RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 CTAGE6Q86UF2 777 aa8.47□□□□□ -1.05
C11orf54-202ENST00000354421 SGMS1Q86VZ5 419 aa8.47□□□□□ -1.05
C11orf54-202ENST00000354421 NOSTRINQ8IVI9 506 aa8.47□□□□□ -1.05
C11orf54-202ENST00000354421 CTAGE4Q8IX94 777 aa8.47□□□□□ -1.05
C11orf54-202ENST00000354421 WASF1Q92558 559 aa8.47□□□□□ -1.05
C11orf54-202ENST00000354421 BAP1Q92560 729 aa8.47□□□□□ -1.05
C11orf54-202ENST00000354421 NAPGQ99747 312 aaPredicted RBP8.47□□□□□ -1.05
C11orf54-202ENST00000354421 SAMSN1Q9NSI8 373 aaKnown RBP8.47□□□□□ -1.05
C11orf54-202ENST00000354421 ADD3Q9UEY8 706 aaKnown RBP8.47□□□□□ -1.05
C11orf54-202ENST00000354421 UBN2Q6ZU65 1347 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 GOLGA8AA7E2F4 631 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 RNF225M0QZC1 329 aaPredicted RBP8.46□□□□□ -1.05
C11orf54-202ENST00000354421 TEX33O43247 280 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 GPAA1O43292 621 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 ZBTB43O43298 467 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 RANBP6O60518 1105 aaKnown RBP8.46□□□□□ -1.05
C11orf54-202ENST00000354421 N4BP1O75113 896 aaKnown RBP8.46□□□□□ -1.05
C11orf54-202ENST00000354421 TIMP2P16035 220 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 TOB1P50616 345 aaPredicted RBP8.46□□□□□ -1.05
C11orf54-202ENST00000354421 WDR4P57081 412 aaKnown RBP8.46□□□□□ -1.05
C11orf54-202ENST00000354421 VSNL1P62760 191 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 SSRP1Q08945 709 aaKnown RBP8.46□□□□□ -1.05
C11orf54-202ENST00000354421 NOGQ13253 232 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 CUL4BQ13620 913 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 ALX1Q15699 326 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 SLC9C2Q5TAH2 1124 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 LRRC31Q6UY01 552 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 TMTC1Q8IUR5 882 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 TBC1D10CQ8IV04 446 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 CNGA4Q8IV77 575 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 TRMT44Q8IYL2 757 aaKnown RBP8.46□□□□□ -1.05
C11orf54-202ENST00000354421 TTC5Q8N0Z6 440 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 SLC35F6Q8N357 371 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 IGSF22Q8N9C0 903 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 CTCFLQ8NI51 663 aaPredicted RBP8.46□□□□□ -1.05
C11orf54-202ENST00000354421 FAM174AQ8TBP5 190 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 IGDCC4Q8TDY8 1250 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 CTAGE1Q96RT6 745 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 FOXP1Q9H334 677 aaPredicted RBP8.46□□□□□ -1.05
C11orf54-202ENST00000354421 ZSWIM4Q9H7M6 989 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 BRMS1Q9HCU9 246 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 LZTFL1Q9NQ48 299 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 PCDHGC3Q9UN70 934 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 TBC1D2BQ9UPU7 963 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 HCN4Q9Y3Q4 1203 aa8.46□□□□□ -1.05
C11orf54-202ENST00000354421 SRPRBQ9Y5M8 271 aaKnown RBP8.46□□□□□ -1.05
C11orf54-202ENST00000354421 EIF3CLB5ME19 914 aaKnown RBP8.46□□□□□ -1.06
C11orf54-202ENST00000354421 POLR2DO15514 142 aaKnown RBP8.46□□□□□ -1.06
C11orf54-202ENST00000354421 MMP1P03956 469 aa8.46□□□□□ -1.06
C11orf54-202ENST00000354421 TATP17735 454 aaPredicted RBP8.46□□□□□ -1.06
C11orf54-202ENST00000354421 ARHGAP25P42331 645 aa8.46□□□□□ -1.06
C11orf54-202ENST00000354421 LIFRP42702 1097 aa8.46□□□□□ -1.06
C11orf54-202ENST00000354421 AMPD2Q01433 879 aa8.46□□□□□ -1.06
C11orf54-202ENST00000354421 FKBP4Q02790 459 aaKnown RBP eCLIP8.46□□□□□ -1.06
C11orf54-202ENST00000354421 TTC31Q49AM3 519 aaPredicted RBP8.46□□□□□ -1.06
C11orf54-202ENST00000354421 FILIP1LQ4L180 1135 aa8.46□□□□□ -1.06
C11orf54-202ENST00000354421 HSP90B2PQ58FF3 399 aa8.46□□□□□ -1.06
C11orf54-202ENST00000354421 RILPL1Q5EBL4 403 aa8.46□□□□□ -1.06
C11orf54-202ENST00000354421 ICE2Q659A1 982 aa8.46□□□□□ -1.06
C11orf54-202ENST00000354421 Q7L0L9 218 aa8.46□□□□□ -1.06
C11orf54-202ENST00000354421 SH3RF1Q7Z6J0 888 aa8.46□□□□□ -1.06
C11orf54-202ENST00000354421 AMIGO3Q86WK7 504 aa8.46□□□□□ -1.06
C11orf54-202ENST00000354421 IFNL2Q8IZJ0 200 aa8.46□□□□□ -1.06
C11orf54-202ENST00000354421 RAPGEF4Q8WZA2 1011 aa8.46□□□□□ -1.06
C11orf54-202ENST00000354421 XAGE2Q96GT9 111 aa8.46□□□□□ -1.06
C11orf54-202ENST00000354421 PURBQ96QR8 312 aaKnown RBP8.46□□□□□ -1.06
C11orf54-202ENST00000354421 EIF3CQ99613 913 aaKnown RBP8.46□□□□□ -1.06
C11orf54-202ENST00000354421 PUS7LQ9H0K6 701 aaKnown RBP8.46□□□□□ -1.06
C11orf54-202ENST00000354421 LY9Q9HBG7 655 aa8.46□□□□□ -1.06
C11orf54-202ENST00000354421 RNF186Q9NXI6 227 aa8.46□□□□□ -1.06
C11orf54-202ENST00000354421 CEP131Q9UPN4 1083 aa8.46□□□□□ -1.06
C11orf54-202ENST00000354421 MYH7P12883 1935 aa8.45□□□□□ -1.06
C11orf54-202ENST00000354421 A0A0U1RQJ8 604 aa8.45□□□□□ -1.06
C11orf54-202ENST00000354421 PPFIA4O75335 1185 aa8.45□□□□□ -1.06
C11orf54-202ENST00000354421 IFNAR1P17181 557 aa8.45□□□□□ -1.06
C11orf54-202ENST00000354421 MCM3P25205 808 aa8.45□□□□□ -1.06
C11orf54-202ENST00000354421 ADORA1P30542 326 aa8.45□□□□□ -1.06
C11orf54-202ENST00000354421 ADD2P35612 726 aa8.45□□□□□ -1.06
C11orf54-202ENST00000354421 ZAP70P43403 619 aa8.45□□□□□ -1.06
C11orf54-202ENST00000354421 TRIM14Q14142 442 aa8.45□□□□□ -1.06
C11orf54-202ENST00000354421 SAFBQ15424 915 aaKnown RBP eCLIP8.45□□□□□ -1.06
C11orf54-202ENST00000354421 ERFEQ4G0M1 354 aa8.45□□□□□ -1.06
C11orf54-202ENST00000354421 HSP90AA4PQ58FG1 418 aa8.45□□□□□ -1.06
C11orf54-202ENST00000354421 SAPCD2Q86UD0 394 aa8.45□□□□□ -1.06
C11orf54-202ENST00000354421 PNMA8AQ86V59 439 aaPredicted RBP8.45□□□□□ -1.06
C11orf54-202ENST00000354421 ATRIPQ8WXE1 791 aa8.45□□□□□ -1.06
C11orf54-202ENST00000354421 PPM1EQ8WY54 764 aa8.45□□□□□ -1.06
C11orf54-202ENST00000354421 PHKBQ93100 1093 aa8.45□□□□□ -1.06
C11orf54-202ENST00000354421 ZNF594Q96JF6 807 aaPredicted RBP8.45□□□□□ -1.06
C11orf54-202ENST00000354421 ZNF512BQ96KM6 892 aaPredicted RBP8.45□□□□□ -1.06
C11orf54-202ENST00000354421 ZIC5Q96T25 663 aa8.45□□□□□ -1.06
C11orf54-202ENST00000354421 PUS3Q9BZE2 481 aaKnown RBP8.45□□□□□ -1.06
C11orf54-202ENST00000354421 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.45□□□□□ -1.06
C11orf54-202ENST00000354421 AATFQ9NY61 560 aaKnown RBP eCLIP8.45□□□□□ -1.06
C11orf54-202ENST00000354421 LIMA1Q9UHB6 759 aaKnown RBP8.45□□□□□ -1.06
C11orf54-202ENST00000354421 ADAMTSL1Q8N6G6 1762 aa8.45□□□□□ -1.06
C11orf54-202ENST00000354421 SYNRGQ9UMZ2 1314 aa8.44□□□□□ -1.06
C11orf54-202ENST00000354421 LRRIQ3A6PVS8 624 aaPredicted RBP8.44□□□□□ -1.06
C11orf54-202ENST00000354421 TRPA1O75762 1119 aa8.44□□□□□ -1.06
C11orf54-202ENST00000354421 RHOXF2BP0C7M4 288 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms