RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 SF3A3Q12874 501 aaKnown RBP eCLIP5.48□□□□□ -1.53
SKP1-202ENST00000353411 MED21Q13503 144 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 MCF2L2Q86YR7 1114 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 C2CD5Q86YS7 1000 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 BBOF1Q8ND07 529 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 TEKT1Q969V4 418 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 NAPBQ9H115 298 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 ATXN10Q9UBB4 475 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 SEPT3Q9UH03 358 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 KDM5BQ9UGL1 1544 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 YEATS2Q9ULM3 1422 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 BAZ2BQ9UIF8 2168 aaKnown RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 B4DLN1 442 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 SKAP2O75563 359 aaPredicted RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 STK10O94804 968 aaKnown RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 CCDC159P0C7I6 412 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 TUBA4AP68366 448 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 CCDC15Q0P6D6 951 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 TNIP1Q15025 636 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 SFMBT2Q5VUG0 894 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 DHX40Q8IX18 779 aaKnown RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 GRK7Q8WTQ7 553 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 WDR24Q96S15 920 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 DMAP1Q9NPF5 467 aaPredicted RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 BTBD7Q9P203 1132 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 TRAF3IP3Q9Y228 551 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 ARL2BPQ9Y2Y0 163 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 MX2P20592 715 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 ARID5AQ03989 594 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 MAP3K12Q12852 859 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 ASIC2Q16515 512 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 LONP2Q86WA8 852 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 DZIP3Q86Y13 1208 aaKnown RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 NELFBQ8WX92 580 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 USP28Q96RU2 1077 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 TAB2Q9NYJ8 693 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 SRRM3A6NNA2 597 aaPredicted RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 P4HA2O15460 535 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 ESRRAP11474 423 aaPredicted RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 S100A1P23297 94 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 ASIC1P78348 528 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 CWF19L1Q69YN2 538 aaKnown RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 TYW1BQ6NUM6 668 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 HEATR3Q7Z4Q2 680 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 CCDC105Q8IYK2 499 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 PARD3BQ8TEW8 1205 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 FAM81BQ96LP2 452 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 PITPNM3Q9BZ71 974 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 TAF1DQ9H5J8 278 aaPredicted RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 CEP126Q9P2H0 1117 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 GABBR1Q9UBS5 961 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 ASIC3Q9UHC3 531 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 WDR37Q9Y2I8 494 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 PTPRKQ15262 1439 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 PPIP5K1Q6PFW1 1433 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 MYH8P13535 1937 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 TTC21BQ7Z4L5 1316 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 GRID2IPA4D2P6 1211 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 F6X3S4 739 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 CCDC188H7C350 402 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 WDR46O15213 610 aaKnown RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 MCF2P10911 925 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 IGBP1P78318 339 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 CTAGE3PQ8IX95 158 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 TRIM55Q9BYV6 548 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 ZMYND12Q9H0C1 365 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 EPC1Q9H2F5 836 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 TMOD2Q9NZR1 351 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 PACSIN2Q9UNF0 486 aaPredicted RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 PGRMC1O00264 195 aaKnown RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 MFAP3LO75121 409 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 MAGOHP61326 146 aaKnown RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 IKQ13123 557 aaPredicted RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 NDUFA5Q16718 116 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 AGBL2Q5U5Z8 902 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 MYCBPAPQ8TBZ2 947 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 MAGOHBQ96A72 148 aaKnown RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 THAP12O43422 761 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 IFIT1P09914 478 aaKnown RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 EEF1GP26641 437 aaKnown RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 MAN1A1P33908 653 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 AARSP49588 968 aaKnown RBP eCLIP5.48□□□□□ -1.534e-6■■■■□ 24
SKP1-202ENST00000353411 NR1H3Q13133 447 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 MORC3Q14149 939 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 TTLL12Q14166 644 aaPredicted RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 ADRM1Q16186 407 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 C10orf76Q5T2E6 689 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 RSRC2Q7L4I2 434 aaKnown RBP5.48□□□□□ -1.53
SKP1-202ENST00000353411 HS6ST3Q8IZP7 471 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 WDR60Q8WVS4 1066 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 BHMTQ93088 406 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 EPSTI1Q96J88 318 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 EFHD1Q9BUP0 239 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 KCNG1Q9UIX4 513 aa5.48□□□□□ -1.53
SKP1-202ENST00000353411 PASKQ96RG2 1323 aa5.47□□□□□ -1.53
SKP1-202ENST00000353411 GOLGA8QA0A0J9YX86 632 aa5.47□□□□□ -1.53
SKP1-202ENST00000353411 GOLGA8OA6NCC3 632 aa5.47□□□□□ -1.53
SKP1-202ENST00000353411 GOLGA8NF8WBI6 632 aa5.47□□□□□ -1.53
SKP1-202ENST00000353411 KRT10P13645 584 aa5.47□□□□□ -1.53
SKP1-202ENST00000353411 CCNHP51946 323 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms