RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 NLGN2Q8NFZ4 835 aa6.51□□□□□ -1.37
RNU6-553P-201ENST00000364047 COPS5Q92905 334 aa6.51□□□□□ -1.37
RNU6-553P-201ENST00000364047 NKX2-4Q9H2Z4 354 aa6.51□□□□□ -1.37
RNU6-553P-201ENST00000364047 CYP26B1Q9NR63 512 aa6.51□□□□□ -1.37
RNU6-553P-201ENST00000364047 SRGAP3O43295 1099 aa6.5□□□□□ -1.37
RNU6-553P-201ENST00000364047 KLF4O43474 513 aa6.5□□□□□ -1.37
RNU6-553P-201ENST00000364047 CYBBP04839 570 aa6.5□□□□□ -1.37
RNU6-553P-201ENST00000364047 THBDP07204 575 aa6.5□□□□□ -1.37
RNU6-553P-201ENST00000364047 NR1I3Q14994 352 aa6.5□□□□□ -1.37
RNU6-553P-201ENST00000364047 PLEKHN1Q494U1 663 aaPredicted RBP6.5□□□□□ -1.37
RNU6-553P-201ENST00000364047 CNTD2Q9H8S5 307 aa6.5□□□□□ -1.37
RNU6-553P-201ENST00000364047 GULP1Q9UBP9 304 aa6.5□□□□□ -1.37
RNU6-553P-201ENST00000364047 RWDD3Q9Y3V2 267 aa6.5□□□□□ -1.37
RNU6-553P-201ENST00000364047 NPHS1O60500 1241 aa6.49□□□□□ -1.37
RNU6-553P-201ENST00000364047 STK10O94804 968 aaKnown RBP6.49□□□□□ -1.37
RNU6-553P-201ENST00000364047 SNRPB2P08579 225 aaKnown RBP6.49□□□□□ -1.37
RNU6-553P-201ENST00000364047 DBHP09172 617 aa6.49□□□□□ -1.37
RNU6-553P-201ENST00000364047 CFPP27918 469 aa6.49□□□□□ -1.37
RNU6-553P-201ENST00000364047 MAPKAPK2P49137 400 aa6.49□□□□□ -1.37
RNU6-553P-201ENST00000364047 EPHB3P54753 998 aa6.49□□□□□ -1.37
RNU6-553P-201ENST00000364047 CBX2Q14781 532 aaPredicted RBP6.49□□□□□ -1.37
RNU6-553P-201ENST00000364047 SLC10A6Q3KNW5 377 aa6.49□□□□□ -1.37
RNU6-553P-201ENST00000364047 CIAPIN1Q6FI81 312 aa6.49□□□□□ -1.37
RNU6-553P-201ENST00000364047 ZC3H14Q6PJT7 736 aaKnown RBP6.49□□□□□ -1.37
RNU6-553P-201ENST00000364047 PAQR3Q6TCH7 311 aa6.49□□□□□ -1.37
RNU6-553P-201ENST00000364047 CABP7Q86V35 215 aa6.49□□□□□ -1.37
RNU6-553P-201ENST00000364047 LZTR1Q8N653 840 aa6.49□□□□□ -1.37
RNU6-553P-201ENST00000364047 ZSCAN18Q8TBC5 510 aaPredicted RBP6.49□□□□□ -1.37
RNU6-553P-201ENST00000364047 TRIM55Q9BYV6 548 aa6.49□□□□□ -1.37
RNU6-553P-201ENST00000364047 TANGO6Q9C0B7 1094 aa6.49□□□□□ -1.37
RNU6-553P-201ENST00000364047 EPN3Q9H201 632 aa6.49□□□□□ -1.37
RNU6-553P-201ENST00000364047 C7orf72A4D263 438 aa6.48□□□□□ -1.37
RNU6-553P-201ENST00000364047 AGRPO00253 132 aa6.48□□□□□ -1.37
RNU6-553P-201ENST00000364047 NUAK1O60285 661 aa6.48□□□□□ -1.37
RNU6-553P-201ENST00000364047 HOXC12P31275 282 aa6.48□□□□□ -1.37
RNU6-553P-201ENST00000364047 ECI1P42126 302 aa6.48□□□□□ -1.37
RNU6-553P-201ENST00000364047 CDR1P51861 262 aa6.48□□□□□ -1.37
RNU6-553P-201ENST00000364047 RAB33AQ14088 237 aa6.48□□□□□ -1.37
RNU6-553P-201ENST00000364047 MBLAC2Q68D91 279 aa6.48□□□□□ -1.37
RNU6-553P-201ENST00000364047 FRS2Q8WU20 508 aa6.48□□□□□ -1.37
RNU6-553P-201ENST00000364047 C8orf37Q96NL8 207 aa6.48□□□□□ -1.37
RNU6-553P-201ENST00000364047 MMP19Q99542 508 aa6.48□□□□□ -1.37
RNU6-553P-201ENST00000364047 PPP1R1BQ9UD71 204 aaPredicted RBP6.48□□□□□ -1.37
RNU6-553P-201ENST00000364047 DBR1Q9UK59 544 aaKnown RBP6.48□□□□□ -1.37
RNU6-553P-201ENST00000364047 CNOT6Q9ULM6 557 aaKnown RBP6.48□□□□□ -1.37
RNU6-553P-201ENST00000364047 BTBD11A6QL63 1104 aa6.47□□□□□ -1.37
RNU6-553P-201ENST00000364047 F8W031 263 aaPredicted RBP6.47□□□□□ -1.37
RNU6-553P-201ENST00000364047 N4BP3O15049 544 aa6.47□□□□□ -1.37
RNU6-553P-201ENST00000364047 GLI4P10075 376 aa6.47□□□□□ -1.37
RNU6-553P-201ENST00000364047 ATP2B1P20020 1258 aa6.47□□□□□ -1.37
RNU6-553P-201ENST00000364047 KCNJ6P48051 423 aa6.47□□□□□ -1.37
RNU6-553P-201ENST00000364047 CYP4F3Q08477 520 aa6.47□□□□□ -1.37
RNU6-553P-201ENST00000364047 LDHDQ86WU2 507 aa6.47□□□□□ -1.37
RNU6-553P-201ENST00000364047 C1QL4Q86Z23 238 aa6.47□□□□□ -1.37
RNU6-553P-201ENST00000364047 CKAP2LQ8IYA6 745 aa6.47□□□□□ -1.37
RNU6-553P-201ENST00000364047 NPLOC4Q8TAT6 608 aa6.47□□□□□ -1.37
RNU6-553P-201ENST00000364047 USP33Q8TEY7 942 aa6.47□□□□□ -1.37
RNU6-553P-201ENST00000364047 MZB1Q8WU39 189 aa6.47□□□□□ -1.37
RNU6-553P-201ENST00000364047 SIGLEC10Q96LC7 697 aa6.47□□□□□ -1.37
RNU6-553P-201ENST00000364047 FBLN5Q9UBX5 448 aa6.47□□□□□ -1.37
RNU6-553P-201ENST00000364047 IRAK3Q9Y616 596 aa6.47□□□□□ -1.37
RNU6-553P-201ENST00000364047 ZC3H12DA2A288 527 aaKnown RBP6.46□□□□□ -1.38
RNU6-553P-201ENST00000364047 RFXAPO00287 272 aa6.46□□□□□ -1.38
RNU6-553P-201ENST00000364047 PPP1R11O60927 126 aaPredicted RBP6.46□□□□□ -1.38
RNU6-553P-201ENST00000364047 NCKAP1LP55160 1127 aa6.46□□□□□ -1.38
RNU6-553P-201ENST00000364047 RBM10P98175 930 aaKnown RBP6.46□□□□□ -1.38
RNU6-553P-201ENST00000364047 ZNF200P98182 395 aaPredicted RBP6.46□□□□□ -1.38
RNU6-553P-201ENST00000364047 SSPNQ14714 243 aa6.46□□□□□ -1.38
RNU6-553P-201ENST00000364047 SF1Q15637 639 aaKnown RBP6.46□□□□□ -1.38
RNU6-553P-201ENST00000364047 CCDC140Q96MF4 163 aa6.46□□□□□ -1.38
RNU6-553P-201ENST00000364047 MTA3Q9BTC8 594 aa6.46□□□□□ -1.38
RNU6-553P-201ENST00000364047 RXFP1Q9HBX9 757 aa6.46□□□□□ -1.38
RNU6-553P-201ENST00000364047 BTG4Q9NY30 223 aa6.46□□□□□ -1.38
RNU6-553P-201ENST00000364047 KCTD3Q9Y597 815 aa6.46□□□□□ -1.38
RNU6-553P-201ENST00000364047 HCFC2Q9Y5Z7 792 aa6.46□□□□□ -1.38
RNU6-553P-201ENST00000364047 U2SURPO15042 1029 aaKnown RBP6.45□□□□□ -1.38
RNU6-553P-201ENST00000364047 MEFVO15553 781 aaPredicted RBP6.45□□□□□ -1.38
RNU6-553P-201ENST00000364047 CPP00450 1065 aa6.45□□□□□ -1.38
RNU6-553P-201ENST00000364047 FUCA1P04066 466 aa6.45□□□□□ -1.38
RNU6-553P-201ENST00000364047 SCG5P05408 212 aa6.45□□□□□ -1.38
RNU6-553P-201ENST00000364047 ZSCAN22P10073 491 aaPredicted RBP6.45□□□□□ -1.38
RNU6-553P-201ENST00000364047 PI3P19957 117 aa6.45□□□□□ -1.38
RNU6-553P-201ENST00000364047 GFRA1P56159 465 aa6.45□□□□□ -1.38
RNU6-553P-201ENST00000364047 PPP2R2AP63151 447 aa6.45□□□□□ -1.38
RNU6-553P-201ENST00000364047 PRR5P85299 388 aa6.45□□□□□ -1.38
RNU6-553P-201ENST00000364047 INF2Q27J81 1249 aa6.45□□□□□ -1.38
RNU6-553P-201ENST00000364047 PRSS53Q2L4Q9 553 aa6.45□□□□□ -1.38
RNU6-553P-201ENST00000364047 E4F1Q66K89 784 aaPredicted RBP6.45□□□□□ -1.38
RNU6-553P-201ENST00000364047 IQCEQ6IPM2 695 aa6.45□□□□□ -1.38
RNU6-553P-201ENST00000364047 IRF2BPLQ9H1B7 796 aa6.45□□□□□ -1.38
RNU6-553P-201ENST00000364047 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.45□□□□□ -1.38
RNU6-553P-201ENST00000364047 MARCH2Q9P0N8 246 aa6.45□□□□□ -1.38
RNU6-553P-201ENST00000364047 A0A1W2PQU0 124 aa6.44□□□□□ -1.38
RNU6-553P-201ENST00000364047 GRIA2P42262 883 aa6.44□□□□□ -1.38
RNU6-553P-201ENST00000364047 KCNAB2Q13303 367 aa6.44□□□□□ -1.38
RNU6-553P-201ENST00000364047 KRTAP19-4Q3LI73 84 aa6.44□□□□□ -1.38
RNU6-553P-201ENST00000364047 ZNF385BQ569K4 471 aa6.44□□□□□ -1.38
RNU6-553P-201ENST00000364047 WWC2Q6AWC2 1192 aa6.44□□□□□ -1.38
RNU6-553P-201ENST00000364047 LCNL1Q6ZST4 164 aa6.44□□□□□ -1.38
RNU6-553P-201ENST00000364047 IGDCC3Q8IVU1 814 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms