RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 MCM3APO60318 1980 aa21.32■■□□□ 1
TMEM88-201ENST00000301599 A0A0U1RQG5 324 aaPredicted RBP21.31■■□□□ 1
TMEM88-201ENST00000301599 ARVCFO00192 962 aa21.31■■□□□ 1
TMEM88-201ENST00000301599 CABYRO75952 493 aa21.31■■□□□ 1
TMEM88-201ENST00000301599 BEX3Q00994 111 aa21.31■■□□□ 1
TMEM88-201ENST00000301599 FSCN1Q16658 493 aaKnown RBP21.31■■□□□ 1
TMEM88-201ENST00000301599 USH1GQ495M9 461 aa21.31■■□□□ 1
TMEM88-201ENST00000301599 TLK2Q86UE8 772 aa21.31■■□□□ 1
TMEM88-201ENST00000301599 FBXO16Q8IX29 292 aaPredicted RBP21.31■■□□□ 1
TMEM88-201ENST00000301599 DNERQ8NFT8 737 aa21.31■■□□□ 1
TMEM88-201ENST00000301599 VAT1LQ9HCJ6 419 aa21.31■■□□□ 1
TMEM88-201ENST00000301599 SZT2Q5T011 3432 aa21.3■■□□□ 1
TMEM88-201ENST00000301599 SGSM2O43147 1006 aa21.3■■□□□ 1
TMEM88-201ENST00000301599 DHX16O60231 1041 aaKnown RBP21.3■■□□□ 1
TMEM88-201ENST00000301599 CYP21A2P08686 494 aa21.3■■□□□ 1
TMEM88-201ENST00000301599 PDE4DQ08499 809 aa21.3■■□□□ 1
TMEM88-201ENST00000301599 SHHQ15465 462 aa21.3■■□□□ 1
TMEM88-201ENST00000301599 CDC37Q16543 378 aaPredicted RBP21.3■■□□□ 1
TMEM88-201ENST00000301599 SLC30A10Q6XR72 485 aa21.3■■□□□ 1
TMEM88-201ENST00000301599 CYB5R4Q7L1T6 521 aa21.3■■□□□ 1
TMEM88-201ENST00000301599 DEFB123Q8N688 67 aa21.3■■□□□ 1
TMEM88-201ENST00000301599 ABCB11O95342 1321 aa21.29■■□□□ 1
TMEM88-201ENST00000301599 ITGB8P26012 769 aa21.29■■□□□ 1
TMEM88-201ENST00000301599 SEC23AQ15436 765 aa21.29■■□□□ 1
TMEM88-201ENST00000301599 DUSP28Q4G0W2 176 aa21.29■■□□□ 1
TMEM88-201ENST00000301599 MCF2L2Q86YR7 1114 aa21.29■■□□□ 1
TMEM88-201ENST00000301599 SEZ6LQ9BYH1 1024 aa21.29■■□□□ 1
TMEM88-201ENST00000301599 WDR11Q9BZH6 1224 aa21.29■■□□□ 1
TMEM88-201ENST00000301599 JMJD4Q9H9V9 463 aa21.29■■□□□ 1
TMEM88-201ENST00000301599 RBM47A0AV96 593 aaKnown RBP21.28■■□□□ 1
TMEM88-201ENST00000301599 TLR3O15455 904 aaKnown RBP21.28■■□□□ 1
TMEM88-201ENST00000301599 CXCL17Q6UXB2 119 aa21.28■■□□□ 1
TMEM88-201ENST00000301599 FBXO11Q86XK2 927 aa21.28■■□□□ 1
TMEM88-201ENST00000301599 MAP4K1Q92918 833 aa21.28■■□□□ 1
TMEM88-201ENST00000301599 MRPL11Q9Y3B7 192 aaKnown RBP21.28■■□□□ 1
TMEM88-201ENST00000301599 LAMA4Q16363 1823 aa21.27■■□□□ 1
TMEM88-201ENST00000301599 ERICH2A1L162 156 aa21.27■■□□□ 1
TMEM88-201ENST00000301599 IFIT3O14879 490 aaKnown RBP21.27■■□□□ 1
TMEM88-201ENST00000301599 TIMP1P01033 207 aa21.27■■□□□ 1
TMEM88-201ENST00000301599 QRICH1Q2TAL8 776 aa21.27■■□□□ 1
TMEM88-201ENST00000301599 C9orf50Q5SZB4 431 aa21.27■■□□□ 1
TMEM88-201ENST00000301599 TMEM63BQ5T3F8 832 aa21.27■■□□□ 1
TMEM88-201ENST00000301599 RALYLQ86SE5 291 aaKnown RBP21.27■■□□□ 1
TMEM88-201ENST00000301599 NCOA7Q8NI08 942 aa21.27■■□□□ 1
TMEM88-201ENST00000301599 KLRF2D3W0D1 207 aa21.26■□□□□ 0.99
TMEM88-201ENST00000301599 E7EWF7 191 aa21.26■□□□□ 0.99
TMEM88-201ENST00000301599 EDNRBP24530 442 aa21.26■□□□□ 0.99
TMEM88-201ENST00000301599 FPGSQ05932 587 aa21.26■□□□□ 0.99
TMEM88-201ENST00000301599 FAM109BQ6ICB4 259 aaPredicted RBP21.26■□□□□ 0.99
TMEM88-201ENST00000301599 STAG2Q8N3U4 1231 aa21.26■□□□□ 0.99
TMEM88-201ENST00000301599 SLC43A3Q8NBI5 491 aa21.26■□□□□ 0.99
TMEM88-201ENST00000301599 TBC1D5Q92609 795 aa21.26■□□□□ 0.99
TMEM88-201ENST00000301599 TBX21Q9UL17 535 aa21.26■□□□□ 0.99
TMEM88-201ENST00000301599 NKRFO15226 690 aaKnown RBP eCLIP21.25■□□□□ 0.99
TMEM88-201ENST00000301599 ITGA7Q13683 1181 aa21.25■□□□□ 0.99
TMEM88-201ENST00000301599 SART3Q15020 963 aaKnown RBP21.25■□□□□ 0.99
TMEM88-201ENST00000301599 NSUN6Q8TEA1 469 aaKnown RBP21.25■□□□□ 0.99
TMEM88-201ENST00000301599 SCFD2Q8WU76 684 aa21.25■□□□□ 0.99
TMEM88-201ENST00000301599 AMNQ9BXJ7 453 aa21.25■□□□□ 0.99
TMEM88-201ENST00000301599 MAD2L2Q9UI95 211 aa21.25■□□□□ 0.99
TMEM88-201ENST00000301599 LAMA3Q16787 3333 aa21.25■□□□□ 0.99
TMEM88-201ENST00000301599 PALM3A6NDB9 673 aaPredicted RBP21.24■□□□□ 0.99
TMEM88-201ENST00000301599 PTGS1P23219 599 aa21.24■□□□□ 0.99
TMEM88-201ENST00000301599 CPT1AP50416 773 aa21.24■□□□□ 0.99
TMEM88-201ENST00000301599 BRDTQ58F21 947 aaPredicted RBP21.24■□□□□ 0.99
TMEM88-201ENST00000301599 MFSD5Q6N075 450 aa21.24■□□□□ 0.99
TMEM88-201ENST00000301599 Q7L0L9 218 aa21.24■□□□□ 0.99
TMEM88-201ENST00000301599 FAM126BQ8IXS8 530 aa21.24■□□□□ 0.99
TMEM88-201ENST00000301599 SYTL5Q8TDW5 730 aaPredicted RBP21.24■□□□□ 0.99
TMEM88-201ENST00000301599 TAAR1Q96RJ0 339 aa21.24■□□□□ 0.99
TMEM88-201ENST00000301599 POLR3EQ9NVU0 708 aa21.24■□□□□ 0.99
TMEM88-201ENST00000301599 MTMR10Q9NXD2 777 aa21.24■□□□□ 0.99
TMEM88-201ENST00000301599 CD4P01730 458 aa21.23■□□□□ 0.99
TMEM88-201ENST00000301599 TRAF1Q13077 416 aa21.23■□□□□ 0.99
TMEM88-201ENST00000301599 WTAPQ15007 396 aa21.23■□□□□ 0.99
TMEM88-201ENST00000301599 IWS1Q96ST2 819 aa21.23■□□□□ 0.99
TMEM88-201ENST00000301599 GPHNQ9NQX3 736 aaPredicted RBP21.23■□□□□ 0.99
TMEM88-201ENST00000301599 RBM8AQ9Y5S9 174 aaKnown RBP21.23■□□□□ 0.99
TMEM88-201ENST00000301599 LTBP2Q14767 1821 aa21.22■□□□□ 0.99
TMEM88-201ENST00000301599 ZBTB5O15062 677 aa21.22■□□□□ 0.99
TMEM88-201ENST00000301599 TXNP10599 105 aaKnown RBP21.22■□□□□ 0.99
TMEM88-201ENST00000301599 EPHB4P54760 987 aa21.22■□□□□ 0.99
TMEM88-201ENST00000301599 TTLL4Q14679 1199 aa21.22■□□□□ 0.99
TMEM88-201ENST00000301599 PPP2R5BQ15173 497 aa21.22■□□□□ 0.99
TMEM88-201ENST00000301599 TMEM199Q8N511 208 aa21.22■□□□□ 0.99
TMEM88-201ENST00000301599 OR6J1Q8NGC5 347 aa21.22■□□□□ 0.99
TMEM88-201ENST00000301599 MTMR8Q96EF0 704 aa21.22■□□□□ 0.99
TMEM88-201ENST00000301599 RMDN3Q96TC7 470 aa21.22■□□□□ 0.99
TMEM88-201ENST00000301599 MAP3K20Q9NYL2 800 aaKnown RBP21.22■□□□□ 0.99
TMEM88-201ENST00000301599 TAF6LQ9Y6J9 622 aa21.22■□□□□ 0.99
TMEM88-201ENST00000301599 GRIN2DO15399 1336 aa21.22■□□□□ 0.99
TMEM88-201ENST00000301599 KPNA6O60684 536 aa21.21■□□□□ 0.99
TMEM88-201ENST00000301599 PPIGQ13427 754 aaKnown RBP eCLIP21.21■□□□□ 0.99
TMEM88-201ENST00000301599 GRM4Q14833 912 aa21.21■□□□□ 0.99
TMEM88-201ENST00000301599 STXBP2Q15833 593 aa21.21■□□□□ 0.99
TMEM88-201ENST00000301599 TMEM67Q5HYA8 995 aa21.21■□□□□ 0.99
TMEM88-201ENST00000301599 STOX1Q6ZVD7 989 aa21.21■□□□□ 0.99
TMEM88-201ENST00000301599 CHST3Q7LGC8 479 aa21.21■□□□□ 0.99
TMEM88-201ENST00000301599 RNPC3Q96LT9 517 aaKnown RBP21.21■□□□□ 0.99
TMEM88-201ENST00000301599 PCDHA1Q9Y5I3 950 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms