RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 HDGFL2Q7Z4V5 671 aaPredicted RBP4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 KRTAP1-3Q8IUG1 177 aa4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 ZC3H7AQ8IWR0 971 aaKnown RBP4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 FIBCD1Q8N539 461 aa4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 PAF1Q8N7H5 531 aa4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 GOLGA6L1Q8N7Z2 621 aa4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 IGSF22Q8N9C0 903 aa4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 KREMEN2Q8NCW0 462 aa4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 RNF141Q8WVD5 230 aa4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 HSPBAP1Q96EW2 488 aa4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 SENP7Q9BQF6 1050 aa4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 CELF4Q9BZC1 486 aaKnown RBP4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 PPCSQ9HAB8 311 aa4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 PIDD1Q9HB75 910 aa4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 CYP4F12Q9HCS2 524 aa4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 THG1LQ9NWX6 298 aaKnown RBP4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 PUF60Q9UHX1 559 aaKnown RBP4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 GGA1Q9UJY5 639 aa4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 ZBTB21Q9ULJ3 1066 aa4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 RNF112Q9ULX5 631 aa4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 ZNF652Q9Y2D9 606 aa4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 DAAM1Q9Y4D1 1078 aa4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 FRMPD2Q68DX3 1309 aaPredicted RBP4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 COL17A1Q9UMD9 1497 aaPredicted RBP4.69□□□□□ -1.66
RNU6-1249P-201ENST00000363237 RASSF10A6NK89 507 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 GSTA4O15217 222 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 DDX3YO15523 660 aaKnown RBP4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 RNGTTO60942 597 aaKnown RBP4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 ADAM11O75078 769 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 VAMP4O75379 141 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 TCEA3O75764 348 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 WFS1O76024 890 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 ALBP02768 609 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 NEFMP07197 916 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 HSPA6P17066 643 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 GRIK1P39086 918 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 ETV3P41162 512 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 GJA9P57773 515 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 ZNF280AP59817 542 aaPredicted RBP4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 POU4F1Q01851 419 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 SCRN1Q12765 414 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 TESK1Q15569 626 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 ARHGAP44Q17R89 818 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 FAM83BQ5T0W9 1011 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 KCNT2Q6UVM3 1135 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 TOGARAM2Q6ZUX3 1019 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 CMTR2Q8IYT2 770 aaKnown RBP4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 NME8Q8N427 588 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 CHST14Q8NCH0 376 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 MYRIPQ8NFW9 859 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 DNAJB8Q8NHS0 232 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 XAGE3Q8WTP9 111 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 CHTF18Q8WVB6 975 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 ISL2Q96A47 359 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 TMPRSS13Q9BYE2 586 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 GSX1Q9H4S2 264 aaPredicted RBP4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 DDX21Q9NR30 783 aaKnown RBP eCLIP4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 GPR27Q9NS67 375 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 MBIPQ9NS73 344 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 C1orf112Q9NSG2 853 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 SPTLC3Q9NUV7 552 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 MKS1Q9NXB0 559 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 PCOLCE2Q9UKZ9 415 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 AP4E1Q9UPM8 1137 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 GPR55Q9Y2T6 319 aaPredicted RBP4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 NPFFR2Q9Y5X5 522 aa4.68□□□□□ -1.66
RNU6-1249P-201ENST00000363237 TRIM75PA6NK02 468 aa4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 WDR64B1ANS9 1081 aa4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 MEFVO15553 781 aaPredicted RBP4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 PPFIA3O75145 1194 aa4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 IL33O95760 270 aa4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 CKMP06732 381 aa4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 ATP2A2P16615 1042 aaKnown RBP4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 AKAP5P24588 427 aa4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 MECP2P51608 486 aaKnown RBP4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 RBM10P98175 930 aaKnown RBP4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 SOX4Q06945 474 aaPredicted RBP4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 CYP4F3Q08477 520 aa4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 PAK1Q13153 545 aa4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 GRM3Q14832 879 aa4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 KRT72Q14CN4 511 aa4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 DUOXA2Q1HG44 320 aa4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 FOXD4L6Q3SYB3 417 aaPredicted RBP4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 TMEM177Q53S58 311 aa4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 FAM47CQ5HY64 1035 aa4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 NUTM2GQ5VZR2 741 aa4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 E4F1Q66K89 784 aaPredicted RBP4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 DENND5AQ6IQ26 1287 aa4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 ERAP2Q6P179 960 aa4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 FOXD4L3Q6VB84 417 aaPredicted RBP4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 SLCO4C1Q6ZQN7 724 aa4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 ARMCX6Q7L4S7 300 aa4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 PPIL6Q8IXY8 311 aa4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 SMAP1Q8IYB5 467 aaPredicted RBP4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 CLRN3Q8NCR9 226 aa4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 SMG8Q8ND04 991 aaKnown RBP4.67□□□□□ -1.66
RNU6-1249P-201ENST00000363237 PANK1Q8TE04 598 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms