RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 ZNF483Q8TF39 744 aaPredicted RBP12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 TUBGCP2Q9BSJ2 902 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 EPB41L5Q9HCM4 733 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 PLAGL2Q9UPG8 496 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 PPIP5K2O43314 1243 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 SPAG1Q07617 926 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 CDC37Q16543 378 aaPredicted RBP12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 ANKRD40Q6AI12 368 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 PROCA1Q8NCQ7 364 aaPredicted RBP12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 RASSF8Q8NHQ8 419 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 PPANQ9NQ55 473 aaKnown RBP12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.97□□□□□ -0.332e-7■□□□□ 8.8
SMARCA1-201ENST00000371121 TMEM59LQ9UK28 342 aa12.97□□□□□ -0.33
SMARCA1-201ENST00000371121 EEF1GP26641 437 aaKnown RBP12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 CDCA2Q69YH5 1023 aaPredicted RBP12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 TTLL11Q8NHH1 800 aa12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 GIMAP7Q8NHV1 300 aa12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 RNF217Q8TC41 542 aa12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 WASF1Q92558 559 aa12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 ZNF512BQ96KM6 892 aaPredicted RBP12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 THAP9Q9H5L6 903 aa12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 NUTM2BA6NNL0 878 aaPredicted RBP12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 NUTM2EB1AL46 878 aaPredicted RBP12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 PATL2C9JE40 543 aaKnown RBP12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 ELF3P78545 371 aaPredicted RBP12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 GUCY2DQ02846 1103 aa12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 ZNF844Q08AG5 666 aa12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 ADGRA1Q86SQ6 560 aa12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 GIMAP8Q8ND71 665 aaPredicted RBP12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 EHBP1Q8NDI1 1231 aa12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 TRIM58Q8NG06 486 aa12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 BAP1Q92560 729 aa12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 ARMT1Q9H993 441 aa12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 ATP6V0A4Q9HBG4 840 aa12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 PLAAQ9Y263 795 aa12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 CCDC88AQ3V6T2 1871 aa12.96□□□□□ -0.33
SMARCA1-201ENST00000371121 SRRM3A6NNA2 597 aaPredicted RBP12.96□□□□□ -0.34
SMARCA1-201ENST00000371121 SNAP23O00161 211 aa12.96□□□□□ -0.34
SMARCA1-201ENST00000371121 HEXIM1O94992 359 aaKnown RBP12.96□□□□□ -0.34
SMARCA1-201ENST00000371121 CDC25CP30307 473 aa12.96□□□□□ -0.34
SMARCA1-201ENST00000371121 HSPA9P38646 679 aaKnown RBP12.96□□□□□ -0.34
SMARCA1-201ENST00000371121 SNCBQ16143 134 aa12.96□□□□□ -0.34
SMARCA1-201ENST00000371121 LCORLQ8N3X6 602 aa12.96□□□□□ -0.34
SMARCA1-201ENST00000371121 ISCA1Q9BUE6 129 aa12.96□□□□□ -0.34
SMARCA1-201ENST00000371121 EXOC1Q9NV70 894 aa12.96□□□□□ -0.34
SMARCA1-201ENST00000371121 FAM205AQ6ZU69 1335 aa12.96□□□□□ -0.34
SMARCA1-201ENST00000371121 PJA2O43164 708 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 IDH1O75874 414 aaKnown RBP12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 KIAA0754O94854 1291 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 CSB-PGBD3P0DP91 1061 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 KIF11P52732 1056 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 ERVK-9P63128 1117 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 PPP4R3AQ6IN85 833 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 TYW1BQ6NUM6 668 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 MAB21L3Q8N8X9 362 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 SEC16BQ96JE7 1060 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 INPP4AQ96PE3 977 aaPredicted RBP12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 NUP58Q9BVL2 599 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 RNF26Q9BY78 433 aaPredicted RBP12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 EBF2Q9HAK2 575 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 PACSIN2Q9UNF0 486 aaPredicted RBP12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 A0A1B0GUL6 1792 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 A0A1W2PQJ5 194 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 NEBLO76041 1014 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 HSD17B3P37058 310 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 DRP2Q13474 957 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 GLE1Q53GS7 698 aaKnown RBP12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 TTC38Q5R3I4 469 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 C8orf74Q6P047 294 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 OSCARQ8IYS5 282 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 IFIH1Q9BYX4 1025 aaKnown RBP12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 CACNA1SQ13698 1873 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 RAD51CO43502 376 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 PAEPP09466 180 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 ITGA6P23229 1130 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 ARID4AP29374 1257 aaPredicted RBP12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 KRT2P35908 639 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 EIF4A3P38919 411 aaKnown RBP12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 DNM2P50570 870 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 GFPT1Q06210 699 aaPredicted RBP12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 CCDC96Q2M329 555 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 CEP57Q86XR8 500 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 TATDN2Q93075 761 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 HPS3Q969F9 1004 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 STAMBPL1Q96FJ0 436 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 FAM89AQ96GI7 184 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 ZNF570Q96NI8 536 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 ERGIC2Q96RQ1 377 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 CENPHQ9H3R5 247 aa12.95□□□□□ -0.34
SMARCA1-201ENST00000371121 TOGARAM1Q9Y4F4 1720 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 TLR2O60603 784 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 ATP6V1G2O95670 118 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 TATP17735 454 aaPredicted RBP12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 SLC1A4P43007 532 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 KIF5AQ12840 1032 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 WTAPQ15007 396 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 FIGNQ5HY92 759 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 IFT81Q8WYA0 676 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 RAPGEF5Q92565 580 aa12.94□□□□□ -0.34
SMARCA1-201ENST00000371121 HYOU1Q9Y4L1 999 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms