RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 CHPF2Q9P2E5 772 aa10.57□□□□□ -0.72
SF3A3-201ENST00000373019 DCDC2CA8MYV0 355 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 CYP27B1O15528 508 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 ORC4O43929 436 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 ANXA1P04083 346 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 COPB1P53618 953 aaKnown RBP10.56□□□□□ -0.72
SF3A3-201ENST00000373019 C8orf74Q6P047 294 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 ARFGAP2Q8N6H7 521 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 OR2W6PQ8NHA6 318 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 NAF1Q96HR8 494 aaKnown RBP10.56□□□□□ -0.72
SF3A3-201ENST00000373019 DSCC1Q9BVC3 393 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 UBE2OQ9C0C9 1292 aaKnown RBP10.56□□□□□ -0.72
SF3A3-201ENST00000373019 RGPD8O14715 1765 aaPredicted RBP10.56□□□□□ -0.72
SF3A3-201ENST00000373019 PXDNQ92626 1479 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 KLF18A0A0U1RQI7 1052 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 ZNF263O14978 683 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 NPTXRO95502 500 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 HSPD1P10809 573 aaKnown RBP10.56□□□□□ -0.72
SF3A3-201ENST00000373019 ABCD1P33897 745 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 KRT83P78385 493 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 ZBED6P86452 979 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 MEA1Q16626 185 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 EPHA10Q5JZY3 1008 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 CNBD1Q8NA66 436 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 PSMB7Q99436 277 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 SLX1AQ9BQ83 275 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 EPB41L5Q9HCM4 733 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 EVI5O60447 810 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 LUC7L3O95232 432 aaKnown RBP10.56□□□□□ -0.72
SF3A3-201ENST00000373019 TOB1P50616 345 aaPredicted RBP10.56□□□□□ -0.72
SF3A3-201ENST00000373019 ALDH5A1P51649 535 aaPredicted RBP10.56□□□□□ -0.72
SF3A3-201ENST00000373019 ADAM9Q13443 819 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 IFT81Q8WYA0 676 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 TAB2Q9NYJ8 693 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 ANKIB1Q9P2G1 1089 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 ECM29Q5VYK3 1845 aa10.56□□□□□ -0.72
SF3A3-201ENST00000373019 A0A087X0B3 334 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 GOLGA8BA8MQT2 603 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 FMNL1O95466 1100 aaPredicted RBP10.55□□□□□ -0.72
SF3A3-201ENST00000373019 PTPREP23469 700 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 RXRBP28702 533 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 CYP27A1Q02318 531 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 DDX46Q7L014 1031 aaKnown RBP10.55□□□□□ -0.72
SF3A3-201ENST00000373019 CPLX4Q7Z7G2 160 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 IFT20Q8IY31 132 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 SUCLG2Q96I99 432 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 CFAP73A6NFT4 308 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 RASSF10A6NK89 507 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 MYL1P05976 194 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 HSPA9P38646 679 aaKnown RBP10.55□□□□□ -0.72
SF3A3-201ENST00000373019 MAGEA10P43363 369 aaPredicted RBP10.55□□□□□ -0.72
SF3A3-201ENST00000373019 GUCY2DQ02846 1103 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 TTF1Q15361 905 aaPredicted RBP10.55□□□□□ -0.72
SF3A3-201ENST00000373019 UAP1Q16222 522 aaPredicted RBP10.55□□□□□ -0.72
SF3A3-201ENST00000373019 CWF19L2Q2TBE0 894 aaKnown RBP10.55□□□□□ -0.72
SF3A3-201ENST00000373019 TEX9Q8N6V9 391 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 CASKIN2Q8WXE0 1202 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 OCEL1Q9H607 264 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 PLCB1Q9NQ66 1216 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 C9orf78Q9NZ63 289 aaPredicted RBP10.55□□□□□ -0.72
SF3A3-201ENST00000373019 NWD2Q9ULI1 1742 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 NQO1P15559 274 aaKnown RBP10.55□□□□□ -0.72
SF3A3-201ENST00000373019 CNGA1P29973 690 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 GNAQP50148 359 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 PPP2R2AP63151 447 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 TCP11X2Q5H9J9 407 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 MYLK4Q86YV6 388 aaPredicted RBP10.55□□□□□ -0.72
SF3A3-201ENST00000373019 ZNF317Q96PQ6 595 aaPredicted RBP10.55□□□□□ -0.72
SF3A3-201ENST00000373019 ALG1Q9BT22 464 aa10.55□□□□□ -0.72
SF3A3-201ENST00000373019 THRAP3Q9Y2W1 955 aaKnown RBP10.55□□□□□ -0.72
SF3A3-201ENST00000373019 UBE2Q2LH0YL09 131 aa10.54□□□□□ -0.72
SF3A3-201ENST00000373019 HEXIM1O94992 359 aaKnown RBP10.54□□□□□ -0.72
SF3A3-201ENST00000373019 TPP2P29144 1249 aaPredicted RBP10.54□□□□□ -0.72
SF3A3-201ENST00000373019 ZNF844Q08AG5 666 aa10.54□□□□□ -0.72
SF3A3-201ENST00000373019 CUL3Q13618 768 aa10.54□□□□□ -0.72
SF3A3-201ENST00000373019 ILDR2Q71H61 639 aa10.54□□□□□ -0.72
SF3A3-201ENST00000373019 LRRC4CQ9HCJ2 640 aa10.54□□□□□ -0.72
SF3A3-201ENST00000373019 CAPN11Q9UMQ6 739 aa10.54□□□□□ -0.72
SF3A3-201ENST00000373019 CPLX1O14810 134 aa10.54□□□□□ -0.72
SF3A3-201ENST00000373019 ANTXR2P58335 489 aa10.54□□□□□ -0.72
SF3A3-201ENST00000373019 AMOTQ4VCS5 1084 aa10.54□□□□□ -0.72
SF3A3-201ENST00000373019 LRRC23Q53EV4 343 aaPredicted RBP10.54□□□□□ -0.72
SF3A3-201ENST00000373019 PIGWQ7Z7B1 504 aa10.54□□□□□ -0.72
SF3A3-201ENST00000373019 RBM17Q96I25 401 aaKnown RBP10.54□□□□□ -0.72
SF3A3-201ENST00000373019 MS4A14Q96JA4 679 aa10.54□□□□□ -0.72
SF3A3-201ENST00000373019 NHEJ1Q9H9Q4 299 aaPredicted RBP10.54□□□□□ -0.72
SF3A3-201ENST00000373019 ADAM22Q9P0K1 906 aa10.54□□□□□ -0.72
SF3A3-201ENST00000373019 CEP131Q9UPN4 1083 aa10.54□□□□□ -0.72
SF3A3-201ENST00000373019 LUC7L2Q9Y383 392 aaKnown RBP10.54□□□□□ -0.72
SF3A3-201ENST00000373019 GCOM1H8Y6P7 765 aaPredicted RBP10.54□□□□□ -0.72
SF3A3-201ENST00000373019 MYZAPP0CAP1 466 aa10.54□□□□□ -0.72
SF3A3-201ENST00000373019 RARAP10276 462 aa10.54□□□□□ -0.72
SF3A3-201ENST00000373019 ATP2A2P16615 1042 aaKnown RBP10.54□□□□□ -0.72
SF3A3-201ENST00000373019 ECHS1P30084 290 aa10.54□□□□□ -0.72
SF3A3-201ENST00000373019 ALDH3A1P30838 453 aa10.54□□□□□ -0.72
SF3A3-201ENST00000373019 HSD17B3P37058 310 aa10.54□□□□□ -0.72
SF3A3-201ENST00000373019 UBXN1Q04323 297 aa10.54□□□□□ -0.72
SF3A3-201ENST00000373019 MYBPC3Q14896 1274 aa10.54□□□□□ -0.72
SF3A3-201ENST00000373019 FAM133BQ5BKY9 247 aaKnown RBP10.54□□□□□ -0.72
SF3A3-201ENST00000373019 POTEAQ6S8J7 498 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms