RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 TMOD1P28289 359 aa18.59■□□□□ 0.57
LMNB2-201ENST00000325327 LDHDQ86WU2 507 aa18.59■□□□□ 0.57
LMNB2-201ENST00000325327 CD19P15391 556 aa18.59■□□□□ 0.57
LMNB2-201ENST00000325327 CYLC1P35663 651 aaPredicted RBP18.59■□□□□ 0.57
LMNB2-201ENST00000325327 LIG4P49917 911 aa18.59■□□□□ 0.57
LMNB2-201ENST00000325327 SRBD1Q8N5C6 995 aaKnown RBP18.59■□□□□ 0.57
LMNB2-201ENST00000325327 KIF18AQ8NI77 898 aa18.59■□□□□ 0.57
LMNB2-201ENST00000325327 ZNF668Q96K58 619 aaPredicted RBP18.59■□□□□ 0.57
LMNB2-201ENST00000325327 CRACR2AQ9BSW2 395 aa18.59■□□□□ 0.57
LMNB2-201ENST00000325327 CBX8Q9HC52 389 aa18.59■□□□□ 0.57
LMNB2-201ENST00000325327 PANK4Q9NVE7 773 aa18.59■□□□□ 0.57
LMNB2-201ENST00000325327 DLATP10515 647 aaKnown RBP18.59■□□□□ 0.57
LMNB2-201ENST00000325327 CCND2P30279 289 aa18.59■□□□□ 0.57
LMNB2-201ENST00000325327 FAM26FQ5R3K3 315 aa18.59■□□□□ 0.57
LMNB2-201ENST00000325327 TMED8Q6PL24 325 aaPredicted RBP18.59■□□□□ 0.57
LMNB2-201ENST00000325327 ZNF354CQ86Y25 554 aa18.59■□□□□ 0.57
LMNB2-201ENST00000325327 ACER1Q8TDN7 264 aa18.59■□□□□ 0.57
LMNB2-201ENST00000325327 PAFAH1B1P43034 410 aa18.59■□□□□ 0.57
LMNB2-201ENST00000325327 EP400NLQ6ZTU2 488 aa18.59■□□□□ 0.57
LMNB2-201ENST00000325327 ZBTB8OSQ8IWT0 167 aa18.59■□□□□ 0.57
LMNB2-201ENST00000325327 DDTLA6NHG4 134 aaPredicted RBP18.58■□□□□ 0.57
LMNB2-201ENST00000325327 NEFHP12036 1026 aa18.58■□□□□ 0.57
LMNB2-201ENST00000325327 PFKFB3Q16875 520 aaPredicted RBP18.58■□□□□ 0.57
LMNB2-201ENST00000325327 KRBA2Q6ZNG9 492 aa18.58■□□□□ 0.57
LMNB2-201ENST00000325327 SESTD1Q86VW0 696 aa18.58■□□□□ 0.57
LMNB2-201ENST00000325327 PIGOQ8TEQ8 1089 aa18.58■□□□□ 0.57
LMNB2-201ENST00000325327 UBXN4Q92575 508 aa18.58■□□□□ 0.57
LMNB2-201ENST00000325327 NLRC4Q9NPP4 1024 aa18.58■□□□□ 0.57
LMNB2-201ENST00000325327 SPDYE2BA6NHP3 402 aa18.58■□□□□ 0.57
LMNB2-201ENST00000325327 POTEMA6NI47 508 aa18.58■□□□□ 0.57
LMNB2-201ENST00000325327 TNPO2O14787 897 aaKnown RBP18.58■□□□□ 0.57
LMNB2-201ENST00000325327 CALUO43852 315 aaPredicted RBP18.58■□□□□ 0.57
LMNB2-201ENST00000325327 SPDYE6P0CI01 402 aa18.58■□□□□ 0.57
LMNB2-201ENST00000325327 PNMA8AQ86V59 439 aaPredicted RBP18.58■□□□□ 0.57
LMNB2-201ENST00000325327 CD2APQ9Y5K6 639 aa18.58■□□□□ 0.57
LMNB2-201ENST00000325327 ABCB11O95342 1321 aa18.58■□□□□ 0.56
LMNB2-201ENST00000325327 ERLIN2O94905 339 aa18.58■□□□□ 0.56
LMNB2-201ENST00000325327 VEGFAP15692 232 aaPredicted RBP18.58■□□□□ 0.56
LMNB2-201ENST00000325327 COG2Q14746 738 aa18.58■□□□□ 0.56
LMNB2-201ENST00000325327 MYOCDQ8IZQ8 938 aa18.58■□□□□ 0.56
LMNB2-201ENST00000325327 LINC00301Q8NCQ3 95 aa18.58■□□□□ 0.56
LMNB2-201ENST00000325327 BAZ2BQ9UIF8 2168 aaKnown RBP18.58■□□□□ 0.56
LMNB2-201ENST00000325327 FAM160B1Q5W0V3 765 aa18.58■□□□□ 0.56
LMNB2-201ENST00000325327 IGSF22Q8N9C0 903 aa18.58■□□□□ 0.56
LMNB2-201ENST00000325327 WDR11Q9BZH6 1224 aa18.58■□□□□ 0.56
LMNB2-201ENST00000325327 RRAGCQ9HB90 399 aa18.58■□□□□ 0.56
LMNB2-201ENST00000325327 FAM207AQ9NSI2 230 aaPredicted RBP18.58■□□□□ 0.56
LMNB2-201ENST00000325327 CASQ1P31415 396 aa18.57■□□□□ 0.56
LMNB2-201ENST00000325327 LONP1P36776 959 aaKnown RBP18.57■□□□□ 0.56
LMNB2-201ENST00000325327 ECE1P42892 770 aa18.57■□□□□ 0.56
LMNB2-201ENST00000325327 ARHGAP44Q17R89 818 aa18.57■□□□□ 0.56
LMNB2-201ENST00000325327 TEX35Q5T0J7 233 aa18.57■□□□□ 0.56
LMNB2-201ENST00000325327 CDAN1Q8IWY9 1227 aa18.57■□□□□ 0.56
LMNB2-201ENST00000325327 LZTFL1Q9NQ48 299 aa18.57■□□□□ 0.56
LMNB2-201ENST00000325327 PXDNLA1KZ92 1463 aa18.57■□□□□ 0.56
LMNB2-201ENST00000325327 TRAPPC10P48553 1259 aa18.57■□□□□ 0.56
LMNB2-201ENST00000325327 GRM4Q14833 912 aa18.57■□□□□ 0.56
LMNB2-201ENST00000325327 APBB1IPQ7Z5R6 666 aaPredicted RBP18.57■□□□□ 0.56
LMNB2-201ENST00000325327 LARP4BQ92615 738 aaKnown RBP18.57■□□□□ 0.56
LMNB2-201ENST00000325327 SFI1A8K8P3 1242 aa18.57■□□□□ 0.56
LMNB2-201ENST00000325327 MCM6Q14566 821 aa18.57■□□□□ 0.56
LMNB2-201ENST00000325327 STK24Q9Y6E0 443 aa18.57■□□□□ 0.56
LMNB2-201ENST00000325327 CCL15-CCL14A0A0B4J2E2 113 aa18.56■□□□□ 0.56
LMNB2-201ENST00000325327 GCFC2P16383 781 aaKnown RBP18.56■□□□□ 0.56
LMNB2-201ENST00000325327 TM4SF1P30408 202 aa18.56■□□□□ 0.56
LMNB2-201ENST00000325327 ARHGAP4P98171 946 aa18.56■□□□□ 0.56
LMNB2-201ENST00000325327 FANCCQ00597 558 aa18.56■□□□□ 0.56
LMNB2-201ENST00000325327 CCL15Q16663 113 aa18.56■□□□□ 0.56
LMNB2-201ENST00000325327 ALS2CR12Q96Q35 445 aa18.56■□□□□ 0.56
LMNB2-201ENST00000325327 BHMT2Q9H2M3 363 aa18.56■□□□□ 0.56
LMNB2-201ENST00000325327 COL4A3BPQ9Y5P4 624 aa18.56■□□□□ 0.56
LMNB2-201ENST00000325327 NLRP12P59046 1061 aa18.56■□□□□ 0.56
LMNB2-201ENST00000325327 NFX1Q12986 1120 aaKnown RBP18.56■□□□□ 0.56
LMNB2-201ENST00000325327 MTMR1Q13613 665 aa18.56■□□□□ 0.56
LMNB2-201ENST00000325327 AXDND1Q5T1B0 1012 aaPredicted RBP18.56■□□□□ 0.56
LMNB2-201ENST00000325327 PLCD3Q8N3E9 789 aa18.56■□□□□ 0.56
LMNB2-201ENST00000325327 CDHR1Q96JP9 859 aa18.56■□□□□ 0.56
LMNB2-201ENST00000325327 SH2D3AQ9BRG2 576 aa18.56■□□□□ 0.56
LMNB2-201ENST00000325327 MED1Q15648 1581 aaPredicted RBP18.56■□□□□ 0.56
LMNB2-201ENST00000325327 KIF1AQ12756 1690 aa18.56■□□□□ 0.56
LMNB2-201ENST00000325327 HNRNPDLO14979 420 aaKnown RBP18.56■□□□□ 0.56
LMNB2-201ENST00000325327 GLIS2Q9BZE0 524 aaPredicted RBP18.56■□□□□ 0.56
LMNB2-201ENST00000325327 ADARB2Q9NS39 739 aaKnown RBP18.56■□□□□ 0.56
LMNB2-201ENST00000325327 HOXA10P31260 410 aaPredicted RBP18.55■□□□□ 0.56
LMNB2-201ENST00000325327 KRT9P35527 623 aa18.55■□□□□ 0.56
LMNB2-201ENST00000325327 RBM10P98175 930 aaKnown RBP18.55■□□□□ 0.56
LMNB2-201ENST00000325327 SBK1Q52WX2 424 aa18.55■□□□□ 0.56
LMNB2-201ENST00000325327 FASTKD5Q7L8L6 764 aaKnown RBP18.55■□□□□ 0.56
LMNB2-201ENST00000325327 CEP83Q9Y592 693 aa18.55■□□□□ 0.56
LMNB2-201ENST00000325327 SRGAP2CP0DJJ0 459 aa18.55■□□□□ 0.56
LMNB2-201ENST00000325327 DMP1Q13316 513 aaPredicted RBP18.55■□□□□ 0.56
LMNB2-201ENST00000325327 SNW1Q13573 536 aaKnown RBP18.55■□□□□ 0.56
LMNB2-201ENST00000325327 STXBP2Q15833 593 aa18.55■□□□□ 0.56
LMNB2-201ENST00000325327 TICAM2Q86XR7 235 aa18.55■□□□□ 0.56
LMNB2-201ENST00000325327 NSUN6Q8TEA1 469 aaKnown RBP18.55■□□□□ 0.56
LMNB2-201ENST00000325327 FBXO40Q9UH90 709 aa18.55■□□□□ 0.56
LMNB2-201ENST00000325327 GUCA1BQ9UMX6 200 aa18.55■□□□□ 0.56
LMNB2-201ENST00000325327 ZNF543Q08ER8 600 aa18.55■□□□□ 0.56
LMNB2-201ENST00000325327 GRIK5Q16478 980 aa18.55■□□□□ 0.56
LMNB2-201ENST00000325327 C16orf86Q6ZW13 317 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms