RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 EHD2Q9NZN4 543 aa19.4■□□□□ 0.7
PTP4A3-201ENST00000329397 BIN2Q9UBW5 565 aaPredicted RBP19.4■□□□□ 0.7
PTP4A3-201ENST00000329397 ACTN2P35609 894 aa19.39■□□□□ 0.7
PTP4A3-201ENST00000329397 DGKHQ86XP1 1220 aa19.39■□□□□ 0.7
PTP4A3-201ENST00000329397 POTEDQ86YR6 584 aa19.39■□□□□ 0.7
PTP4A3-201ENST00000329397 ZNF444Q8N0Y2 327 aaPredicted RBP19.39■□□□□ 0.7
PTP4A3-201ENST00000329397 CCSER1Q9C0I3 900 aa19.39■□□□□ 0.7
PTP4A3-201ENST00000329397 UBA5Q9GZZ9 404 aa19.39■□□□□ 0.7
PTP4A3-201ENST00000329397 MLXIPQ9HAP2 919 aa19.39■□□□□ 0.7
PTP4A3-201ENST00000329397 MKRN1Q9UHC7 482 aaKnown RBP19.39■□□□□ 0.7
PTP4A3-201ENST00000329397 CXCR5P32302 372 aa19.39■□□□□ 0.69
PTP4A3-201ENST00000329397 MATR3P43243 847 aaKnown RBP eCLIP19.39■□□□□ 0.69
PTP4A3-201ENST00000329397 MUM1L1Q5H9M0 696 aa19.39■□□□□ 0.69
PTP4A3-201ENST00000329397 CLEC4GQ6UXB4 293 aa19.39■□□□□ 0.69
PTP4A3-201ENST00000329397 ANKRD13CQ8N6S4 541 aa19.39■□□□□ 0.69
PTP4A3-201ENST00000329397 TCP11L1Q9NUJ3 509 aa19.39■□□□□ 0.69
PTP4A3-201ENST00000329397 ANKIB1Q9P2G1 1089 aa19.39■□□□□ 0.69
PTP4A3-201ENST00000329397 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.39■□□□□ 0.69
PTP4A3-201ENST00000329397 CAPN6Q9Y6Q1 641 aa19.39■□□□□ 0.69
PTP4A3-201ENST00000329397 CCDC88AQ3V6T2 1871 aa19.39■□□□□ 0.69
PTP4A3-201ENST00000329397 KRT86O43790 486 aa19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 RNF40O75150 1001 aa19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 LDHBP07195 334 aaKnown RBP19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 OR52Z1P0C646 297 aa19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 TXKP42681 527 aa19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 GRIPAP1Q4V328 841 aa19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 GLIS3Q8NEA6 775 aa19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 COL22A1Q8NFW1 1626 aaPredicted RBP19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 SMCO2A6NFE2 343 aa19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 NFIXQ14938 502 aa19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 MEA1Q16626 185 aa19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 CCDC96Q2M329 555 aa19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 CCDC155Q8N6L0 562 aa19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 GOLGA5Q8TBA6 731 aa19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 HDAC7Q8WUI4 952 aa19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 GJA10Q969M2 543 aa19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 SEMA6BQ9H3T3 888 aa19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 SH3GLB2Q9NR46 395 aa19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 ZNHIT6Q9NWK9 470 aaKnown RBP19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 FEZ2Q9UHY8 353 aaPredicted RBP19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 IPO7O95373 1038 aaKnown RBP19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 CCNE1P24864 410 aa19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 WDR93Q6P2C0 686 aa19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 C2CD5Q86YS7 1000 aa19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 SETDB2Q96T68 719 aa19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 MMTAG2Q9BU76 263 aaKnown RBP19.38■□□□□ 0.69
PTP4A3-201ENST00000329397 SYF2O95926 243 aaKnown RBP19.37■□□□□ 0.69
PTP4A3-201ENST00000329397 CYLC1P35663 651 aaPredicted RBP19.37■□□□□ 0.69
PTP4A3-201ENST00000329397 PAPD7Q5XG87 772 aaKnown RBP19.37■□□□□ 0.69
PTP4A3-201ENST00000329397 LEKR1Q6ZMV7 388 aa19.37■□□□□ 0.69
PTP4A3-201ENST00000329397 TBCKQ8TEA7 893 aa19.37■□□□□ 0.69
PTP4A3-201ENST00000329397 GBP3Q9H0R5 595 aa19.37■□□□□ 0.69
PTP4A3-201ENST00000329397 RASA1P20936 1047 aa19.37■□□□□ 0.69
PTP4A3-201ENST00000329397 KRT83P78385 493 aa19.37■□□□□ 0.69
PTP4A3-201ENST00000329397 COG1Q8WTW3 980 aa19.37■□□□□ 0.69
PTP4A3-201ENST00000329397 PIGSQ96S52 555 aa19.37■□□□□ 0.69
PTP4A3-201ENST00000329397 PALM3A6NDB9 673 aaPredicted RBP19.36■□□□□ 0.69
PTP4A3-201ENST00000329397 MOCS3O95396 460 aa19.36■□□□□ 0.69
PTP4A3-201ENST00000329397 LRRC41Q15345 812 aa19.36■□□□□ 0.69
PTP4A3-201ENST00000329397 FAM182BQ5T319 152 aa19.36■□□□□ 0.69
PTP4A3-201ENST00000329397 CLEC10AQ8IUN9 316 aa19.36■□□□□ 0.69
PTP4A3-201ENST00000329397 DHTKD1Q96HY7 919 aaPredicted RBP19.36■□□□□ 0.69
PTP4A3-201ENST00000329397 PSD3Q9NYI0 1048 aa19.36■□□□□ 0.69
PTP4A3-201ENST00000329397 FRMPD2Q68DX3 1309 aaPredicted RBP19.36■□□□□ 0.69
PTP4A3-201ENST00000329397 DNA2P51530 1060 aa19.36■□□□□ 0.69
PTP4A3-201ENST00000329397 ZBED6P86452 979 aa19.36■□□□□ 0.69
PTP4A3-201ENST00000329397 FAM71BQ8TC56 605 aa19.36■□□□□ 0.69
PTP4A3-201ENST00000329397 CCDC42Q96M95 316 aa19.36■□□□□ 0.69
PTP4A3-201ENST00000329397 MMRN2Q9H8L6 949 aa19.36■□□□□ 0.69
PTP4A3-201ENST00000329397 HPCAL4Q9UM19 191 aa19.36■□□□□ 0.69
PTP4A3-201ENST00000329397 WNK3Q9BYP7 1800 aa19.36■□□□□ 0.69
PTP4A3-201ENST00000329397 POTEMA6NI47 508 aa19.35■□□□□ 0.69
PTP4A3-201ENST00000329397 MYO1CO00159 1063 aa19.35■□□□□ 0.69
PTP4A3-201ENST00000329397 EIF6P56537 245 aaKnown RBP19.35■□□□□ 0.69
PTP4A3-201ENST00000329397 SLC7A5Q01650 507 aa19.35■□□□□ 0.69
PTP4A3-201ENST00000329397 RABEP2Q9H5N1 569 aa19.35■□□□□ 0.69
PTP4A3-201ENST00000329397 ARHGAP20Q9P2F6 1191 aa19.35■□□□□ 0.69
PTP4A3-201ENST00000329397 NCK2O43639 380 aa19.35■□□□□ 0.69
PTP4A3-201ENST00000329397 KIF5AQ12840 1032 aa19.35■□□□□ 0.69
PTP4A3-201ENST00000329397 NONOQ15233 471 aaKnown RBP eCLIP19.35■□□□□ 0.694e-7■■■■□ 19.9
PTP4A3-201ENST00000329397 TRIM34Q9BYJ4 488 aa19.35■□□□□ 0.69
PTP4A3-201ENST00000329397 GGCXP38435 758 aa19.34■□□□□ 0.69
PTP4A3-201ENST00000329397 NUDT12Q9BQG2 462 aa19.34■□□□□ 0.69
PTP4A3-201ENST00000329397 KANSL2Q9H9L4 492 aa19.34■□□□□ 0.69
PTP4A3-201ENST00000329397 MYMKA6NI61 221 aa19.34■□□□□ 0.69
PTP4A3-201ENST00000329397 EIF3CLB5ME19 914 aaKnown RBP19.34■□□□□ 0.69
PTP4A3-201ENST00000329397 GNPATO15228 680 aa19.34■□□□□ 0.69
PTP4A3-201ENST00000329397 NFRKBQ6P4R8 1299 aa19.34■□□□□ 0.69
PTP4A3-201ENST00000329397 TMC4Q7Z404 712 aa19.34■□□□□ 0.69
PTP4A3-201ENST00000329397 COA7Q96BR5 231 aa19.34■□□□□ 0.69
PTP4A3-201ENST00000329397 EYA3Q99504 573 aa19.34■□□□□ 0.69
PTP4A3-201ENST00000329397 EIF3CQ99613 913 aaKnown RBP19.34■□□□□ 0.69
PTP4A3-201ENST00000329397 SELENOOQ9BVL4 669 aa19.34■□□□□ 0.69
PTP4A3-201ENST00000329397 ZMYND12Q9H0C1 365 aa19.34■□□□□ 0.69
PTP4A3-201ENST00000329397 ROBO1Q9Y6N7 1651 aa19.34■□□□□ 0.69
PTP4A3-201ENST00000329397 ZPR1O75312 459 aa19.33■□□□□ 0.69
PTP4A3-201ENST00000329397 TDP2O95551 362 aa19.33■□□□□ 0.69
PTP4A3-201ENST00000329397 GNAQP50148 359 aa19.33■□□□□ 0.69
PTP4A3-201ENST00000329397 NEK8Q86SG6 692 aa19.33■□□□□ 0.69
PTP4A3-201ENST00000329397 RRP36Q96EU6 259 aaKnown RBP19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms