RNA–Protein interactions for RNA: ENST00000346691.9

ATRIP-202, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-202ENST00000346691 ZBTB7AO95365 584 aa20.94■□□□□ 0.94
ATRIP-202ENST00000346691 PRCPP42785 496 aa20.94■□□□□ 0.94
ATRIP-202ENST00000346691 KMT5BQ4FZB7 885 aa20.94■□□□□ 0.94
ATRIP-202ENST00000346691 ZNF658Q5TYW1 1059 aaPredicted RBP20.94■□□□□ 0.94
ATRIP-202ENST00000346691 CUL5Q93034 780 aa20.94■□□□□ 0.94
ATRIP-202ENST00000346691 SHTN1A0MZ66 631 aa20.93■□□□□ 0.94
ATRIP-202ENST00000346691 ECE1P42892 770 aa20.93■□□□□ 0.94
ATRIP-202ENST00000346691 RBM26Q5T8P6 1007 aaKnown RBP20.93■□□□□ 0.94
ATRIP-202ENST00000346691 CDKAL1Q5VV42 579 aa20.93■□□□□ 0.94
ATRIP-202ENST00000346691 E4F1Q66K89 784 aaPredicted RBP20.93■□□□□ 0.94
ATRIP-202ENST00000346691 IGSF22Q8N9C0 903 aa20.93■□□□□ 0.94
ATRIP-202ENST00000346691 GTPBP4Q9BZE4 634 aaKnown RBP20.93■□□□□ 0.94
ATRIP-202ENST00000346691 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.93■□□□□ 0.94
ATRIP-202ENST00000346691 PCDHA1Q9Y5I3 950 aa20.93■□□□□ 0.94
ATRIP-202ENST00000346691 TNNT1P13805 278 aa20.93■□□□□ 0.94
ATRIP-202ENST00000346691 DLGAP5Q15398 846 aa20.93■□□□□ 0.94
ATRIP-202ENST00000346691 PPP1R18Q6NYC8 613 aa20.93■□□□□ 0.94
ATRIP-202ENST00000346691 NELFBQ8WX92 580 aa20.93■□□□□ 0.94
ATRIP-202ENST00000346691 P2RX7Q99572 595 aaKnown RBP20.93■□□□□ 0.94
ATRIP-202ENST00000346691 NUDT12Q9BQG2 462 aa20.93■□□□□ 0.94
ATRIP-202ENST00000346691 VEZTQ9HBM0 779 aa20.93■□□□□ 0.94
ATRIP-202ENST00000346691 CNTNAP1P78357 1384 aa20.93■□□□□ 0.94
ATRIP-202ENST00000346691 TRIM49BA6NDI0 452 aa20.92■□□□□ 0.94
ATRIP-202ENST00000346691 NR1I3Q14994 352 aa20.92■□□□□ 0.94
ATRIP-202ENST00000346691 KIAA1755Q5JYT7 1200 aa20.92■□□□□ 0.94
ATRIP-202ENST00000346691 CCAR2Q8N163 923 aaKnown RBP20.92■□□□□ 0.94
ATRIP-202ENST00000346691 AK8Q96MA6 479 aa20.92■□□□□ 0.94
ATRIP-202ENST00000346691 UTRNP46939 3433 aa20.91■□□□□ 0.94
ATRIP-202ENST00000346691 PMS1P54277 932 aaKnown RBP20.91■□□□□ 0.94
ATRIP-202ENST00000346691 IKQ13123 557 aaPredicted RBP20.91■□□□□ 0.94
ATRIP-202ENST00000346691 TBX2Q13207 712 aaPredicted RBP20.91■□□□□ 0.94
ATRIP-202ENST00000346691 USH1GQ495M9 461 aa20.91■□□□□ 0.94
ATRIP-202ENST00000346691 ACER1Q8TDN7 264 aa20.91■□□□□ 0.94
ATRIP-202ENST00000346691 TMEM39BQ9GZU3 492 aa20.91■□□□□ 0.94
ATRIP-202ENST00000346691 A0A1B0GTH6 734 aa20.91■□□□□ 0.94
ATRIP-202ENST00000346691 ADKP55263 362 aaKnown RBP20.91■□□□□ 0.94
ATRIP-202ENST00000346691 PAK1Q13153 545 aa20.91■□□□□ 0.94
ATRIP-202ENST00000346691 GRB10Q13322 594 aa20.91■□□□□ 0.94
ATRIP-202ENST00000346691 ATF5Q9Y2D1 282 aaPredicted RBP20.91■□□□□ 0.94
ATRIP-202ENST00000346691 SMCHD1A6NHR9 2005 aa20.9■□□□□ 0.94
ATRIP-202ENST00000346691 MRPL12P52815 198 aaKnown RBP20.9■□□□□ 0.94
ATRIP-202ENST00000346691 HAS1Q92839 578 aa20.9■□□□□ 0.94
ATRIP-202ENST00000346691 PNMA5Q96PV4 448 aa20.9■□□□□ 0.94
ATRIP-202ENST00000346691 TMOD2Q9NZR1 351 aa20.9■□□□□ 0.94
ATRIP-202ENST00000346691 LRWD1Q9UFC0 647 aa20.9■□□□□ 0.94
ATRIP-202ENST00000346691 CCT6AP40227 531 aaKnown RBP20.89■□□□□ 0.94
ATRIP-202ENST00000346691 CT47A1Q5JQC4 288 aaPredicted RBP20.89■□□□□ 0.94
ATRIP-202ENST00000346691 MIGA2Q7L4E1 593 aa20.89■□□□□ 0.94
ATRIP-202ENST00000346691 GMCL1P1Q8NEA9 526 aa20.89■□□□□ 0.94
ATRIP-202ENST00000346691 HPS3Q969F9 1004 aa20.89■□□□□ 0.94
ATRIP-202ENST00000346691 RMND1Q9NWS8 449 aa20.89■□□□□ 0.94
ATRIP-202ENST00000346691 DDX25Q9UHL0 483 aaKnown RBP20.89■□□□□ 0.94
ATRIP-202ENST00000346691 RWDD2AQ9UIY3 292 aa20.89■□□□□ 0.94
ATRIP-202ENST00000346691 SPDYE4A6NLX3 237 aa20.89■□□□□ 0.93
ATRIP-202ENST00000346691 SPECC1LQ69YQ0 1117 aa20.89■□□□□ 0.93
ATRIP-202ENST00000346691 CREBRFQ8IUR6 639 aa20.89■□□□□ 0.93
ATRIP-202ENST00000346691 ZNF592Q92610 1267 aa20.89■□□□□ 0.93
ATRIP-202ENST00000346691 ADD3Q9UEY8 706 aaKnown RBP20.89■□□□□ 0.93
ATRIP-202ENST00000346691 TMEM139Q8IV31 216 aa20.88■□□□□ 0.93
ATRIP-202ENST00000346691 OGFOD1Q8N543 542 aa20.88■□□□□ 0.93
ATRIP-202ENST00000346691 TRIM9Q9C026 710 aa20.88■□□□□ 0.93
ATRIP-202ENST00000346691 BLOC1S4Q9NUP1 217 aa20.88■□□□□ 0.93
ATRIP-202ENST00000346691 FXR2P51116 673 aaKnown RBP eCLIP20.88■□□□□ 0.93
ATRIP-202ENST00000346691 ECM1Q16610 540 aa20.88■□□□□ 0.93
ATRIP-202ENST00000346691 SPDYE2Q495Y8 402 aa20.88■□□□□ 0.93
ATRIP-202ENST00000346691 NYAP1Q6ZVC0 841 aa20.88■□□□□ 0.93
ATRIP-202ENST00000346691 CCDC84Q86UT8 332 aaPredicted RBP20.88■□□□□ 0.93
ATRIP-202ENST00000346691 ADSSL1Q8N142 457 aa20.88■□□□□ 0.93
ATRIP-202ENST00000346691 TMX1Q9H3N1 280 aa20.88■□□□□ 0.93
ATRIP-202ENST00000346691 COL2A1P02458 1487 aaPredicted RBP20.88■□□□□ 0.93
ATRIP-202ENST00000346691 MEIS2O14770 477 aa20.87■□□□□ 0.93
ATRIP-202ENST00000346691 BMP3P12645 472 aa20.87■□□□□ 0.93
ATRIP-202ENST00000346691 CXCL9Q07325 125 aa20.87■□□□□ 0.93
ATRIP-202ENST00000346691 MCM6Q14566 821 aa20.87■□□□□ 0.93
ATRIP-202ENST00000346691 SYDE2Q5VT97 1194 aa20.87■□□□□ 0.93
ATRIP-202ENST00000346691 KCNK18Q7Z418 384 aa20.87■□□□□ 0.93
ATRIP-202ENST00000346691 NIM1KQ8IY84 436 aa20.87■□□□□ 0.93
ATRIP-202ENST00000346691 TC2NQ8N9U0 490 aa20.87■□□□□ 0.93
ATRIP-202ENST00000346691 FAM151AQ8WW52 585 aa20.87■□□□□ 0.93
ATRIP-202ENST00000346691 GMCL1Q96IK5 515 aa20.87■□□□□ 0.93
ATRIP-202ENST00000346691 HDAC9Q9UKV0 1011 aa20.87■□□□□ 0.93
ATRIP-202ENST00000346691 ZNRF3Q9ULT6 936 aa20.87■□□□□ 0.93
ATRIP-202ENST00000346691 KIF13BQ9NQT8 1826 aa20.87■□□□□ 0.93
ATRIP-202ENST00000346691 FCER1AP12319 257 aa20.87■□□□□ 0.93
ATRIP-202ENST00000346691 ORC2Q13416 577 aaPredicted RBP20.87■□□□□ 0.93
ATRIP-202ENST00000346691 KRT31Q15323 416 aa20.87■□□□□ 0.93
ATRIP-202ENST00000346691 NBPF9Q3BBW0 867 aa20.87■□□□□ 0.93
ATRIP-202ENST00000346691 CEP135Q66GS9 1140 aa20.87■□□□□ 0.93
ATRIP-202ENST00000346691 EEF2KMTQ96G04 330 aa20.87■□□□□ 0.93
ATRIP-202ENST00000346691 PPP1R13BQ96KQ4 1090 aa20.87■□□□□ 0.93
ATRIP-202ENST00000346691 RHOBTB3O94955 611 aa20.86■□□□□ 0.93
ATRIP-202ENST00000346691 ASIC1P78348 528 aa20.86■□□□□ 0.93
ATRIP-202ENST00000346691 ZYXQ15942 572 aaKnown RBP20.86■□□□□ 0.93
ATRIP-202ENST00000346691 PPP4R3AQ6IN85 833 aa20.86■□□□□ 0.93
ATRIP-202ENST00000346691 ANO3Q9BYT9 981 aa20.86■□□□□ 0.93
ATRIP-202ENST00000346691 TAB2Q9NYJ8 693 aa20.86■□□□□ 0.93
ATRIP-202ENST00000346691 PPP1R1BQ9UD71 204 aaPredicted RBP20.86■□□□□ 0.93
ATRIP-202ENST00000346691 KCNB1Q14721 858 aa20.86■□□□□ 0.93
ATRIP-202ENST00000346691 CALML4Q96GE6 196 aa20.86■□□□□ 0.93
ATRIP-202ENST00000346691 VPS16Q9H269 839 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms