RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 SLFN12Q8IYM2 578 aa13.12□□□□□ -0.31
PCF11-201ENST00000298281 CFAP61Q8NHU2 1237 aa13.12□□□□□ -0.31
PCF11-201ENST00000298281 SBNO1A3KN83 1393 aa13.12□□□□□ -0.31
PCF11-201ENST00000298281 TMED1Q13445 227 aa13.12□□□□□ -0.31
PCF11-201ENST00000298281 KRT71Q3SY84 523 aa13.12□□□□□ -0.31
PCF11-201ENST00000298281 NSMFQ6X4W1 530 aa13.12□□□□□ -0.31
PCF11-201ENST00000298281 RINLQ6ZS11 566 aa13.12□□□□□ -0.31
PCF11-201ENST00000298281 NIM1KQ8IY84 436 aa13.12□□□□□ -0.31
PCF11-201ENST00000298281 TAGAPQ8N103 731 aa13.12□□□□□ -0.31
PCF11-201ENST00000298281 H7C1D1 291 aa13.12□□□□□ -0.31
PCF11-201ENST00000298281 HSPA8P11142 646 aaKnown RBP13.12□□□□□ -0.31
PCF11-201ENST00000298281 GABPB1Q06547 395 aaPredicted RBP13.12□□□□□ -0.31
PCF11-201ENST00000298281 TCP10Q12799 353 aa13.12□□□□□ -0.31
PCF11-201ENST00000298281 KLHL7Q8IXQ5 586 aa13.12□□□□□ -0.31
PCF11-201ENST00000298281 TRIM8Q9BZR9 551 aa13.12□□□□□ -0.31
PCF11-201ENST00000298281 RAPGEF6Q8TEU7 1601 aa13.12□□□□□ -0.31
PCF11-201ENST00000298281 ZSCAN9O15535 394 aaPredicted RBP13.11□□□□□ -0.31
PCF11-201ENST00000298281 SRGAP2BP0DMP2 458 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 PDXDC1Q6P996 788 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 SPATS2Q86XZ4 545 aaKnown RBP13.11□□□□□ -0.31
PCF11-201ENST00000298281 PIP4K2CQ8TBX8 421 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 ARHGEF9O43307 516 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 CFBP00751 764 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 STX1BP61266 288 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 WASHC5Q12768 1159 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 LRMPQ12912 555 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 RNF219Q5W0B1 726 aaPredicted RBP13.11□□□□□ -0.31
PCF11-201ENST00000298281 CCDC87Q9NVE4 849 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 HYOU1Q9Y4L1 999 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 ZBTB7BO15156 539 aaPredicted RBP13.11□□□□□ -0.31
PCF11-201ENST00000298281 DLGAP5Q15398 846 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 KRT26Q7Z3Y9 468 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 SPATA5Q8NB90 893 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 ABTB1Q969K4 478 aaPredicted RBP13.11□□□□□ -0.31
PCF11-201ENST00000298281 CARD6Q9BX69 1037 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 DISC1Q9NRI5 854 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 RGS16O15492 202 aaPredicted RBP13.11□□□□□ -0.31
PCF11-201ENST00000298281 PMS1P54277 932 aaKnown RBP13.11□□□□□ -0.31
PCF11-201ENST00000298281 KCNA1Q09470 495 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 DPY19L2Q6NUT2 758 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 FASTKD5Q7L8L6 764 aaKnown RBP13.11□□□□□ -0.31
PCF11-201ENST00000298281 TNNC2P02585 160 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 PMLP29590 882 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 IGBP1P78318 339 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 GRIN1Q05586 938 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 ASPHQ12797 758 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 AOC3Q16853 763 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 B4GALNT2Q8NHY0 566 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 ORC4O43929 436 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 FAM102BQ5T8I3 360 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 RNF207Q6ZRF8 634 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 RASEFQ8IZ41 740 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 DBNDD2Q9BQY9 259 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 BTG4Q9NY30 223 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 SAR1BQ9Y6B6 198 aa13.11□□□□□ -0.31
PCF11-201ENST00000298281 EPHB1P54762 984 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 TSPYL6Q8N831 410 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 OR8K1Q8NGG5 319 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 RAB20Q9NX57 234 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 PCP11498 1178 aaKnown RBP13.1□□□□□ -0.31
PCF11-201ENST00000298281 PRKCQQ04759 706 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 DCAF15Q66K64 600 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 KRT40Q6A162 431 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 SLC17A8Q8NDX2 589 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 TRPA1O75762 1119 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 TCF3P15923 654 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 RASIP1Q5U651 963 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 RUNDC3BQ96NL0 473 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 TRIM4Q9C037 500 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 PLEKHA4Q9H4M7 779 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 ELF1P32519 619 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 RCN2Q14257 317 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 SNX14Q9Y5W7 946 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 DDX42Q86XP3 938 aaKnown RBP eCLIP13.1□□□□□ -0.31
PCF11-201ENST00000298281 TRIML1Q8N9V2 468 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 MAP3K19Q56UN5 1328 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 TLR3O15455 904 aaKnown RBP13.1□□□□□ -0.31
PCF11-201ENST00000298281 SART1O43290 800 aaKnown RBP13.1□□□□□ -0.31
PCF11-201ENST00000298281 MAN1A2O60476 641 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 SKIP12755 728 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 TAB3Q8N5C8 712 aaPredicted RBP13.1□□□□□ -0.31
PCF11-201ENST00000298281 CABLES1Q8TDN4 633 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 PHF21AQ96BD5 680 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 CBX8Q9HC52 389 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 TAB2Q9NYJ8 693 aa13.1□□□□□ -0.31
PCF11-201ENST00000298281 MRPL11Q9Y3B7 192 aaKnown RBP13.1□□□□□ -0.31
PCF11-201ENST00000298281 ZNF445P59923 1031 aa13.09□□□□□ -0.31
PCF11-201ENST00000298281 FRA10AC1Q70Z53 315 aa13.09□□□□□ -0.31
PCF11-201ENST00000298281 METTL23Q86XA0 190 aa13.09□□□□□ -0.31
PCF11-201ENST00000298281 MCF2L2Q86YR7 1114 aa13.09□□□□□ -0.31
PCF11-201ENST00000298281 MYOCDQ8IZQ8 938 aa13.09□□□□□ -0.31
PCF11-201ENST00000298281 KLHDC4Q8TBB5 520 aa13.09□□□□□ -0.31
PCF11-201ENST00000298281 DACH2Q96NX9 599 aa13.09□□□□□ -0.31
PCF11-201ENST00000298281 C1orf112Q9NSG2 853 aa13.09□□□□□ -0.31
PCF11-201ENST00000298281 KIF17Q9P2E2 1029 aa13.09□□□□□ -0.31
PCF11-201ENST00000298281 TBX22Q9Y458 520 aa13.09□□□□□ -0.31
PCF11-201ENST00000298281 SYCE1LA8MT33 242 aa13.09□□□□□ -0.31
PCF11-201ENST00000298281 NEMP1O14524 444 aa13.09□□□□□ -0.31
PCF11-201ENST00000298281 OPTNQ96CV9 577 aa13.09□□□□□ -0.31
PCF11-201ENST00000298281 KLHL14Q9P2G3 628 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms