RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 USP44Q9H0E7 712 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 FAM184BQ9ULE4 1060 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 VPS13CQ709C8 3753 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 PNMA6EA0A0J9YXQ4 647 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 ACRP10323 421 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 RNASELQ05823 741 aaKnown RBP4.37□□□□□ -1.71
SMC1B-201ENST00000357450 KIAA1841Q6NSI8 718 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 CATIPQ7Z7H3 387 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 RSPH3Q86UC2 560 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 RPAP2Q8IXW5 612 aaPredicted RBP4.37□□□□□ -1.71
SMC1B-201ENST00000357450 TDRD7Q8NHU6 1098 aaKnown RBP4.37□□□□□ -1.71
SMC1B-201ENST00000357450 ATG4CQ96DT6 458 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 CCDC17Q96LX7 622 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 YME1L1Q96TA2 773 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 GBP3Q9H0R5 595 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 CASP8AP2Q9UKL3 1982 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 PIEZO1Q92508 2521 aa4.37□□□□□ -1.71
SMC1B-201ENST00000357450 SPDYE5A6NIY4 337 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 ENTPD3O75355 529 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 FECHP22830 423 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 ZNF445P59923 1031 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 PPP2R5BQ15173 497 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 IFIT1BQ5T764 474 aaKnown RBP4.36□□□□□ -1.71
SMC1B-201ENST00000357450 TMEM199Q8N511 208 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 CERS5Q8N5B7 392 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 JMYQ8N9B5 988 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 AGXT2Q9BYV1 514 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 RNF146Q9NTX7 359 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 TMEM63CQ9P1W3 806 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 MROH7-TTC4A0A0A0MT08 1334 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 CT47B1P0C2W7 299 aaPredicted RBP4.36□□□□□ -1.71
SMC1B-201ENST00000357450 GOLGA8HP0CJ92 632 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 PDE6AP16499 860 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 BACE1P56817 501 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 NCBP1Q09161 790 aaKnown RBP4.36□□□□□ -1.71
SMC1B-201ENST00000357450 MTX1Q13505 466 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.36□□□□□ -1.71
SMC1B-201ENST00000357450 CREBRFQ8IUR6 639 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 PPP1R13LQ8WUF5 828 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 FAM193BQ96PV7 902 aaPredicted RBP4.36□□□□□ -1.71
SMC1B-201ENST00000357450 SLC4A7Q9Y6M7 1214 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 NID2Q14112 1375 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 TRIOO75962 3097 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 DDTLA6NHG4 134 aaPredicted RBP4.36□□□□□ -1.71
SMC1B-201ENST00000357450 POTECB2RU33 542 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 MSCO60682 206 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 KRT18P05783 430 aaKnown RBP4.36□□□□□ -1.71
SMC1B-201ENST00000357450 CALM1P0DP23 149 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 CALM2P0DP24 149 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 CALM3P0DP25 149 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 BMP3P12645 472 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 EIF2AK2P19525 551 aaKnown RBP4.36□□□□□ -1.71
SMC1B-201ENST00000357450 SMCPP49901 116 aaPredicted RBP4.36□□□□□ -1.71
SMC1B-201ENST00000357450 TRAF1Q13077 416 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 TMEM179Q6ZVK1 233 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 Q7L0L9 218 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 HEATR3Q7Z4Q2 680 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 FAM184AQ8NB25 1140 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 PCSK9Q8NBP7 692 aaKnown RBP4.36□□□□□ -1.71
SMC1B-201ENST00000357450 PXYLP1Q8TE99 480 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 UBA5Q9GZZ9 404 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 OSBPL5Q9H0X9 879 aaPredicted RBP4.36□□□□□ -1.71
SMC1B-201ENST00000357450 FBXO40Q9UH90 709 aa4.36□□□□□ -1.71
SMC1B-201ENST00000357450 DICER1Q9UPY3 1922 aaKnown RBP4.36□□□□□ -1.71
SMC1B-201ENST00000357450 CNOT1A5YKK6 2376 aaKnown RBP4.35□□□□□ -1.71
SMC1B-201ENST00000357450 RAB11FIP3O75154 756 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 CYP2D6P10635 497 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 XBP1P17861 261 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 PTPRAP18433 802 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 MARK3P27448 753 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 ADORA2AP29274 412 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 CLCN1P35523 988 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 CAP2P40123 477 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 ERVK-9P63128 1117 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 ERVK-24P63145 666 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 TLE2Q04725 743 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 HABP4Q5JVS0 413 aaKnown RBP4.35□□□□□ -1.71
SMC1B-201ENST00000357450 FAM83AQ86UY5 434 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 MICU3Q86XE3 530 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 SHCBP1Q8NEM2 672 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 OR6J1Q8NGC5 347 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 ACER1Q8TDN7 264 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 C7orf43Q8WVR3 580 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 TNPO1Q92973 898 aaKnown RBP4.35□□□□□ -1.71
SMC1B-201ENST00000357450 SLF1Q9BQI6 1058 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 TCHPQ9BT92 498 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 TRIM6Q9C030 488 aaPredicted RBP4.35□□□□□ -1.71
SMC1B-201ENST00000357450 TMEM134Q9H6X4 195 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 SUGCTQ9HAC7 445 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 PIDD1Q9HB75 910 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 FBXO28Q9NVF7 368 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 GABRQQ9UN88 632 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 ZNF609O15014 1411 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 PRKAB2O43741 272 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 STAT2P52630 851 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 TNFAIP2Q03169 654 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 CTDSPL2Q05D32 466 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 CLUL1Q15846 466 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 GNPTABQ3T906 1256 aa4.35□□□□□ -1.71
SMC1B-201ENST00000357450 TMEM67Q5HYA8 995 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms