP17.94■□□□□ 0.46
CNKSR1-202ENST00000374253 SLU7O95391 586 aaKnown RBP17.94■□□□□ 0.46
CNKSR1-202ENST00000374253 GNG11P61952 73 aa17.94■□□□□ 0.46
CNKSR1-202ENST00000374253 GRB10Q13322 594 aa17.94■□□□□ 0.46
CNKSR1-202ENST00000374253 QSER1Q2KHR3 1735 aa17.94■□□□□ 0.46
CNKSR1-202ENST00000374253 GIMAP8Q8ND71 665 aaPredicted RBP17.94■□□□□ 0.46
CNKSR1-202ENST00000374253 SLC39A2Q9NP94 309 aa17.94■□□□□ 0.46
CNKSR1-202ENST00000374253 RHOBTB3O94955 611 aa17.94■□□□□ 0.46
CNKSR1-202ENST00000374253 ERCC3P19447 782 aa17.94■□□□□ 0.46
CNKSR1-202ENST00000374253 EN1Q05925 392 aaPredicted RBP17.94■□□□□ 0.46
CNKSR1-202ENST00000374253 EZH2Q15910 746 aaKnown RBP17.94■□□□□ 0.46
CNKSR1-202ENST00000374253 QRICH1Q2TAL8 776 aa17.94■□□□□ 0.46
CNKSR1-202ENST00000374253 CALML4Q96GE6 196 aa17.94■□□□□ 0.46
CNKSR1-202ENST00000374253 PSTPIP2Q9H939 334 aa17.94■□□□□ 0.46
CNKSR1-202ENST00000374253 RIC8AQ9NPQ8 531 aa17.94■□□□□ 0.46
CNKSR1-202ENST00000374253 EXOC1Q9NV70 894 aa17.94■□□□□ 0.46
CNKSR1-202ENST00000374253 CCP110O43303 1012 aa17.93■□□□□ 0.46
CNKSR1-202ENST00000374253 SLFN13Q68D06 897 aa17.93■□□□□ 0.46
CNKSR1-202ENST00000374253 KCNK18Q7Z418 384 aa17.93■□□□□ 0.46
CNKSR1-202ENST00000374253 SIAH1Q8IUQ4 282 aa17.93■□□□□ 0.46
CNKSR1-202ENST00000374253 CUL5Q93034 780 aa17.93■□□□□ 0.46
CNKSR1-202ENST00000374253 PRMT6Q96LA8 375 aaPredicted RBP17.93■□□□□ 0.46
CNKSR1-202ENST00000374253 PNMA5Q96PV4 448 aa17.93■□□□□ 0.46
CNKSR1-202ENST00000374253 PI4KBQ9UBF8 816 aa17.93■□□□□ 0.46
CNKSR1-202ENST00000374253 PSMA7O14818 248 aa17.93■□□□□ 0.46
CNKSR1-202ENST00000374253 MARCH6O60337 910 aa17.93■□□□□ 0.46
CNKSR1-202ENST00000374253 IKQ13123 557 aaPredicted RBP17.93■□□□□ 0.46
CNKSR1-202ENST00000374253 KCNB1Q14721 858 aa17.93■□□□□ 0.46
CNKSR1-202ENST00000374253 ZNF772Q68DY9 489 aaPredicted RBP17.93■□□□□ 0.46
CNKSR1-202ENST00000374253 SPICE1Q8N0Z3 855 aa17.93■□□□□ 0.46
CNKSR1-202ENST00000374253 SNX29Q8TEQ0 813 aa17.93■□□□□ 0.46
CNKSR1-202ENST00000374253 CDK5RAP3Q96JB5 506 aa17.93■□□□□ 0.46
CNKSR1-202ENST00000374253 BLOC1S4Q9NUP1 217 aa17.93■□□□□ 0.46
CNKSR1-202ENST00000374253 YDJCA8MPS7 323 aa17.92■□□□□ 0.46
CNKSR1-202ENST00000374253 ICA1Q05084 483 aa17.92■□□□□ 0.46
CNKSR1-202ENST00000374253 ECM1Q16610 540 aa17.92■□□□□ 0.46
CNKSR1-202ENST00000374253 ERCC6LQ2NKX8 1250 aa17.92■□□□□ 0.46
CNKSR1-202ENST00000374253 USH1GQ495M9 461 aa17.92■□□□□ 0.46
CNKSR1-202ENST00000374253 GPATCH4Q5T3I0 446 aaKnown RBP17.92■□□□□ 0.46
CNKSR1-202ENST00000374253 MTERF4Q7Z6M4 381 aaKnown RBP17.92■□□□□ 0.46
CNKSR1-202ENST00000374253 ANKRD20A12PQ8NF67 263 aa17.92■□□□□ 0.46
CNKSR1-202ENST00000374253 PANX2Q96RD6 677 aa17.92■□□□□ 0.46
CNKSR1-202ENST00000374253 DDX25Q9UHL0 483 aaKnown RBP17.92■□□□□ 0.46
CNKSR1-202ENST00000374253 PCDHA1Q9Y5I3 950 aa17.92■□□□□ 0.46
CNKSR1-202ENST00000374253 MYMKA6NI61 221 aa17.92■□□□□ 0.46
CNKSR1-202ENST00000374253 STIM1Q13586 685 aa17.92■□□□□ 0.46
CNKSR1-202ENST00000374253 RRP1BQ14684 758 aaKnown RBP17.92■□□□□ 0.46
CNKSR1-202ENST00000374253 ANKRD40Q6AI12 368 aa17.92■□□□□ 0.46
CNKSR1-202ENST00000374253 CSGALNACT2Q8N6G5 542 aa17.92■□□□□ 0.46
CNKSR1-202ENST00000374253 ACRBPQ8NEB7 543 aa17.92■□□□□ 0.46
CNKSR1-202ENST00000374253 CLRN2A0PK11 232 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 LRRC10BA6NIK2 292 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 H7C1D1 291 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 PPIP5K2O43314 1243 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 ABL1P00519 1130 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 IDEP14735 1019 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 CDC37Q16543 378 aaPredicted RBP17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 TTI2Q6NXR4 508 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 FCHSD1Q86WN1 690 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 KIAA0895Q8NCT3 520 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 DUSP9Q99956 384 aaKnown RBP17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 EHD4Q9H223 541 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 L2HGDHQ9H9P8 463 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 SIPA1L1O43166 1804 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 B4DLN1 442 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 hCG_1984214I3L0E3 225 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 RXRBP28702 533 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 KLK7P49862 253 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 SPAG1Q07617 926 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 TMEM266Q2M3C6 531 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 STYK1Q6J9G0 422 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 ZNF713Q8N859 430 aaPredicted RBP17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 GLIS3Q8NEA6 775 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 HAS1Q92839 578 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 ERO1AQ96HE7 468 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 CCDC17Q96LX7 622 aa17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.91■□□□□ 0.46
CNKSR1-202ENST00000374253 MYH7BA7E2Y1 1941 aa17.9■□□□□ 0.46
CNKSR1-202ENST00000374253 TCP10L2B9ZVM9 353 aa17.9■□□□□ 0.46
CNKSR1-202ENST00000374253 GH2P01242 217 aa17.9■□□□□ 0.46
CNKSR1-202ENST00000374253 CLK2P49760 499 aaKnown RBP17.9■□□□□ 0.46
CNKSR1-202ENST00000374253 MRPL12P52815 198 aaKnown RBP17.9■□□□□ 0.46
CNKSR1-202ENST00000374253 ERVK-24P63145 666 aa17.9■□□□□ 0.46
CNKSR1-202ENST00000374253 CBX1P83916 185 aa17.9■□□□□ 0.46
CNKSR1-202ENST00000374253 CCDC93Q567U6 631 aa17.9■□□□□ 0.46
CNKSR1-202ENST00000374253 SV2BQ7L1I2 683 aa17.9■□□□□ 0.46
CNKSR1-202ENST00000374253 C7orf25Q9BPX7 421 aa17.9■□□□□ 0.46
CNKSR1-202ENST00000374253 DHX36Q9H2U1 1008 aaKnown RBP17.9■□□□□ 0.46
CNKSR1-202ENST00000374253 MYO3BQ8WXR4 1341 aa17.9■□□□□ 0.46
CNKSR1-202ENST00000374253 PHLPP2Q6ZVD8 1323 aa17.9■□□□□ 0.46
CNKSR1-202ENST00000374253 RAD17O75943 681 aa17.9■□□□□ 0.46
CNKSR1-202ENST00000374253 SSBP05455 408 aaKnown RBP eCLIP17.9■□□□□ 0.46
CNKSR1-202ENST00000374253 KRT9P35527 623 aa17.9■□□□□ 0.46
CNKSR1-202ENST00000374253 ABCB5Q2M3G0 1257 aa17.9■□□□□ 0.46
CNKSR1-202ENST00000374253 SAMD1Q6SPF0 538 aaPredicted RBP17.9■□□□□ 0.46
CNKSR1-202ENST00000374253 LARP4BQ92615 738 aaKnown RBP17.9■□□□□ 0.46
CNKSR1-202ENST00000374253 IDI2Q9BXS1 227 aa17.9■□□□□ 0.46
CNKSR1-202ENST00000374253 KANSL2Q9H9L4 492 aa17.9■□□□□ 0.46
CNKSR1-202ENST00000374253 ABHD10Q9NUJ1 306 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms