RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 OFD1O75665 1012 aa11.97□□□□□ -0.49
COL5A1-202ENST00000371820 ICAM1P05362 532 aa11.97□□□□□ -0.49
COL5A1-202ENST00000371820 ZSCAN22P10073 491 aaPredicted RBP11.97□□□□□ -0.49
COL5A1-202ENST00000371820 PDHBP11177 359 aa11.97□□□□□ -0.49
COL5A1-202ENST00000371820 ALAS1P13196 640 aa11.97□□□□□ -0.49
COL5A1-202ENST00000371820 TRIM60Q495X7 471 aa11.97□□□□□ -0.49
COL5A1-202ENST00000371820 CCDC183Q5T5S1 534 aa11.97□□□□□ -0.49
COL5A1-202ENST00000371820 C1orf53Q5VUE5 145 aa11.97□□□□□ -0.49
COL5A1-202ENST00000371820 CCDC174Q6PII3 467 aa11.97□□□□□ -0.49
COL5A1-202ENST00000371820 MAMDC4Q6UXC1 1216 aa11.97□□□□□ -0.49
COL5A1-202ENST00000371820 TRERF1Q96PN7 1200 aa11.97□□□□□ -0.49
COL5A1-202ENST00000371820 MAP7D2Q96T17 732 aa11.97□□□□□ -0.49
COL5A1-202ENST00000371820 LSG1Q9H089 658 aaKnown RBP11.97□□□□□ -0.49
COL5A1-202ENST00000371820 RANBP17Q9H2T7 1088 aaKnown RBP11.97□□□□□ -0.49
COL5A1-202ENST00000371820 ZSWIM6Q9HCJ5 1215 aa11.97□□□□□ -0.49
COL5A1-202ENST00000371820 HOMER2Q9NSB8 354 aa11.97□□□□□ -0.49
COL5A1-202ENST00000371820 SNX14Q9Y5W7 946 aa11.97□□□□□ -0.49
COL5A1-202ENST00000371820 ZNF536O15090 1300 aa11.96□□□□□ -0.49
COL5A1-202ENST00000371820 FRMPD2Q68DX3 1309 aaPredicted RBP11.96□□□□□ -0.49
COL5A1-202ENST00000371820 POTEB2H3BUK9 544 aa11.96□□□□□ -0.49
COL5A1-202ENST00000371820 STX6O43752 255 aa11.96□□□□□ -0.49
COL5A1-202ENST00000371820 SNHG28P0DPA3 235 aa11.96□□□□□ -0.49
COL5A1-202ENST00000371820 ADCYAP1R1P41586 468 aa11.96□□□□□ -0.49
COL5A1-202ENST00000371820 ZNF543Q08ER8 600 aa11.96□□□□□ -0.49
COL5A1-202ENST00000371820 FAM109BQ6ICB4 259 aaPredicted RBP11.96□□□□□ -0.49
COL5A1-202ENST00000371820 MTERF4Q7Z6M4 381 aaKnown RBP11.96□□□□□ -0.49
COL5A1-202ENST00000371820 RALYLQ86SE5 291 aaKnown RBP11.96□□□□□ -0.49
COL5A1-202ENST00000371820 RNF180Q86T96 592 aa11.96□□□□□ -0.49
COL5A1-202ENST00000371820 PNMA1Q8ND90 353 aa11.96□□□□□ -0.49
COL5A1-202ENST00000371820 GPT2Q8TD30 523 aa11.96□□□□□ -0.49
COL5A1-202ENST00000371820 ANKS1AQ92625 1134 aa11.96□□□□□ -0.49
COL5A1-202ENST00000371820 AGBL1Q96MI9 1066 aa11.96□□□□□ -0.49
COL5A1-202ENST00000371820 ZSCAN10Q96SZ4 725 aaPredicted RBP11.96□□□□□ -0.49
COL5A1-202ENST00000371820 ZKSCAN3Q9BRR0 538 aa11.96□□□□□ -0.49
COL5A1-202ENST00000371820 ABHD16BQ9H3Z7 469 aa11.96□□□□□ -0.49
COL5A1-202ENST00000371820 GPCPD1Q9NPB8 672 aa11.96□□□□□ -0.49
COL5A1-202ENST00000371820 PDLIM7Q9NR12 457 aa11.96□□□□□ -0.49
COL5A1-202ENST00000371820 PDRG1Q9NUG6 133 aa11.96□□□□□ -0.49
COL5A1-202ENST00000371820 FAM184BQ9ULE4 1060 aa11.96□□□□□ -0.49
COL5A1-202ENST00000371820 PHF24Q9UPV7 400 aa11.96□□□□□ -0.49
COL5A1-202ENST00000371820 TNKSO95271 1327 aa11.95□□□□□ -0.5
COL5A1-202ENST00000371820 WDR19Q8NEZ3 1342 aa11.95□□□□□ -0.5
COL5A1-202ENST00000371820 ERICH2A1L162 156 aa11.95□□□□□ -0.5
COL5A1-202ENST00000371820 ASB14A6NK59 587 aa11.95□□□□□ -0.5
COL5A1-202ENST00000371820 DLL1O00548 723 aa11.95□□□□□ -0.5
COL5A1-202ENST00000371820 MYCNP04198 464 aaPredicted RBP11.95□□□□□ -0.5
COL5A1-202ENST00000371820 ZNF865P0CJ78 1059 aaPredicted RBP11.95□□□□□ -0.5
COL5A1-202ENST00000371820 TSGA10IPQ3SY00 556 aa11.95□□□□□ -0.5
COL5A1-202ENST00000371820 ASPRV1Q53RT3 343 aa11.95□□□□□ -0.5
COL5A1-202ENST00000371820 FERMT2Q96AC1 680 aa11.95□□□□□ -0.5
COL5A1-202ENST00000371820 MPHOSPH6Q99547 160 aaKnown RBP11.95□□□□□ -0.5
COL5A1-202ENST00000371820 RBSNQ9H1K0 784 aa11.95□□□□□ -0.5
COL5A1-202ENST00000371820 SPC25Q9HBM1 224 aa11.95□□□□□ -0.5
COL5A1-202ENST00000371820 A1CFQ9NQ94 594 aaKnown RBP11.95□□□□□ -0.5
COL5A1-202ENST00000371820 XPNPEP3Q9NQH7 507 aa11.95□□□□□ -0.5
COL5A1-202ENST00000371820 PRDM5Q9NQX1 630 aaPredicted RBP11.95□□□□□ -0.5
COL5A1-202ENST00000371820 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.95□□□□□ -0.5
COL5A1-202ENST00000371820 ZSWIM5Q9P217 1185 aa11.95□□□□□ -0.5
COL5A1-202ENST00000371820 ADD3Q9UEY8 706 aaKnown RBP11.95□□□□□ -0.5
COL5A1-202ENST00000371820 ZHX1Q9UKY1 873 aaPredicted RBP11.95□□□□□ -0.5
COL5A1-202ENST00000371820 SMCHD1A6NHR9 2005 aa11.94□□□□□ -0.5
COL5A1-202ENST00000371820 LOC102724159A0A0B4J2E5 919 aa11.94□□□□□ -0.5
COL5A1-202ENST00000371820 TAL1P17542 331 aaPredicted RBP11.94□□□□□ -0.5
COL5A1-202ENST00000371820 SLC16A2P36021 539 aa11.94□□□□□ -0.5
COL5A1-202ENST00000371820 SART3Q15020 963 aaKnown RBP11.94□□□□□ -0.5
COL5A1-202ENST00000371820 PWP2Q15269 919 aaKnown RBP11.94□□□□□ -0.5
COL5A1-202ENST00000371820 IFIT1BQ5T764 474 aaKnown RBP11.94□□□□□ -0.5
COL5A1-202ENST00000371820 TTBK2Q6IQ55 1244 aa11.94□□□□□ -0.5
COL5A1-202ENST00000371820 RUFY3Q7L099 469 aa11.94□□□□□ -0.5
COL5A1-202ENST00000371820 ARMCX2Q7L311 632 aa11.94□□□□□ -0.5
COL5A1-202ENST00000371820 RASGRP2Q7LDG7 609 aa11.94□□□□□ -0.5
COL5A1-202ENST00000371820 ENAHQ8N8S7 591 aaPredicted RBP11.94□□□□□ -0.5
COL5A1-202ENST00000371820 FAM133AQ8N9E0 248 aa11.94□□□□□ -0.5
COL5A1-202ENST00000371820 GUCD1Q96NT3 240 aa11.94□□□□□ -0.5
COL5A1-202ENST00000371820 MAF1Q9H063 256 aa11.94□□□□□ -0.5
COL5A1-202ENST00000371820 ZKSCAN5Q9Y2L8 839 aa11.94□□□□□ -0.5
COL5A1-202ENST00000371820 KIF3AQ9Y496 699 aa11.94□□□□□ -0.5
COL5A1-202ENST00000371820 CUL9Q8IWT3 2517 aa11.94□□□□□ -0.5
COL5A1-202ENST00000371820 A0A1W2PQ45 241 aaPredicted RBP11.93□□□□□ -0.5
COL5A1-202ENST00000371820 A0A1W2PQY0 241 aa11.93□□□□□ -0.5
COL5A1-202ENST00000371820 TRIM43BA6NCK2 446 aa11.93□□□□□ -0.5
COL5A1-202ENST00000371820 B4DLN1 442 aa11.93□□□□□ -0.5
COL5A1-202ENST00000371820 ADAMTS4O75173 837 aa11.93□□□□□ -0.5
COL5A1-202ENST00000371820 DUSP11O75319 330 aaKnown RBP11.93□□□□□ -0.5
COL5A1-202ENST00000371820 CAVIN2O95810 425 aa11.93□□□□□ -0.5
COL5A1-202ENST00000371820 SNAI1O95863 264 aaPredicted RBP11.93□□□□□ -0.5
COL5A1-202ENST00000371820 PGK1P00558 417 aa11.93□□□□□ -0.5
COL5A1-202ENST00000371820 PARP1P09874 1014 aaKnown RBP11.93□□□□□ -0.5
COL5A1-202ENST00000371820 MRPL12P52815 198 aaKnown RBP11.93□□□□□ -0.5
COL5A1-202ENST00000371820 ACVR2BQ13705 512 aa11.93□□□□□ -0.5
COL5A1-202ENST00000371820 NECTIN1Q15223 517 aa11.93□□□□□ -0.5
COL5A1-202ENST00000371820 SHHQ15465 462 aa11.93□□□□□ -0.5
COL5A1-202ENST00000371820 C9orf50Q5SZB4 431 aa11.93□□□□□ -0.5
COL5A1-202ENST00000371820 NSMFQ6X4W1 530 aa11.93□□□□□ -0.5
COL5A1-202ENST00000371820 SH3RF1Q7Z6J0 888 aa11.93□□□□□ -0.5
COL5A1-202ENST00000371820 NCOA7Q8NI08 942 aa11.93□□□□□ -0.5
COL5A1-202ENST00000371820 MAP4K1Q92918 833 aa11.93□□□□□ -0.5
COL5A1-202ENST00000371820 BADQ92934 168 aa11.93□□□□□ -0.5
COL5A1-202ENST00000371820 TRIM43Q96BQ3 446 aaPredicted RBP11.93□□□□□ -0.5
COL5A1-202ENST00000371820 LENG1Q96BZ8 264 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 660.5 ms