RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 SPATA5Q8NB90 893 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 NXF1Q9UBU9 619 aaKnown RBP6.31□□□□□ -1.4
BRCA1-203ENST00000357654 PTPN22Q9Y2R2 807 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 CAPN2P17655 700 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 IREB2P48200 963 aaKnown RBP6.31□□□□□ -1.4
BRCA1-203ENST00000357654 RBBP7Q16576 425 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 CDO1Q16878 200 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 TTC23LQ6PF05 361 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 SLC26A7Q8TE54 656 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 ZMAT2Q96NC0 199 aaKnown RBP6.31□□□□□ -1.4
BRCA1-203ENST00000357654 RPF1Q9H9Y2 349 aaKnown RBP6.31□□□□□ -1.4
BRCA1-203ENST00000357654 NDFIP2Q9NV92 336 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 ANGEL1Q9UNK9 670 aaKnown RBP6.31□□□□□ -1.4
BRCA1-203ENST00000357654 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-203ENST00000357654 SPDYE5A6NIY4 337 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 ZBTB7AO95365 584 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 NFKBIAP25963 317 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 NMIQ13287 307 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-203ENST00000357654 DRP2Q13474 957 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 SPDYE7PQ495Y7 208 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 SPOPLQ6IQ16 392 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 LMNTD2Q8IXW0 634 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 THOC2Q8NI27 1593 aaKnown RBP6.31□□□□□ -1.4
BRCA1-203ENST00000357654 DNAJC25Q9H1X3 360 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 GPBP1L1Q9HC44 474 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-203ENST00000357654 C1orf112Q9NSG2 853 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 RNF181Q9P0P0 153 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 V9GY48 417 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-203ENST00000357654 CCDC171Q6TFL3 1326 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 NPHP3Q7Z494 1330 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 F8W8V4 182 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 SPTLC1O15269 473 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 ORC4O43929 436 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 TRPA1O75762 1119 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 CPB1P15086 417 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 TRIM48Q8IWZ4 208 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 MYL10Q9BUA6 226 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 BCL2L14Q9BZR8 327 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 ZNF215Q9UL58 517 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-203ENST00000357654 GIGYF1O75420 1035 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-203ENST00000357654 TFAMQ00059 246 aaKnown RBP6.31□□□□□ -1.4
BRCA1-203ENST00000357654 SNX1Q13596 522 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 RCSD1Q6JBY9 416 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 FBXO18Q8NFZ0 1043 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 ZNF507Q8TCN5 953 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 NLRP4Q96MN2 994 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 DACH2Q96NX9 599 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 LSM14BQ9BX40 385 aaKnown RBP6.31□□□□□ -1.4
BRCA1-203ENST00000357654 TEX12Q9BXU0 123 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 BLZF1Q9H2G9 400 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 PLEKHH1Q9ULM0 1364 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 RNF113AO15541 343 aaKnown RBP6.31□□□□□ -1.4
BRCA1-203ENST00000357654 SNX2O60749 519 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 DCTN3O75935 186 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 IMPDH2P12268 514 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 NLRP9Q7RTR0 991 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 TAS2R42Q7RTR8 314 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 KIF17Q9P2E2 1029 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 DDX41Q9UJV9 622 aaKnown RBP6.31□□□□□ -1.4
BRCA1-203ENST00000357654 TRAF3IP3Q9Y228 551 aa6.31□□□□□ -1.4
BRCA1-203ENST00000357654 NBPF26B4DH59 902 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 TIPRLO75663 272 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 PDE6CP51160 858 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 TBC1D8BQ0IIM8 1120 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 TBL3Q12788 808 aaKnown RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 CUL1Q13616 776 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 PHKG1Q16816 387 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 CWF19L2Q2TBE0 894 aaKnown RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 CERKLQ49MI3 558 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 DALRD3Q5D0E6 543 aaKnown RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 GAS2L3Q86XJ1 694 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 RFWD2Q8NHY2 731 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 CHURC1Q8WUH1 139 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 CCDC124Q96CT7 223 aaKnown RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 IFIH1Q9BYX4 1025 aaKnown RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 TRIM45Q9H8W5 580 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 DBNDD1Q9H9R9 158 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 MAP3K20Q9NYL2 800 aaKnown RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 KIF21BO75037 1637 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 CC2D2AQ9P2K1 1620 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 KRT7P08729 469 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 PPP3CCP48454 512 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 LLGL1Q15334 1064 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 SF3B3Q15393 1217 aaKnown RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 MIIPQ5JXC2 388 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 TEX9Q8N6V9 391 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 ZNF594Q96JF6 807 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 ZNF304Q9HCX3 659 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 CD58P19256 250 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 CIITAP33076 1130 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 PPP2R3AQ06190 1150 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 SPAG1Q07617 926 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 MFSD14BQ5SR56 506 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 ADALQ6DHV7 355 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 MRPS27Q92552 414 aaKnown RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 EXOC4Q96A65 974 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 ZNF668Q96K58 619 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 HEXIM2Q96MH2 286 aaKnown RBP6.3□□□□□ -1.4
BRCA1-203ENST00000357654 FRMD6Q96NE9 622 aa6.3□□□□□ -1.4
BRCA1-203ENST00000357654 MTIF3Q9H2K0 278 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms