RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 RAB34Q9BZG1 259 aa28.19■■■□□ 2.1
CTSA-203ENST00000372459 VCPKMTQ9H867 229 aa28.19■■■□□ 2.1
CTSA-203ENST00000372459 MAGEF1Q9HAY2 307 aa28.19■■■□□ 2.1
CTSA-203ENST00000372459 FANCLQ9NW38 375 aa28.19■■■□□ 2.1
CTSA-203ENST00000372459 RMND1Q9NWS8 449 aa28.19■■■□□ 2.1
CTSA-203ENST00000372459 R3HCC1Q9Y3T6 440 aaKnown RBP28.19■■■□□ 2.1
CTSA-203ENST00000372459 GJA3Q9Y6H8 435 aa28.19■■■□□ 2.1
CTSA-203ENST00000372459 EGFRP00533 1210 aa28.19■■■□□ 2.1
CTSA-203ENST00000372459 FMR1Q06787 632 aaKnown RBP eCLIP28.19■■■□□ 2.1
CTSA-203ENST00000372459 DDX25Q9UHL0 483 aaKnown RBP28.19■■■□□ 2.1
CTSA-203ENST00000372459 ATP1A3P13637 1013 aa28.18■■■□□ 2.1
CTSA-203ENST00000372459 TRAF1Q13077 416 aa28.18■■■□□ 2.1
CTSA-203ENST00000372459 KIAA1755Q5JYT7 1200 aa28.18■■■□□ 2.1
CTSA-203ENST00000372459 FAM83BQ5T0W9 1011 aa28.18■■■□□ 2.1
CTSA-203ENST00000372459 CNOT7Q9UIV1 285 aaKnown RBP28.18■■■□□ 2.1
CTSA-203ENST00000372459 PRELPP51888 382 aa28.17■■■□□ 2.1
CTSA-203ENST00000372459 CCDC144BQ3MJ40 725 aa28.17■■■□□ 2.1
CTSA-203ENST00000372459 USH1GQ495M9 461 aa28.17■■■□□ 2.1
CTSA-203ENST00000372459 UPF1Q92900 1129 aaKnown RBP eCLIP28.17■■■□□ 2.13e-10■■■■■ 31.9
CTSA-203ENST00000372459 ANO3Q9BYT9 981 aa28.17■■■□□ 2.1
CTSA-203ENST00000372459 MYH7BA7E2Y1 1941 aa28.17■■■□□ 2.1
CTSA-203ENST00000372459 MEIS2O14770 477 aa28.17■■■□□ 2.1
CTSA-203ENST00000372459 CBFA2T2O43439 604 aa28.17■■■□□ 2.1
CTSA-203ENST00000372459 NLGN2Q8NFZ4 835 aa28.17■■■□□ 2.1
CTSA-203ENST00000372459 NFE2L3Q9Y4A8 694 aa28.17■■■□□ 2.1
CTSA-203ENST00000372459 SERPINC1P01008 464 aa28.16■■■□□ 2.1
CTSA-203ENST00000372459 RPN1P04843 607 aaKnown RBP28.16■■■□□ 2.1
CTSA-203ENST00000372459 PLCG1P19174 1290 aa28.16■■■□□ 2.1
CTSA-203ENST00000372459 USP11P51784 963 aa28.16■■■□□ 2.1
CTSA-203ENST00000372459 PDIA5Q14554 519 aa28.16■■■□□ 2.1
CTSA-203ENST00000372459 CHURC1Q8WUH1 139 aa28.16■■■□□ 2.1
CTSA-203ENST00000372459 CALML4Q96GE6 196 aa28.16■■■□□ 2.1
CTSA-203ENST00000372459 TEPSINQ96N21 525 aa28.16■■■□□ 2.1
CTSA-203ENST00000372459 KBTBD4Q9NVX7 518 aa28.16■■■□□ 2.1
CTSA-203ENST00000372459 LRWD1Q9UFC0 647 aa28.16■■■□□ 2.1
CTSA-203ENST00000372459 SAMD7Q7Z3H4 446 aa28.15■■■□□ 2.1
CTSA-203ENST00000372459 PLIN2Q99541 437 aa28.15■■■□□ 2.1
CTSA-203ENST00000372459 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.15■■■□□ 2.1
CTSA-203ENST00000372459 IMPACTQ9P2X3 320 aa28.15■■■□□ 2.1
CTSA-203ENST00000372459 SCAF8Q9UPN6 1271 aaKnown RBP28.15■■■□□ 2.1
CTSA-203ENST00000372459 UBASH3AP57075 661 aa28.15■■■□□ 2.1
CTSA-203ENST00000372459 TRMT44Q8IYL2 757 aaKnown RBP28.15■■■□□ 2.1
CTSA-203ENST00000372459 PHF20L1A8MW92 1017 aa28.14■■■□□ 2.1
CTSA-203ENST00000372459 PLA2G6O60733 806 aa28.14■■■□□ 2.1
CTSA-203ENST00000372459 HSP90AA2PQ14568 343 aaPredicted RBP28.14■■■□□ 2.1
CTSA-203ENST00000372459 TBC1D10BQ4KMP7 808 aaPredicted RBP28.14■■■□□ 2.1
CTSA-203ENST00000372459 MMTAG2Q9BU76 263 aaKnown RBP28.14■■■□□ 2.1
CTSA-203ENST00000372459 FOSP01100 380 aaPredicted RBP28.13■■■□□ 2.09
CTSA-203ENST00000372459 CD44P16070 742 aaKnown RBP28.13■■■□□ 2.09
CTSA-203ENST00000372459 ZYXQ15942 572 aaKnown RBP28.13■■■□□ 2.09
CTSA-203ENST00000372459 ZNF658Q5TYW1 1059 aaPredicted RBP28.13■■■□□ 2.09
CTSA-203ENST00000372459 FILIP1Q7Z7B0 1213 aa28.13■■■□□ 2.09
CTSA-203ENST00000372459 FAM160B2Q86V87 743 aa28.13■■■□□ 2.09
CTSA-203ENST00000372459 HACL1Q9UJ83 578 aa28.13■■■□□ 2.09
CTSA-203ENST00000372459 PPP1R3GB7ZBB8 358 aa28.13■■■□□ 2.09
CTSA-203ENST00000372459 SEMA3FQ13275 785 aa28.13■■■□□ 2.09
CTSA-203ENST00000372459 KIF4BQ2VIQ3 1234 aa28.13■■■□□ 2.09
CTSA-203ENST00000372459 MOXD1Q6UVY6 613 aa28.13■■■□□ 2.09
CTSA-203ENST00000372459 SYNRGQ9UMZ2 1314 aa28.12■■■□□ 2.09
CTSA-203ENST00000372459 MARCH6O60337 910 aa28.12■■■□□ 2.09
CTSA-203ENST00000372459 ZNF18P17022 549 aa28.12■■■□□ 2.09
CTSA-203ENST00000372459 GSDMDP57764 484 aa28.12■■■□□ 2.09
CTSA-203ENST00000372459 KLHL10Q6JEL2 608 aa28.12■■■□□ 2.09
CTSA-203ENST00000372459 TEX2Q8IWB9 1127 aa28.12■■■□□ 2.09
CTSA-203ENST00000372459 SMYD4Q8IYR2 804 aaPredicted RBP28.12■■■□□ 2.09
CTSA-203ENST00000372459 MED15Q96RN5 788 aa28.12■■■□□ 2.09
CTSA-203ENST00000372459 GINM1Q9NU53 330 aa28.12■■■□□ 2.09
CTSA-203ENST00000372459 ATAD5Q96QE3 1844 aa28.12■■■□□ 2.09
CTSA-203ENST00000372459 SPDYE3A6NKU9 549 aa28.11■■■□□ 2.09
CTSA-203ENST00000372459 KCNB1Q14721 858 aa28.11■■■□□ 2.09
CTSA-203ENST00000372459 SPATA1Q5VX52 437 aa28.11■■■□□ 2.09
CTSA-203ENST00000372459 KIAA1524Q8TCG1 905 aa28.11■■■□□ 2.09
CTSA-203ENST00000372459 RANBP17Q9H2T7 1088 aaKnown RBP28.11■■■□□ 2.09
CTSA-203ENST00000372459 FEM1BQ9UK73 627 aa28.11■■■□□ 2.09
CTSA-203ENST00000372459 PYCARDQ9ULZ3 195 aa28.11■■■□□ 2.09
CTSA-203ENST00000372459 ZNF541Q9H0D2 1346 aa28.11■■■□□ 2.09
CTSA-203ENST00000372459 CYP3A7-CYP3A51PA0A087WV96 503 aa28.11■■■□□ 2.09
CTSA-203ENST00000372459 CDK11BP21127 795 aaKnown RBP28.11■■■□□ 2.09
CTSA-203ENST00000372459 CYP3A7P24462 503 aa28.11■■■□□ 2.09
CTSA-203ENST00000372459 LRRC8AQ8IWT6 810 aa28.11■■■□□ 2.09
CTSA-203ENST00000372459 LRRC15Q8TF66 581 aa28.11■■■□□ 2.09
CTSA-203ENST00000372459 CACTINQ8WUQ7 758 aaKnown RBP28.11■■■□□ 2.09
CTSA-203ENST00000372459 HAS1Q92839 578 aa28.11■■■□□ 2.09
CTSA-203ENST00000372459 KIFC2Q96AC6 838 aa28.11■■■□□ 2.09
CTSA-203ENST00000372459 FEZ1Q99689 392 aa28.11■■■□□ 2.09
CTSA-203ENST00000372459 GLIS2Q9BZE0 524 aaPredicted RBP28.11■■■□□ 2.09
CTSA-203ENST00000372459 AMPD3Q01432 767 aa28.1■■■□□ 2.09
CTSA-203ENST00000372459 LRMPQ12912 555 aa28.1■■■□□ 2.09
CTSA-203ENST00000372459 KRT79Q5XKE5 535 aa28.1■■■□□ 2.09
CTSA-203ENST00000372459 DEFB129Q9H1M3 183 aa28.1■■■□□ 2.09
CTSA-203ENST00000372459 H7C1D1 291 aa28.1■■■□□ 2.09
CTSA-203ENST00000372459 ARHGAP4P98171 946 aa28.1■■■□□ 2.09
CTSA-203ENST00000372459 NOLC1Q14978 699 aaKnown RBP eCLIP28.1■■■□□ 2.099e-12■■□□□ 12.5
CTSA-203ENST00000372459 TMC6Q7Z403 805 aa28.1■■■□□ 2.09
CTSA-203ENST00000372459 CDK5RAP3Q96JB5 506 aa28.1■■■□□ 2.09
CTSA-203ENST00000372459 MBOAT7Q96N66 472 aa28.1■■■□□ 2.09
CTSA-203ENST00000372459 ZNF341Q9BYN7 854 aa28.1■■■□□ 2.09
CTSA-203ENST00000372459 STK17AQ9UEE5 414 aa28.1■■■□□ 2.09
CTSA-203ENST00000372459 ASTN2O75129 1339 aaPredicted RBP28.09■■■□□ 2.09
CTSA-203ENST00000372459 POTEMA6NI47 508 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms