RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 SHHQ15465 462 aa19.49■□□□□ 0.71
TRAPPC1-201ENST00000303731 KIAA1211Q6ZU35 1233 aa19.49■□□□□ 0.71
TRAPPC1-201ENST00000303731 MTMR10Q9NXD2 777 aa19.49■□□□□ 0.71
TRAPPC1-201ENST00000303731 MYH6P13533 1939 aa19.49■□□□□ 0.71
TRAPPC1-201ENST00000303731 DYNC1LI2O43237 492 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC1-201ENST00000303731 PARP1P09874 1014 aaKnown RBP19.48■□□□□ 0.71
TRAPPC1-201ENST00000303731 GOLGA8HP0CJ92 632 aa19.48■□□□□ 0.71
TRAPPC1-201ENST00000303731 RPS6P62753 249 aaKnown RBP19.48■□□□□ 0.71
TRAPPC1-201ENST00000303731 DUSP28Q4G0W2 176 aa19.48■□□□□ 0.71
TRAPPC1-201ENST00000303731 EEPD1Q7L9B9 569 aa19.48■□□□□ 0.71
TRAPPC1-201ENST00000303731 TBX21Q9UL17 535 aa19.48■□□□□ 0.71
TRAPPC1-201ENST00000303731 STXBP5LQ9Y2K9 1186 aa19.48■□□□□ 0.71
TRAPPC1-201ENST00000303731 U3KPZ7 1027 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC1-201ENST00000303731 COL6A3P12111 3177 aa19.48■□□□□ 0.71
TRAPPC1-201ENST00000303731 ABCB11O95342 1321 aa19.48■□□□□ 0.71
TRAPPC1-201ENST00000303731 RBM47A0AV96 593 aaKnown RBP19.47■□□□□ 0.71
TRAPPC1-201ENST00000303731 NKRFO15226 690 aaKnown RBP eCLIP19.47■□□□□ 0.71
TRAPPC1-201ENST00000303731 ITGB8P26012 769 aa19.47■□□□□ 0.71
TRAPPC1-201ENST00000303731 SMAD3P84022 425 aaKnown RBP19.47■□□□□ 0.71
TRAPPC1-201ENST00000303731 BEX3Q00994 111 aa19.47■□□□□ 0.71
TRAPPC1-201ENST00000303731 PDE4DQ08499 809 aa19.47■□□□□ 0.71
TRAPPC1-201ENST00000303731 CDC37Q16543 378 aaPredicted RBP19.47■□□□□ 0.71
TRAPPC1-201ENST00000303731 C9orf50Q5SZB4 431 aa19.47■□□□□ 0.71
TRAPPC1-201ENST00000303731 IFIT1BQ5T764 474 aaKnown RBP19.47■□□□□ 0.71
TRAPPC1-201ENST00000303731 SLC30A10Q6XR72 485 aa19.47■□□□□ 0.71
TRAPPC1-201ENST00000303731 SLC43A3Q8NBI5 491 aa19.47■□□□□ 0.71
TRAPPC1-201ENST00000303731 PDGFCQ9NRA1 345 aa19.47■□□□□ 0.71
TRAPPC1-201ENST00000303731 EDNRBP24530 442 aa19.46■□□□□ 0.71
TRAPPC1-201ENST00000303731 CPT1AP50416 773 aa19.46■□□□□ 0.71
TRAPPC1-201ENST00000303731 IRX5P78411 483 aaPredicted RBP19.46■□□□□ 0.71
TRAPPC1-201ENST00000303731 USH1GQ495M9 461 aa19.46■□□□□ 0.71
TRAPPC1-201ENST00000303731 BRDTQ58F21 947 aaPredicted RBP19.46■□□□□ 0.71
TRAPPC1-201ENST00000303731 ZNF697Q5TEC3 545 aa19.46■□□□□ 0.71
TRAPPC1-201ENST00000303731 MFSD5Q6N075 450 aa19.46■□□□□ 0.71
TRAPPC1-201ENST00000303731 CXCL17Q6UXB2 119 aa19.46■□□□□ 0.71
TRAPPC1-201ENST00000303731 Q7L0L9 218 aa19.46■□□□□ 0.71
TRAPPC1-201ENST00000303731 MCF2L2Q86YR7 1114 aa19.46■□□□□ 0.71
TRAPPC1-201ENST00000303731 FAM126BQ8IXS8 530 aa19.46■□□□□ 0.71
TRAPPC1-201ENST00000303731 ADGRF4Q8IZF3 695 aa19.46■□□□□ 0.71
TRAPPC1-201ENST00000303731 PURBQ96QR8 312 aaKnown RBP19.46■□□□□ 0.71
TRAPPC1-201ENST00000303731 WDR11Q9BZH6 1224 aa19.46■□□□□ 0.71
TRAPPC1-201ENST00000303731 UBA5Q9GZZ9 404 aa19.46■□□□□ 0.71
TRAPPC1-201ENST00000303731 POLR3EQ9NVU0 708 aa19.46■□□□□ 0.71
TRAPPC1-201ENST00000303731 CHMLP26374 656 aa19.45■□□□□ 0.7
TRAPPC1-201ENST00000303731 PPIGQ13427 754 aaKnown RBP eCLIP19.45■□□□□ 0.7
TRAPPC1-201ENST00000303731 ITGA7Q13683 1181 aa19.45■□□□□ 0.7
TRAPPC1-201ENST00000303731 TMEM199Q8N511 208 aa19.45■□□□□ 0.7
TRAPPC1-201ENST00000303731 SCFD2Q8WU76 684 aa19.45■□□□□ 0.7
TRAPPC1-201ENST00000303731 RNPC3Q96LT9 517 aaKnown RBP19.45■□□□□ 0.7
TRAPPC1-201ENST00000303731 IL25Q9H293 177 aa19.45■□□□□ 0.7
TRAPPC1-201ENST00000303731 MRPL11Q9Y3B7 192 aaKnown RBP19.45■□□□□ 0.7
TRAPPC1-201ENST00000303731 DHX16O60231 1041 aaKnown RBP19.44■□□□□ 0.7
TRAPPC1-201ENST00000303731 CD4P01730 458 aa19.44■□□□□ 0.7
TRAPPC1-201ENST00000303731 PPP2R5BQ15173 497 aa19.44■□□□□ 0.7
TRAPPC1-201ENST00000303731 DDX49Q9Y6V7 483 aaKnown RBP19.44■□□□□ 0.7
TRAPPC1-201ENST00000303731 TMEM265A0A087WTH1 108 aa19.43■□□□□ 0.7
TRAPPC1-201ENST00000303731 ERICH2A1L162 156 aa19.43■□□□□ 0.7
TRAPPC1-201ENST00000303731 TRAF1Q13077 416 aa19.43■□□□□ 0.7
TRAPPC1-201ENST00000303731 SART3Q15020 963 aaKnown RBP19.43■□□□□ 0.7
TRAPPC1-201ENST00000303731 SEC23AQ15436 765 aa19.43■□□□□ 0.7
TRAPPC1-201ENST00000303731 QRICH1Q2TAL8 776 aa19.43■□□□□ 0.7
TRAPPC1-201ENST00000303731 RALYLQ86SE5 291 aaKnown RBP19.43■□□□□ 0.7
TRAPPC1-201ENST00000303731 FBXO11Q86XK2 927 aa19.43■□□□□ 0.7
TRAPPC1-201ENST00000303731 CPVLQ9H3G5 476 aa19.43■□□□□ 0.7
TRAPPC1-201ENST00000303731 SGSM2O43147 1006 aa19.42■□□□□ 0.7
TRAPPC1-201ENST00000303731 KPNA6O60684 536 aa19.42■□□□□ 0.7
TRAPPC1-201ENST00000303731 TTLL4Q14679 1199 aa19.42■□□□□ 0.7
TRAPPC1-201ENST00000303731 NSUN6Q8TEA1 469 aaKnown RBP19.42■□□□□ 0.7
TRAPPC1-201ENST00000303731 IWS1Q96ST2 819 aa19.42■□□□□ 0.7
TRAPPC1-201ENST00000303731 AMNQ9BXJ7 453 aa19.42■□□□□ 0.7
TRAPPC1-201ENST00000303731 JMJD4Q9H9V9 463 aa19.42■□□□□ 0.7
TRAPPC1-201ENST00000303731 GPHNQ9NQX3 736 aaPredicted RBP19.42■□□□□ 0.7
TRAPPC1-201ENST00000303731 MAP3K20Q9NYL2 800 aaKnown RBP19.42■□□□□ 0.7
TRAPPC1-201ENST00000303731 CYP21A2P08686 494 aa19.41■□□□□ 0.7
TRAPPC1-201ENST00000303731 EPHB4P54760 987 aa19.41■□□□□ 0.7
TRAPPC1-201ENST00000303731 IRX6P78412 446 aaPredicted RBP19.41■□□□□ 0.7
TRAPPC1-201ENST00000303731 PSRC1Q6PGN9 363 aaPredicted RBP19.41■□□□□ 0.7
TRAPPC1-201ENST00000303731 SAMD3Q8N6K7 520 aa19.41■□□□□ 0.7
TRAPPC1-201ENST00000303731 SLC17A8Q8NDX2 589 aa19.41■□□□□ 0.7
TRAPPC1-201ENST00000303731 OR6J1Q8NGC5 347 aa19.41■□□□□ 0.7
TRAPPC1-201ENST00000303731 NCOA7Q8NI08 942 aa19.41■□□□□ 0.7
TRAPPC1-201ENST00000303731 KLRF2D3W0D1 207 aa19.4■□□□□ 0.7
TRAPPC1-201ENST00000303731 SUPT20HL2P0C7V6 817 aa19.4■□□□□ 0.7
TRAPPC1-201ENST00000303731 CYB5R4Q7L1T6 521 aa19.4■□□□□ 0.7
TRAPPC1-201ENST00000303731 SYTL5Q8TDW5 730 aaPredicted RBP19.4■□□□□ 0.7
TRAPPC1-201ENST00000303731 MTG1Q9BT17 334 aaPredicted RBP19.4■□□□□ 0.7
TRAPPC1-201ENST00000303731 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC1-201ENST00000303731 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC1-201ENST00000303731 PALM3A6NDB9 673 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC1-201ENST00000303731 A6NJR5 290 aa19.39■□□□□ 0.69
TRAPPC1-201ENST00000303731 IFIT3O14879 490 aaKnown RBP19.39■□□□□ 0.69
TRAPPC1-201ENST00000303731 ZBTB5O15062 677 aa19.39■□□□□ 0.69
TRAPPC1-201ENST00000303731 TXNP10599 105 aaKnown RBP19.39■□□□□ 0.69
TRAPPC1-201ENST00000303731 PURAQ00577 322 aaKnown RBP19.39■□□□□ 0.69
TRAPPC1-201ENST00000303731 PTH1RQ03431 593 aa19.39■□□□□ 0.69
TRAPPC1-201ENST00000303731 STXBP2Q15833 593 aa19.39■□□□□ 0.69
TRAPPC1-201ENST00000303731 MTMR8Q96EF0 704 aa19.39■□□□□ 0.69
TRAPPC1-201ENST00000303731 RMDN3Q96TC7 470 aa19.39■□□□□ 0.69
TRAPPC1-201ENST00000303731 PPP1R12CQ9BZL4 782 aa19.39■□□□□ 0.69
TRAPPC1-201ENST00000303731 MTIF3Q9H2K0 278 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms