RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 WNT10BO00744 389 aa14.72□□□□□ -0.05
CPNE1-201ENST00000317677 TRIM66O15016 1216 aa14.72□□□□□ -0.05
CPNE1-201ENST00000317677 EDIL3O43854 480 aa14.72□□□□□ -0.05
CPNE1-201ENST00000317677 BMP15O95972 392 aa14.72□□□□□ -0.05
CPNE1-201ENST00000317677 PRR29P0C7W0 189 aa14.72□□□□□ -0.05
CPNE1-201ENST00000317677 SARM1Q6SZW1 724 aa14.72□□□□□ -0.05
CPNE1-201ENST00000317677 SYMPKQ92797 1274 aaKnown RBP14.72□□□□□ -0.05
CPNE1-201ENST00000317677 FERMT2Q96AC1 680 aa14.72□□□□□ -0.05
CPNE1-201ENST00000317677 TRIM5Q9C035 493 aa14.72□□□□□ -0.05
CPNE1-201ENST00000317677 TMEM60Q9H2L4 133 aa14.72□□□□□ -0.05
CPNE1-201ENST00000317677 VEZTQ9HBM0 779 aa14.72□□□□□ -0.05
CPNE1-201ENST00000317677 TMEM260Q9NX78 707 aa14.72□□□□□ -0.05
CPNE1-201ENST00000317677 TMOD2Q9NZR1 351 aa14.72□□□□□ -0.05
CPNE1-201ENST00000317677 CCDC194A0A1B0GVG4 234 aa14.71□□□□□ -0.05
CPNE1-201ENST00000317677 VWA3AA6NCI4 1184 aa14.71□□□□□ -0.05
CPNE1-201ENST00000317677 MAGEA9P43362 315 aa14.71□□□□□ -0.05
CPNE1-201ENST00000317677 GPATCH4Q5T3I0 446 aaKnown RBP14.71□□□□□ -0.05
CPNE1-201ENST00000317677 SWT1Q5T5J6 900 aaKnown RBP14.71□□□□□ -0.05
CPNE1-201ENST00000317677 SLFN13Q68D06 897 aa14.71□□□□□ -0.05
CPNE1-201ENST00000317677 GRAMD1CQ8IYS0 662 aa14.71□□□□□ -0.05
CPNE1-201ENST00000317677 PDILTQ8N807 584 aa14.71□□□□□ -0.05
CPNE1-201ENST00000317677 SMC1BQ8NDV3 1235 aa14.71□□□□□ -0.05
CPNE1-201ENST00000317677 EXOC4Q96A65 974 aa14.71□□□□□ -0.05
CPNE1-201ENST00000317677 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.71□□□□□ -0.059e-8■■■■■ 116.8
CPNE1-201ENST00000317677 SCAF8Q9UPN6 1271 aaKnown RBP14.71□□□□□ -0.05
CPNE1-201ENST00000317677 RRP15Q9Y3B9 282 aaKnown RBP14.71□□□□□ -0.05
CPNE1-201ENST00000317677 PNMA6FA0A0J9YX94 578 aa14.71□□□□□ -0.06
CPNE1-201ENST00000317677 TPM1P09493 284 aa14.71□□□□□ -0.06
CPNE1-201ENST00000317677 NLRP12P59046 1061 aa14.71□□□□□ -0.06
CPNE1-201ENST00000317677 FKBP1CQ5VVH2 108 aa14.71□□□□□ -0.06
CPNE1-201ENST00000317677 ISM2Q6H9L7 571 aa14.71□□□□□ -0.06
CPNE1-201ENST00000317677 TMCO3Q6UWJ1 677 aa14.71□□□□□ -0.06
CPNE1-201ENST00000317677 CCAR2Q8N163 923 aaKnown RBP14.71□□□□□ -0.06
CPNE1-201ENST00000317677 CNNM3Q8NE01 707 aa14.71□□□□□ -0.06
CPNE1-201ENST00000317677 DCAF4Q8WV16 495 aa14.71□□□□□ -0.06
CPNE1-201ENST00000317677 SMARCE1Q969G3 411 aa14.71□□□□□ -0.06
CPNE1-201ENST00000317677 MRFAP1L1Q96HT8 127 aa14.71□□□□□ -0.06
CPNE1-201ENST00000317677 NUP88Q99567 741 aaPredicted RBP14.71□□□□□ -0.06
CPNE1-201ENST00000317677 C6orf50Q9HD87 102 aa14.71□□□□□ -0.06
CPNE1-201ENST00000317677 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.71□□□□□ -0.06
CPNE1-201ENST00000317677 LCMT1Q9UIC8 334 aa14.71□□□□□ -0.06
CPNE1-201ENST00000317677 HERC5Q9UII4 1024 aaKnown RBP14.71□□□□□ -0.06
CPNE1-201ENST00000317677 CEP83Q9Y592 693 aa14.71□□□□□ -0.06
CPNE1-201ENST00000317677 ATAD5Q96QE3 1844 aa14.7□□□□□ -0.06
CPNE1-201ENST00000317677 F5H6K3 240 aa14.7□□□□□ -0.06
CPNE1-201ENST00000317677 hCG_1984214I3L0E3 225 aa14.7□□□□□ -0.06
CPNE1-201ENST00000317677 NDUFB10O96000 172 aa14.7□□□□□ -0.06
CPNE1-201ENST00000317677 CCDC172P0C7W6 258 aa14.7□□□□□ -0.06
CPNE1-201ENST00000317677 APLP1P51693 650 aa14.7□□□□□ -0.06
CPNE1-201ENST00000317677 ZNF280AP59817 542 aaPredicted RBP14.7□□□□□ -0.06
CPNE1-201ENST00000317677 KLRC3Q07444 240 aa14.7□□□□□ -0.06
CPNE1-201ENST00000317677 KIAA1755Q5JYT7 1200 aa14.7□□□□□ -0.06
CPNE1-201ENST00000317677 RBM26Q5T8P6 1007 aaKnown RBP14.7□□□□□ -0.06
CPNE1-201ENST00000317677 SUGP1Q8IWZ8 645 aaKnown RBP14.7□□□□□ -0.06
CPNE1-201ENST00000317677 ELOA2Q8IYF1 753 aaPredicted RBP14.7□□□□□ -0.06
CPNE1-201ENST00000317677 ZNF713Q8N859 430 aaPredicted RBP14.7□□□□□ -0.06
CPNE1-201ENST00000317677 CCDC12Q8WUD4 166 aaPredicted RBP14.7□□□□□ -0.06
CPNE1-201ENST00000317677 MYOZ2Q9NPC6 264 aa14.7□□□□□ -0.06
CPNE1-201ENST00000317677 BIN2Q9UBW5 565 aaPredicted RBP14.7□□□□□ -0.06
CPNE1-201ENST00000317677 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.7□□□□□ -0.06
CPNE1-201ENST00000317677 PCDHA5Q9Y5H7 936 aa14.7□□□□□ -0.06
CPNE1-201ENST00000317677 SCN4AP35499 1836 aa14.69□□□□□ -0.06
CPNE1-201ENST00000317677 IQCA1LA6NCM1 817 aa14.69□□□□□ -0.06
CPNE1-201ENST00000317677 BMP6P22004 513 aa14.69□□□□□ -0.06
CPNE1-201ENST00000317677 GSCP56915 257 aaPredicted RBP14.69□□□□□ -0.06
CPNE1-201ENST00000317677 JAKMIP3Q5VZ66 844 aa14.69□□□□□ -0.06
CPNE1-201ENST00000317677 KRT25Q7Z3Z0 450 aa14.69□□□□□ -0.06
CPNE1-201ENST00000317677 GMCL1P1Q8NEA9 526 aa14.69□□□□□ -0.06
CPNE1-201ENST00000317677 MYH7BA7E2Y1 1941 aa14.69□□□□□ -0.06
CPNE1-201ENST00000317677 ZBTB5O15062 677 aa14.69□□□□□ -0.06
CPNE1-201ENST00000317677 RPS6KA5O75582 802 aa14.69□□□□□ -0.06
CPNE1-201ENST00000317677 DDNO94850 711 aaPredicted RBP14.69□□□□□ -0.06
CPNE1-201ENST00000317677 IVLP07476 585 aa14.69□□□□□ -0.06
CPNE1-201ENST00000317677 GNA11P29992 359 aa14.69□□□□□ -0.06
CPNE1-201ENST00000317677 ECE1P42892 770 aa14.69□□□□□ -0.06
CPNE1-201ENST00000317677 ERCC6LQ2NKX8 1250 aa14.69□□□□□ -0.06
CPNE1-201ENST00000317677 FAM83AQ86UY5 434 aa14.69□□□□□ -0.06
CPNE1-201ENST00000317677 ACER1Q8TDN7 264 aa14.69□□□□□ -0.06
CPNE1-201ENST00000317677 ASTN2O75129 1339 aaPredicted RBP14.69□□□□□ -0.06
CPNE1-201ENST00000317677 RAD21O60216 631 aa14.68□□□□□ -0.06
CPNE1-201ENST00000317677 SKILP12757 684 aa14.68□□□□□ -0.06
CPNE1-201ENST00000317677 SLC1A4P43007 532 aa14.68□□□□□ -0.06
CPNE1-201ENST00000317677 KCNJ6P48051 423 aa14.68□□□□□ -0.06
CPNE1-201ENST00000317677 NONOQ15233 471 aaKnown RBP eCLIP14.68□□□□□ -0.06
CPNE1-201ENST00000317677 E2F4Q16254 413 aa14.68□□□□□ -0.06
CPNE1-201ENST00000317677 QRICH1Q2TAL8 776 aa14.68□□□□□ -0.06
CPNE1-201ENST00000317677 CCDC144BQ3MJ40 725 aa14.68□□□□□ -0.06
CPNE1-201ENST00000317677 TTC31Q49AM3 519 aaPredicted RBP14.68□□□□□ -0.06
CPNE1-201ENST00000317677 ARL6IP4Q66PJ3 421 aaKnown RBP14.68□□□□□ -0.06
CPNE1-201ENST00000317677 MIGA2Q7L4E1 593 aa14.68□□□□□ -0.06
CPNE1-201ENST00000317677 SH3RF1Q7Z6J0 888 aa14.68□□□□□ -0.06
CPNE1-201ENST00000317677 CEP57L1Q8IYX8 460 aa14.68□□□□□ -0.06
CPNE1-201ENST00000317677 AOPEPQ8N6M6 819 aa14.68□□□□□ -0.06
CPNE1-201ENST00000317677 CEP120Q8N960 986 aa14.68□□□□□ -0.06
CPNE1-201ENST00000317677 DHX58Q96C10 678 aa14.68□□□□□ -0.06
CPNE1-201ENST00000317677 SMCHD1A6NHR9 2005 aa14.68□□□□□ -0.06
CPNE1-201ENST00000317677 USP27XA6NNY8 438 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 FZD9O00144 591 aa14.67□□□□□ -0.06
CPNE1-201ENST00000317677 SARSP49591 514 aaKnown RBP14.67□□□□□ -0.06
CPNE1-201ENST00000317677 CLK2P49760 499 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms