RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 GOLGA8FQ08AF8 430 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 GOLGA8DPQ0D2H9 430 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 KCNJ12Q14500 433 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 SPATA1Q5VX52 437 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 ARL6IP4Q66PJ3 421 aaKnown RBP10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 POTEDQ86YR6 584 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 ZNF526Q8TF50 670 aaPredicted RBP10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 AK8Q96MA6 479 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 SAMSN1Q9NSI8 373 aaKnown RBP10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 HERC5Q9UII4 1024 aaKnown RBP10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 IVNS1ABPQ9Y6Y0 642 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 DDTLA6NHG4 134 aaPredicted RBP10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 PRR29P0C7W0 189 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 SLURP2P0DP57 97 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 GCFC2P16383 781 aaKnown RBP10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 MKRN3Q13064 507 aaKnown RBP10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 FAM26FQ5R3K3 315 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 SPECC1LQ69YQ0 1117 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 NBPF11Q86T75 865 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 SPZ1Q9BXG8 430 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 SPON1Q9HCB6 807 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 FAM207AQ9NSI2 230 aaPredicted RBP10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 PANK4Q9NVE7 773 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 PUF60Q9UHX1 559 aaKnown RBP10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 PCDHB13Q9Y5F0 798 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 GRIN1Q05586 938 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 NTRK3Q16288 839 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 MCTP2Q6DN12 878 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 MYOCDQ8IZQ8 938 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 ZNF577Q9BSK1 485 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 POLD4Q9HCU8 107 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 JADE2Q9NQC1 790 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 DISC1Q9NRI5 854 aa10.35□□□□□ -0.75
TMEM39A-201ENST00000319172 NOP56O00567 594 aaKnown RBP10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 IGSF3O75054 1194 aa10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 TNNT3P45378 269 aaPredicted RBP10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 GMPSP49915 693 aaPredicted RBP10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 CUL4BQ13620 913 aa10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 RUFY1Q96T51 708 aa10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 RAVER2Q9HCJ3 691 aaKnown RBP10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 DDX4Q9NQI0 724 aaKnown RBP10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 PCDHA6Q9UN73 950 aa10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 GDAQ9Y2T3 454 aa10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 PCDHA8Q9Y5H6 950 aa10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 FAM170AA1A519 330 aa10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 ENTPD3O75355 529 aa10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 USP14P54578 494 aa10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 SKIDA1Q1XH10 827 aa10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 MRFAP1L1Q96HT8 127 aa10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 TEKT3Q9BXF9 490 aa10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 GINS2Q9Y248 185 aa10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 TMCO5BA8MYB1 307 aa10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 PHACTR2O75167 634 aa10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 EPB41P11171 864 aaKnown RBP10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 HSP90B2PQ58FF3 399 aa10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 FAM160B2Q86V87 743 aa10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 ZDHHC15Q96MV8 337 aa10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 FBXO2Q9UK22 296 aaPredicted RBP10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 FRMD4BQ9Y2L6 1034 aa10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 PHRF1Q9P1Y6 1649 aaKnown RBP10.34□□□□□ -0.75
TMEM39A-201ENST00000319172 CRY2Q49AN0 593 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 PCDHAC2Q9Y5I4 1007 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 FAM205AQ6ZU69 1335 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 EVCP57679 992 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 ARHGAP4P98171 946 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 CXCL9Q07325 125 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 EEPD1Q7L9B9 569 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 CERS5Q8N5B7 392 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 FAM151AQ8WW52 585 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 CRACR2AQ9BSW2 395 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 NLRC4Q9NPP4 1024 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 IL17RBQ9NRM6 502 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 MAD2L2Q9UI95 211 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 RABGAP1Q9Y3P9 1069 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 SALL1Q9NSC2 1324 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 EXOC3O60645 756 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 XKR9Q5GH70 373 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 ZFPM1Q8IX07 1006 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 PDCL2Q8N4E4 241 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 ZNF579Q8NAF0 562 aaKnown RBP10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 FAM217BQ9NTX9 383 aaPredicted RBP10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 IMPACTQ9P2X3 320 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 PYCARDQ9ULZ3 195 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 SMTNP53814 917 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 ATP2C1P98194 919 aaPredicted RBP10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 ZNF569Q5MCW4 686 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 MYOZ2Q9NPC6 264 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 PAXBP1Q9Y5B6 917 aa10.33□□□□□ -0.76
TMEM39A-201ENST00000319172 ALS2Q96Q42 1657 aa10.32□□□□□ -0.76
TMEM39A-201ENST00000319172 PDS5AQ29RF7 1337 aaKnown RBP10.32□□□□□ -0.76
TMEM39A-201ENST00000319172 STXBP3O00186 592 aa10.32□□□□□ -0.76
TMEM39A-201ENST00000319172 ERCC5P28715 1186 aaPredicted RBP10.32□□□□□ -0.76
TMEM39A-201ENST00000319172 KIF5AQ12840 1032 aa10.32□□□□□ -0.76
TMEM39A-201ENST00000319172 GNPTABQ3T906 1256 aa10.32□□□□□ -0.76
TMEM39A-201ENST00000319172 ANGEL2Q5VTE6 544 aaKnown RBP10.32□□□□□ -0.76
TMEM39A-201ENST00000319172 GLG1Q92896 1179 aa10.32□□□□□ -0.76
TMEM39A-201ENST00000319172 GJA10Q969M2 543 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms