RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 CCNL1Q9UK58 526 aaPredicted RBP7.17□□□□□ -1.26
RNU4-4P-201ENST00000364588 UTRNP46939 3433 aa7.17□□□□□ -1.26
RNU4-4P-201ENST00000364588 COL24A1Q17RW2 1714 aa7.17□□□□□ -1.26
RNU4-4P-201ENST00000364588 RTL1A6NKG5 1358 aa7.17□□□□□ -1.26
RNU4-4P-201ENST00000364588 USP47Q96K76 1375 aa7.17□□□□□ -1.26
RNU4-4P-201ENST00000364588 MAP3K5Q99683 1374 aa7.17□□□□□ -1.26
RNU4-4P-201ENST00000364588 HTR3BO95264 441 aa7.16□□□□□ -1.26
RNU4-4P-201ENST00000364588 FUT4P22083 530 aa7.16□□□□□ -1.26
RNU4-4P-201ENST00000364588 VAMP1P23763 118 aa7.16□□□□□ -1.26
RNU4-4P-201ENST00000364588 TMF1P82094 1093 aa7.16□□□□□ -1.26
RNU4-4P-201ENST00000364588 TRIM26Q12899 539 aaPredicted RBP7.16□□□□□ -1.26
RNU4-4P-201ENST00000364588 NKPD1Q17RQ9 610 aa7.16□□□□□ -1.26
RNU4-4P-201ENST00000364588 HSP90AB2PQ58FF8 381 aa7.16□□□□□ -1.26
RNU4-4P-201ENST00000364588 WFDC3Q8IUB2 231 aa7.16□□□□□ -1.26
RNU4-4P-201ENST00000364588 SLFN12Q8IYM2 578 aa7.16□□□□□ -1.26
RNU4-4P-201ENST00000364588 NLGN2Q8NFZ4 835 aa7.16□□□□□ -1.26
RNU4-4P-201ENST00000364588 RAPGEF4Q8WZA2 1011 aa7.16□□□□□ -1.26
RNU4-4P-201ENST00000364588 REV1Q9UBZ9 1251 aa7.16□□□□□ -1.26
RNU4-4P-201ENST00000364588 CORINQ9Y5Q5 1042 aa7.16□□□□□ -1.26
RNU4-4P-201ENST00000364588 SMG6Q86US8 1419 aaKnown RBP7.16□□□□□ -1.26
RNU4-4P-201ENST00000364588 CD8BP10966 210 aa7.15□□□□□ -1.26
RNU4-4P-201ENST00000364588 FBXL19Q6PCT2 694 aa7.15□□□□□ -1.26
RNU4-4P-201ENST00000364588 CBLL1Q75N03 491 aa7.15□□□□□ -1.26
RNU4-4P-201ENST00000364588 COL23A1Q86Y22 540 aaPredicted RBP7.15□□□□□ -1.26
RNU4-4P-201ENST00000364588 POLR3KQ9Y2Y1 108 aaPredicted RBP7.15□□□□□ -1.26
RNU4-4P-201ENST00000364588 CAPN6Q9Y6Q1 641 aa7.15□□□□□ -1.26
RNU4-4P-201ENST00000364588 PITPNM2Q9BZ72 1349 aa7.15□□□□□ -1.26
RNU4-4P-201ENST00000364588 C5P01031 1676 aa7.15□□□□□ -1.27
RNU4-4P-201ENST00000364588 TOGARAM1Q9Y4F4 1720 aa7.15□□□□□ -1.27
RNU4-4P-201ENST00000364588 ITGB4P16144 1822 aa7.15□□□□□ -1.27
RNU4-4P-201ENST00000364588 TAF1LQ8IZX4 1826 aa7.15□□□□□ -1.27
RNU4-4P-201ENST00000364588 PPM1GO15355 546 aaPredicted RBP7.14□□□□□ -1.27
RNU4-4P-201ENST00000364588 GRIN3BO60391 1043 aa7.14□□□□□ -1.27
RNU4-4P-201ENST00000364588 INSRP06213 1382 aa7.14□□□□□ -1.27
RNU4-4P-201ENST00000364588 FLT4P35916 1363 aa7.14□□□□□ -1.27
RNU4-4P-201ENST00000364588 CGNL1Q0VF96 1302 aa7.14□□□□□ -1.27
RNU4-4P-201ENST00000364588 BNIP3Q12983 259 aa7.14□□□□□ -1.27
RNU4-4P-201ENST00000364588 IKZF1Q13422 519 aa7.14□□□□□ -1.27
RNU4-4P-201ENST00000364588 SPRED2Q7Z698 418 aa7.14□□□□□ -1.27
RNU4-4P-201ENST00000364588 THAP5Q7Z6K1 395 aa7.14□□□□□ -1.27
RNU4-4P-201ENST00000364588 DNAJB8Q8NHS0 232 aa7.14□□□□□ -1.27
RNU4-4P-201ENST00000364588 PIWIL2Q8TC59 973 aaKnown RBP7.14□□□□□ -1.27
RNU4-4P-201ENST00000364588 ZNF296Q8WUU4 475 aaPredicted RBP7.14□□□□□ -1.27
RNU4-4P-201ENST00000364588 KLHL3Q9UH77 587 aa7.14□□□□□ -1.27
RNU4-4P-201ENST00000364588 GOLGB1Q14789 3259 aaKnown RBP7.13□□□□□ -1.27
RNU4-4P-201ENST00000364588 NSD3Q9BZ95 1437 aa7.13□□□□□ -1.27
RNU4-4P-201ENST00000364588 PALLDQ8WX93 1383 aa7.13□□□□□ -1.27
RNU4-4P-201ENST00000364588 PCDH11XQ9BZA7 1347 aa7.13□□□□□ -1.27
RNU4-4P-201ENST00000364588 PCDH11YQ9BZA8 1340 aa7.13□□□□□ -1.27
RNU4-4P-201ENST00000364588 TLR3O15455 904 aaKnown RBP7.13□□□□□ -1.27
RNU4-4P-201ENST00000364588 CYP27B1O15528 508 aa7.13□□□□□ -1.27
RNU4-4P-201ENST00000364588 GREM1O60565 184 aa7.13□□□□□ -1.27
RNU4-4P-201ENST00000364588 FANCCQ00597 558 aa7.13□□□□□ -1.27
RNU4-4P-201ENST00000364588 APOBRQ0VD83 1088 aa7.13□□□□□ -1.27
RNU4-4P-201ENST00000364588 ZNF792Q3KQV3 632 aa7.13□□□□□ -1.27
RNU4-4P-201ENST00000364588 KIAA0825Q8IV33 1275 aa7.13□□□□□ -1.27
RNU4-4P-201ENST00000364588 FBXO27Q8NI29 283 aa7.13□□□□□ -1.27
RNU4-4P-201ENST00000364588 BACH2Q9BYV9 841 aa7.13□□□□□ -1.27
RNU4-4P-201ENST00000364588 ADAMTS1Q9UHI8 967 aa7.13□□□□□ -1.27
RNU4-4P-201ENST00000364588 MAP2P11137 1827 aaKnown RBP7.13□□□□□ -1.27
RNU4-4P-201ENST00000364588 PKD1L3Q7Z443 1732 aa7.13□□□□□ -1.27
RNU4-4P-201ENST00000364588 PRR33A8MZF0 331 aa7.12□□□□□ -1.27
RNU4-4P-201ENST00000364588 PAX4O43316 350 aa7.12□□□□□ -1.27
RNU4-4P-201ENST00000364588 CBX7O95931 251 aa7.12□□□□□ -1.27
RNU4-4P-201ENST00000364588 RECKO95980 971 aa7.12□□□□□ -1.27
RNU4-4P-201ENST00000364588 YBX3P16989 372 aaKnown RBP eCLIP7.12□□□□□ -1.27
RNU4-4P-201ENST00000364588 TAL1P17542 331 aaPredicted RBP7.12□□□□□ -1.27
RNU4-4P-201ENST00000364588 TNNI2P48788 182 aa7.12□□□□□ -1.27
RNU4-4P-201ENST00000364588 C1QTNF8P60827 252 aa7.12□□□□□ -1.27
RNU4-4P-201ENST00000364588 SMIM5Q71RC9 77 aa7.12□□□□□ -1.27
RNU4-4P-201ENST00000364588 CDH24Q86UP0 819 aa7.12□□□□□ -1.27
RNU4-4P-201ENST00000364588 USP48Q86UV5 1035 aa7.12□□□□□ -1.27
RNU4-4P-201ENST00000364588 RIN3Q8TB24 985 aa7.12□□□□□ -1.27
RNU4-4P-201ENST00000364588 CEP131Q9UPN4 1083 aa7.12□□□□□ -1.27
RNU4-4P-201ENST00000364588 C4BP0C0L5 1744 aa7.12□□□□□ -1.27
RNU4-4P-201ENST00000364588 UBR3Q6ZT12 1888 aa7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 KIF24Q5T7B8 1368 aa7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 ANKRD26Q9UPS8 1709 aa7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 BIN1O00499 593 aa7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 SCAMP3O14828 347 aaKnown RBP7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 JUNBP17275 347 aaPredicted RBP7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 CHMP4BP1P59074 171 aa7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 LDLRAD1Q5T700 205 aa7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 CDKAL1Q5VV42 579 aa7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 SLC23A3Q6PIS1 610 aa7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 AMIGO3Q86WK7 504 aa7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 PHACTR4Q8IZ21 702 aa7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 REXO1Q8N1G1 1221 aaKnown RBP7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 PI4K2BQ8TCG2 481 aa7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 RNF141Q8WVD5 230 aa7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 RNF34Q969K3 372 aa7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 CCDC74BQ96LY2 380 aa7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 POLR3GLQ9BT43 218 aa7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 SPON2Q9BUD6 331 aa7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 NT5C1AQ9BXI3 368 aa7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 ASPNQ9BXN1 380 aa7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 RC3H2Q9HBD1 1191 aaKnown RBP7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 BRMS1Q9HCU9 246 aa7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 GMIPQ9P107 970 aa7.11□□□□□ -1.27
RNU4-4P-201ENST00000364588 PCDHB14Q9Y5E9 798 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms