RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 TYRO3Q06418 890 aa2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 ALKBH2Q6NS38 261 aa2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 CDH24Q86UP0 819 aa2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 DPF3Q92784 378 aa2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 SUSD3Q96L08 255 aa2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 P2RX7Q99572 595 aaKnown RBP2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 TM9SF2Q99805 663 aa2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 DHRS4Q9BTZ2 278 aa2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 PCGF6Q9BYE7 350 aa2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 PRDM12Q9H4Q4 367 aa2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 ELAC1Q9H777 363 aaKnown RBP2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 KMT5AQ9NQR1 393 aa2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 AAASQ9NRG9 546 aa2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 ITSN1Q15811 1721 aa2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 M0R3H8 397 aa2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 DLX3O60479 287 aa2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 UBOX5O94941 541 aa2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 STT3AP46977 705 aa2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 TRIM60Q495X7 471 aa2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 FAM26EQ8N5C1 309 aa2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 MKNK1Q9BUB5 465 aa2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 LSM14BQ9BX40 385 aaKnown RBP2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 ZDHHC3Q9NYG2 299 aa2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 SOX13Q9UN79 622 aa2.44□□□□□ -2.02
SMARCAD1-202ENST00000359052 SLC22A31A6NKX4 558 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 POLD1P28340 1107 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 GRK6P43250 576 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 DSC2Q02487 901 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 MPRIPQ6WCQ1 1025 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 OR1N1Q8NGS0 311 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 SSH3Q8TE77 659 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 HHIPQ96QV1 700 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 SRPK1Q96SB4 655 aaKnown RBP2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 HERPUD2Q9BSE4 406 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 RNPEPQ9H4A4 650 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 BLOC1S4Q9NUP1 217 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 EMC9Q9Y3B6 208 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 PZPP20742 1482 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 BRWD3Q6RI45 1802 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 KDM2BQ8NHM5 1336 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 C5P01031 1676 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 NCOA3Q9Y6Q9 1424 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 NUTM2BA6NNL0 878 aaPredicted RBP2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 NUTM2EB1AL46 878 aaPredicted RBP2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 MYL1P05976 194 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 CTSBP07858 339 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 AKAP5P24588 427 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 ATP13A4Q4VNC1 1196 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 NUTM2DQ5VT03 806 aaPredicted RBP2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 TRIM67Q6ZTA4 783 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 NBPF11Q86T75 865 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 NUTM2AQ8IVF1 878 aaPredicted RBP2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 NAT8LQ8N9F0 302 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 BAHD1Q8TBE0 780 aaPredicted RBP2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 CLIP1P30622 1438 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 LRP5O75197 1615 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 TAF4O00268 1085 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 KCNQ3O43525 872 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 RHOQP17081 205 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 TGM1P22735 817 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 NOP2P46087 812 aaKnown RBP2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 HGSNATQ68CP4 663 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 BBS12Q6ZW61 710 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 CNTD1Q8N815 330 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 ARMC2Q8NEN0 867 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 CYP2W1Q8TAV3 490 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 FUBP3Q96I24 572 aaKnown RBP eCLIP2.43□□□□□ -2.026e-11■■□□□ 12
SMARCAD1-202ENST00000359052 PSMG3-AS1Q96PY0 264 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 PAGR1Q9BTK6 254 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 CSRNP2Q9H175 543 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 TMPRSS4Q9NRS4 437 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 METRNQ9UJH8 293 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 LRRC9Q6ZRR7 1453 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 PLEKHH2Q8IVE3 1493 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 RBBP6Q7Z6E9 1792 aaKnown RBP2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 TCRBV5S4A2TA0A5A2 114 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 C22orf31O95567 290 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 CD4P01730 458 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 ADCYAP1R1P41586 468 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 FLYWCH1Q4VC44 716 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 NBPF12Q5TAG4 269 aaPredicted RBP2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 CENPIQ92674 756 aaPredicted RBP2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 NXPE3Q969Y0 559 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 RUSC1Q9BVN2 902 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 ZCCHC2Q9C0B9 1178 aaKnown RBP2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.43□□□□□ -2.023e-6■■■■■ 31.2
SMARCAD1-202ENST00000359052 DENND2AQ9ULE3 1009 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 NUB1Q9Y5A7 615 aa2.43□□□□□ -2.02
SMARCAD1-202ENST00000359052 C4AP0C0L4 1744 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 C4BP0C0L5 1744 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 NCAPD2Q15021 1401 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 J3KRW8 73 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 ORC4O43929 436 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 USO1O60763 962 aaKnown RBP2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 CYP2E1P05181 493 aaPredicted RBP2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 LTKP29376 864 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 GPC1P35052 558 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 PSMA6P60900 246 aaKnown RBP2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 WDR44Q5JSH3 913 aa2.42□□□□□ -2.02
SMARCAD1-202ENST00000359052 RRP12Q5JTH9 1297 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms