RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 FOXD4L5Q5VV16 416 aaPredicted RBP29.14■■■□□ 2.25
SSBP3-202ENST00000357475 BLIDQ8IZY5 108 aa29.14■■■□□ 2.25
SSBP3-202ENST00000357475 FOXD4L4Q8WXT5 416 aaPredicted RBP29.14■■■□□ 2.25
SSBP3-202ENST00000357475 WBP1LQ9NX94 342 aa29.14■■■□□ 2.25
SSBP3-202ENST00000357475 HSD17B4P51659 736 aa29.13■■■□□ 2.25
SSBP3-202ENST00000357475 RPS6P62753 249 aaKnown RBP29.13■■■□□ 2.25
SSBP3-202ENST00000357475 RNF207Q6ZRF8 634 aa29.13■■■□□ 2.25
SSBP3-202ENST00000357475 DAGLBQ8NCG7 672 aa29.13■■■□□ 2.25
SSBP3-202ENST00000357475 SAGE1Q9NXZ1 904 aa29.13■■■□□ 2.25
SSBP3-202ENST00000357475 CYP39A1Q9NYL5 469 aa29.13■■■□□ 2.25
SSBP3-202ENST00000357475 PCDHA6Q9UN73 950 aa29.13■■■□□ 2.25
SSBP3-202ENST00000357475 PCDHA8Q9Y5H6 950 aa29.13■■■□□ 2.25
SSBP3-202ENST00000357475 CALML3P27482 149 aa29.12■■■□□ 2.25
SSBP3-202ENST00000357475 CLK2P49760 499 aaKnown RBP29.12■■■□□ 2.25
SSBP3-202ENST00000357475 EARS2Q5JPH6 523 aaKnown RBP29.12■■■□□ 2.25
SSBP3-202ENST00000357475 JAKMIP3Q5VZ66 844 aa29.12■■■□□ 2.25
SSBP3-202ENST00000357475 GPR142Q7Z601 462 aa29.12■■■□□ 2.25
SSBP3-202ENST00000357475 FERMT3Q86UX7 667 aa29.12■■■□□ 2.25
SSBP3-202ENST00000357475 FBXO40Q9UH90 709 aa29.12■■■□□ 2.25
SSBP3-202ENST00000357475 ZDHHC9Q9Y397 364 aa29.12■■■□□ 2.25
SSBP3-202ENST00000357475 FAM205CA6NFA0 338 aa29.11■■■□□ 2.25
SSBP3-202ENST00000357475 GCOM1H8Y6P7 765 aaPredicted RBP29.11■■■□□ 2.25
SSBP3-202ENST00000357475 POLR2MP0CAP2 368 aa29.11■■■□□ 2.25
SSBP3-202ENST00000357475 GNA11P29992 359 aa29.11■■■□□ 2.25
SSBP3-202ENST00000357475 COPB2P35606 906 aa29.11■■■□□ 2.25
SSBP3-202ENST00000357475 KRT2P35908 639 aa29.11■■■□□ 2.25
SSBP3-202ENST00000357475 MRPL12P52815 198 aaKnown RBP29.11■■■□□ 2.25
SSBP3-202ENST00000357475 GHRHRQ02643 423 aa29.11■■■□□ 2.25
SSBP3-202ENST00000357475 MCF2L2Q86YR7 1114 aa29.11■■■□□ 2.25
SSBP3-202ENST00000357475 CCAR1Q8IX12 1150 aaKnown RBP29.11■■■□□ 2.25
SSBP3-202ENST00000357475 FAM177A1Q8N128 213 aaPredicted RBP29.11■■■□□ 2.25
SSBP3-202ENST00000357475 ANKRD35Q8N283 1001 aa29.11■■■□□ 2.25
SSBP3-202ENST00000357475 SYTL5Q8TDW5 730 aaPredicted RBP29.11■■■□□ 2.25
SSBP3-202ENST00000357475 TNFRSF25Q93038 417 aa29.11■■■□□ 2.25
SSBP3-202ENST00000357475 MMP19Q99542 508 aa29.11■■■□□ 2.25
SSBP3-202ENST00000357475 PIK3CDO00329 1044 aa29.1■■■□□ 2.25
SSBP3-202ENST00000357475 LACTBP83111 547 aaPredicted RBP29.1■■■□□ 2.25
SSBP3-202ENST00000357475 MCTP1Q6DN14 999 aa29.1■■■□□ 2.25
SSBP3-202ENST00000357475 FCHSD1Q86WN1 690 aa29.1■■■□□ 2.25
SSBP3-202ENST00000357475 REXO1Q8N1G1 1221 aaKnown RBP29.1■■■□□ 2.25
SSBP3-202ENST00000357475 RGS22Q8NE09 1264 aa29.1■■■□□ 2.25
SSBP3-202ENST00000357475 PLXNA1Q9UIW2 1896 aa29.1■■■□□ 2.25
SSBP3-202ENST00000357475 GPR25O00155 361 aa29.1■■■□□ 2.25
SSBP3-202ENST00000357475 PGK2P07205 417 aa29.1■■■□□ 2.25
SSBP3-202ENST00000357475 MAPK4P31152 587 aa29.1■■■□□ 2.25
SSBP3-202ENST00000357475 GALNT17Q6IS24 598 aa29.1■■■□□ 2.25
SSBP3-202ENST00000357475 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.1■■■□□ 2.252e-6■■■□□ 18.9
SSBP3-202ENST00000357475 SP3Q02447 781 aa29.09■■■□□ 2.25
SSBP3-202ENST00000357475 PLEKHH3Q7Z736 793 aa29.09■■■□□ 2.25
SSBP3-202ENST00000357475 MYH7BA7E2Y1 1941 aa29.08■■■□□ 2.25
SSBP3-202ENST00000357475 FCER1AP12319 257 aa29.08■■■□□ 2.25
SSBP3-202ENST00000357475 PTPREP23469 700 aa29.08■■■□□ 2.25
SSBP3-202ENST00000357475 CNTN2Q02246 1040 aa29.08■■■□□ 2.25
SSBP3-202ENST00000357475 SAFBQ15424 915 aaKnown RBP eCLIP29.08■■■□□ 2.25
SSBP3-202ENST00000357475 TRIM47Q96LD4 638 aa29.08■■■□□ 2.25
SSBP3-202ENST00000357475 BEGAINQ9BUH8 593 aa29.08■■■□□ 2.25
SSBP3-202ENST00000357475 ASTN1O14525 1302 aa29.08■■■□□ 2.25
SSBP3-202ENST00000357475 ZNF236Q9UL36 1845 aa29.07■■■□□ 2.24
SSBP3-202ENST00000357475 KCTD2Q14681 263 aa29.07■■■□□ 2.24
SSBP3-202ENST00000357475 BICD2Q8TD16 824 aa29.07■■■□□ 2.24
SSBP3-202ENST00000357475 TAAR1Q96RJ0 339 aa29.07■■■□□ 2.24
SSBP3-202ENST00000357475 DDX49Q9Y6V7 483 aaKnown RBP29.07■■■□□ 2.24
SSBP3-202ENST00000357475 BRD1O95696 1058 aa29.06■■■□□ 2.24
SSBP3-202ENST00000357475 ADORA2AP29274 412 aa29.06■■■□□ 2.24
SSBP3-202ENST00000357475 PSMC4P43686 418 aa29.06■■■□□ 2.24
SSBP3-202ENST00000357475 RESTQ13127 1097 aa29.06■■■□□ 2.24
SSBP3-202ENST00000357475 GRB14Q14449 540 aa29.06■■■□□ 2.24
SSBP3-202ENST00000357475 JMYQ8N9B5 988 aa29.06■■■□□ 2.24
SSBP3-202ENST00000357475 PFASO15067 1338 aa29.06■■■□□ 2.24
SSBP3-202ENST00000357475 MYH15Q9Y2K3 1946 aa29.06■■■□□ 2.24
SSBP3-202ENST00000357475 DNAJC25-GNG10A0A024R161 153 aa29.05■■■□□ 2.24
SSBP3-202ENST00000357475 COBLO75128 1261 aa29.05■■■□□ 2.24
SSBP3-202ENST00000357475 ZSCAN22P10073 491 aaPredicted RBP29.05■■■□□ 2.24
SSBP3-202ENST00000357475 U2AF2P26368 475 aaKnown RBP eCLIP29.05■■■□□ 2.24
SSBP3-202ENST00000357475 PIK3AP1Q6ZUJ8 805 aa29.05■■■□□ 2.24
SSBP3-202ENST00000357475 CD99L2Q8TCZ2 262 aa29.05■■■□□ 2.24
SSBP3-202ENST00000357475 ZNF296Q8WUU4 475 aaPredicted RBP29.05■■■□□ 2.24
SSBP3-202ENST00000357475 FGD4Q96M96 766 aa29.05■■■□□ 2.24
SSBP3-202ENST00000357475 GLT8D2Q9H1C3 349 aa29.05■■■□□ 2.24
SSBP3-202ENST00000357475 FOXP1Q9H334 677 aaPredicted RBP29.05■■■□□ 2.24
SSBP3-202ENST00000357475 BRMS1Q9HCU9 246 aa29.05■■■□□ 2.24
SSBP3-202ENST00000357475 UBXN2AP68543 259 aa29.04■■■□□ 2.24
SSBP3-202ENST00000357475 ANO3Q9BYT9 981 aa29.04■■■□□ 2.24
SSBP3-202ENST00000357475 IVNS1ABPQ9Y6Y0 642 aa29.04■■■□□ 2.24
SSBP3-202ENST00000357475 SOWAHBA6NEL2 793 aa29.04■■■□□ 2.24
SSBP3-202ENST00000357475 TNPO2O14787 897 aaKnown RBP29.04■■■□□ 2.24
SSBP3-202ENST00000357475 MORN1Q5T089 497 aa29.04■■■□□ 2.24
SSBP3-202ENST00000357475 FAM173BQ6P4H8 233 aa29.04■■■□□ 2.24
SSBP3-202ENST00000357475 NOSTRINQ8IVI9 506 aa29.04■■■□□ 2.24
SSBP3-202ENST00000357475 FAM133AQ8N9E0 248 aa29.04■■■□□ 2.24
SSBP3-202ENST00000357475 STRNO43815 780 aa29.03■■■□□ 2.24
SSBP3-202ENST00000357475 EDIL3O43854 480 aa29.03■■■□□ 2.24
SSBP3-202ENST00000357475 FCGRTP55899 365 aa29.03■■■□□ 2.24
SSBP3-202ENST00000357475 GNL2Q13823 731 aaKnown RBP29.03■■■□□ 2.24
SSBP3-202ENST00000357475 ABRAQ8N0Z2 381 aa29.03■■■□□ 2.24
SSBP3-202ENST00000357475 SAMD3Q8N6K7 520 aa29.03■■■□□ 2.24
SSBP3-202ENST00000357475 MAP3K20Q9NYL2 800 aaKnown RBP29.03■■■□□ 2.24
SSBP3-202ENST00000357475 MCM3APO60318 1980 aa29.02■■■□□ 2.24
SSBP3-202ENST00000357475 SLC15A5A6NIM6 579 aa29.02■■■□□ 2.24
SSBP3-202ENST00000357475 SPDYE3A6NKU9 549 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms