RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 SBNO1A3KN83 1393 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 KCNJ18B7U540 433 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 POLR2FP61218 127 aaKnown RBP17.82■□□□□ 0.44
PTCH1-201ENST00000331920 KCNJ12Q14500 433 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 TGFBRAP1Q8WUH2 860 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.82■□□□□ 0.44
PTCH1-201ENST00000331920 HADHAP40939 763 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 PTK2BQ14289 1009 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 CATSPER3Q86XQ3 398 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 LARGE2Q8N3Y3 721 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 CCDC24Q8N4L8 307 aa17.82■□□□□ 0.44
PTCH1-201ENST00000331920 PASKQ96RG2 1323 aa17.81■□□□□ 0.44
PTCH1-201ENST00000331920 CMTR1Q8N1G2 835 aaKnown RBP17.81■□□□□ 0.44
PTCH1-201ENST00000331920 CCDC197Q8NCU1 140 aa17.81■□□□□ 0.44
PTCH1-201ENST00000331920 DDAH1O94760 285 aa17.81■□□□□ 0.44
PTCH1-201ENST00000331920 TRAPPC3LQ5T215 181 aa17.81■□□□□ 0.44
PTCH1-201ENST00000331920 KIAA1841Q6NSI8 718 aa17.81■□□□□ 0.44
PTCH1-201ENST00000331920 SMYD3Q9H7B4 428 aa17.81■□□□□ 0.44
PTCH1-201ENST00000331920 CNBD1Q8NA66 436 aa17.81■□□□□ 0.44
PTCH1-201ENST00000331920 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.81■□□□□ 0.44
PTCH1-201ENST00000331920 ENOX1Q8TC92 643 aaKnown RBP17.81■□□□□ 0.44
PTCH1-201ENST00000331920 TSC1Q92574 1164 aa17.81■□□□□ 0.44
PTCH1-201ENST00000331920 ANP32DO95626 131 aa17.81■□□□□ 0.44
PTCH1-201ENST00000331920 PCGF5Q86SE9 256 aa17.81■□□□□ 0.44
PTCH1-201ENST00000331920 PACSIN2Q9UNF0 486 aaPredicted RBP17.81■□□□□ 0.44
PTCH1-201ENST00000331920 ORC4O43929 436 aa17.81■□□□□ 0.44
PTCH1-201ENST00000331920 MSH2P43246 934 aa17.81■□□□□ 0.44
PTCH1-201ENST00000331920 NCAPG2Q86XI2 1143 aa17.81■□□□□ 0.44
PTCH1-201ENST00000331920 DDX42Q86XP3 938 aaKnown RBP eCLIP17.81■□□□□ 0.44
PTCH1-201ENST00000331920 MLKLQ8NB16 471 aa17.81■□□□□ 0.44
PTCH1-201ENST00000331920 SLC5A4Q9NY91 659 aa17.81■□□□□ 0.44
PTCH1-201ENST00000331920 ZNF263O14978 683 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 TCP11X2Q5H9J9 407 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 KIAA2013Q8IYS2 634 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 TEKT4Q8WW24 435 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 NAF1Q96HR8 494 aaKnown RBP17.8■□□□□ 0.44
PTCH1-201ENST00000331920 SKIP12755 728 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 NEK2P51955 445 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 MRPL28Q13084 256 aaKnown RBP17.8■□□□□ 0.44
PTCH1-201ENST00000331920 EPAS1Q99814 870 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 COBLO75128 1261 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 MORC3Q14149 939 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 KSR2Q6VAB6 950 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 MAP7D3Q8IWC1 876 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 TTLL11Q8NHH1 800 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 RTEL1Q9NZ71 1219 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 LRFN2Q9ULH4 789 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 POLIQ9UNA4 740 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 HIBADHP31937 336 aaKnown RBP17.8■□□□□ 0.44
PTCH1-201ENST00000331920 OCA2Q04671 838 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 KCTD6Q8NC69 237 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 TRIM15Q9C019 465 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 TRPV6Q9H1D0 765 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 DNAJC6O75061 913 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 ZNF280CQ8ND82 737 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 IFNA8P32881 189 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 CCDC84Q86UT8 332 aaPredicted RBP17.8■□□□□ 0.44
PTCH1-201ENST00000331920 NUDCD1Q96RS6 583 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 GGA1Q9UJY5 639 aa17.8■□□□□ 0.44
PTCH1-201ENST00000331920 BRD2P25440 801 aaKnown RBP17.79■□□□□ 0.44
PTCH1-201ENST00000331920 FAM47AQ5JRC9 791 aa17.79■□□□□ 0.44
PTCH1-201ENST00000331920 FAM173BQ6P4H8 233 aa17.79■□□□□ 0.44
PTCH1-201ENST00000331920 USP6NLQ92738 828 aa17.79■□□□□ 0.44
PTCH1-201ENST00000331920 TEX9Q8N6V9 391 aa17.79■□□□□ 0.44
PTCH1-201ENST00000331920 TTC25Q96NG3 672 aa17.79■□□□□ 0.44
PTCH1-201ENST00000331920 SYNJ2O15056 1496 aa17.79■□□□□ 0.44
PTCH1-201ENST00000331920 TAF5LO75529 589 aa17.79■□□□□ 0.44
PTCH1-201ENST00000331920 VCAM1P19320 739 aa17.79■□□□□ 0.44
PTCH1-201ENST00000331920 BASP1P80723 227 aaKnown RBP17.79■□□□□ 0.44
PTCH1-201ENST00000331920 GIPC2Q8TF65 315 aa17.79■□□□□ 0.44
PTCH1-201ENST00000331920 JPH2Q9BR39 696 aaPredicted RBP17.79■□□□□ 0.44
PTCH1-201ENST00000331920 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.79■□□□□ 0.443e-7■■■■■ 56.2
PTCH1-201ENST00000331920 ANGEL1Q9UNK9 670 aaKnown RBP17.79■□□□□ 0.44
PTCH1-201ENST00000331920 FANCD2Q9BXW9 1451 aa17.79■□□□□ 0.44
PTCH1-201ENST00000331920 FAM149B1Q96BN6 582 aa17.79■□□□□ 0.44
PTCH1-201ENST00000331920 THOC1Q96FV9 657 aaKnown RBP17.79■□□□□ 0.44
PTCH1-201ENST00000331920 ZFXP17010 805 aaPredicted RBP17.79■□□□□ 0.44
PTCH1-201ENST00000331920 ATL3Q6DD88 541 aa17.79■□□□□ 0.44
PTCH1-201ENST00000331920 MAPKAPK5Q8IW41 473 aa17.79■□□□□ 0.44
PTCH1-201ENST00000331920 EEF2KMTQ96G04 330 aa17.79■□□□□ 0.44
PTCH1-201ENST00000331920 CSADQ9Y600 493 aa17.79■□□□□ 0.44
PTCH1-201ENST00000331920 ZMYND10O75800 440 aa17.79■□□□□ 0.44
PTCH1-201ENST00000331920 GABPB1Q06547 395 aaPredicted RBP17.79■□□□□ 0.44
PTCH1-201ENST00000331920 CC2D2BQ6DHV5 1058 aa17.79■□□□□ 0.44
PTCH1-201ENST00000331920 GLT8D2Q9H1C3 349 aa17.79■□□□□ 0.44
PTCH1-201ENST00000331920 DDX28Q9NUL7 540 aaKnown RBP17.79■□□□□ 0.44
PTCH1-201ENST00000331920 SLC12A6Q9UHW9 1150 aa17.79■□□□□ 0.44
PTCH1-201ENST00000331920 HYOU1Q9Y4L1 999 aa17.79■□□□□ 0.44
PTCH1-201ENST00000331920 ANGPT1Q15389 498 aa17.79■□□□□ 0.44
PTCH1-201ENST00000331920 WDR7Q9Y4E6 1490 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 SLCO1A2P46721 670 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 ATP8B2P98198 1209 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 ARMCX5Q6P1M9 558 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 KLC3Q6P597 504 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 DARS2Q6PI48 645 aaKnown RBP17.78■□□□□ 0.44
PTCH1-201ENST00000331920 TMCO5AQ8N6Q1 288 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 C7orf31Q8N865 590 aa17.78■□□□□ 0.44
PTCH1-201ENST00000331920 GEMIN8Q9NWZ8 242 aaKnown RBP17.78■□□□□ 0.44
PTCH1-201ENST00000331920 PSMC1P62191 440 aaKnown RBP17.78■□□□□ 0.44
PTCH1-201ENST00000331920 RASSF7Q02833 373 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms