RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 FGBP02675 491 aa18.85■□□□□ 0.61
TMEM41A-201ENST00000296254 TOP1P11387 765 aaKnown RBP18.85■□□□□ 0.61
TMEM41A-201ENST00000296254 BAATQ14032 418 aaPredicted RBP18.85■□□□□ 0.61
TMEM41A-201ENST00000296254 OTOP2Q7RTS6 562 aa18.85■□□□□ 0.61
TMEM41A-201ENST00000296254 TMEM47Q9BQJ4 181 aa18.85■□□□□ 0.61
TMEM41A-201ENST00000296254 ALDH8A1Q9H2A2 487 aaPredicted RBP18.85■□□□□ 0.61
TMEM41A-201ENST00000296254 PRDM6Q9NQX0 595 aa18.85■□□□□ 0.61
TMEM41A-201ENST00000296254 HELLSQ9NRZ9 838 aa18.85■□□□□ 0.61
TMEM41A-201ENST00000296254 FRMPD2Q68DX3 1309 aaPredicted RBP18.84■□□□□ 0.61
TMEM41A-201ENST00000296254 A0A0D9SFI3 127 aa18.84■□□□□ 0.61
TMEM41A-201ENST00000296254 ADGRE1Q14246 886 aa18.84■□□□□ 0.61
TMEM41A-201ENST00000296254 SLC30A10Q6XR72 485 aa18.84■□□□□ 0.61
TMEM41A-201ENST00000296254 FAM227BQ96M60 508 aa18.84■□□□□ 0.61
TMEM41A-201ENST00000296254 NKX2-4Q9H2Z4 354 aa18.84■□□□□ 0.61
TMEM41A-201ENST00000296254 TOMM22Q9NS69 142 aa18.84■□□□□ 0.61
TMEM41A-201ENST00000296254 TCP11L1Q9NUJ3 509 aa18.84■□□□□ 0.61
TMEM41A-201ENST00000296254 YBX2Q9Y2T7 364 aaKnown RBP18.84■□□□□ 0.61
TMEM41A-201ENST00000296254 GBF1Q92538 1859 aa18.84■□□□□ 0.61
TMEM41A-201ENST00000296254 FGAP02671 866 aa18.83■□□□□ 0.6
TMEM41A-201ENST00000296254 PDHBP11177 359 aa18.83■□□□□ 0.6
TMEM41A-201ENST00000296254 CPT1AP50416 773 aa18.83■□□□□ 0.6
TMEM41A-201ENST00000296254 PURAQ00577 322 aaKnown RBP18.83■□□□□ 0.6
TMEM41A-201ENST00000296254 RRP12Q5JTH9 1297 aaKnown RBP18.83■□□□□ 0.6
TMEM41A-201ENST00000296254 CLEC4DQ8WXI8 215 aa18.83■□□□□ 0.6
TMEM41A-201ENST00000296254 VWCEQ96DN2 955 aa18.83■□□□□ 0.6
TMEM41A-201ENST00000296254 WDR11Q9BZH6 1224 aa18.83■□□□□ 0.6
TMEM41A-201ENST00000296254 SLC28A3Q9HAS3 691 aa18.83■□□□□ 0.6
TMEM41A-201ENST00000296254 TRMT13Q9NUP7 481 aaKnown RBP18.83■□□□□ 0.6
TMEM41A-201ENST00000296254 POLR3EQ9NVU0 708 aa18.83■□□□□ 0.6
TMEM41A-201ENST00000296254 MYO9BQ13459 2157 aa18.83■□□□□ 0.6
TMEM41A-201ENST00000296254 RBM47A0AV96 593 aaKnown RBP18.82■□□□□ 0.6
TMEM41A-201ENST00000296254 PTPDC1A2A3K4 754 aa18.82■□□□□ 0.6
TMEM41A-201ENST00000296254 PDE1AP54750 535 aa18.82■□□□□ 0.6
TMEM41A-201ENST00000296254 ANKRD45Q5TZF3 282 aa18.82■□□□□ 0.6
TMEM41A-201ENST00000296254 ATXN2LQ8WWM7 1075 aaKnown RBP18.82■□□□□ 0.6
TMEM41A-201ENST00000296254 PPM1EQ8WY54 764 aa18.82■□□□□ 0.6
TMEM41A-201ENST00000296254 SCLYQ96I15 445 aa18.82■□□□□ 0.6
TMEM41A-201ENST00000296254 GPCPD1Q9NPB8 672 aa18.82■□□□□ 0.6
TMEM41A-201ENST00000296254 THEGQ9P2T0 379 aa18.82■□□□□ 0.6
TMEM41A-201ENST00000296254 ZBTB47Q9UFB7 747 aaPredicted RBP18.82■□□□□ 0.6
TMEM41A-201ENST00000296254 PNMA2Q9UL42 364 aa18.82■□□□□ 0.6
TMEM41A-201ENST00000296254 TRANK1O15050 2925 aa18.82■□□□□ 0.6
TMEM41A-201ENST00000296254 TNKSO95271 1327 aa18.81■□□□□ 0.6
TMEM41A-201ENST00000296254 WDR19Q8NEZ3 1342 aa18.81■□□□□ 0.6
TMEM41A-201ENST00000296254 SCN10AQ9Y5Y9 1956 aa18.81■□□□□ 0.6
TMEM41A-201ENST00000296254 PFKMP08237 780 aa18.81■□□□□ 0.6
TMEM41A-201ENST00000296254 HSPD1P10809 573 aaKnown RBP18.81■□□□□ 0.6
TMEM41A-201ENST00000296254 EDNRBP24530 442 aa18.81■□□□□ 0.6
TMEM41A-201ENST00000296254 CALML3P27482 149 aa18.81■□□□□ 0.6
TMEM41A-201ENST00000296254 MCMDC2Q4G0Z9 681 aa18.81■□□□□ 0.6
TMEM41A-201ENST00000296254 RNF207Q6ZRF8 634 aa18.81■□□□□ 0.6
TMEM41A-201ENST00000296254 ZNF589Q86UQ0 364 aaPredicted RBP18.81■□□□□ 0.6
TMEM41A-201ENST00000296254 TICAM2Q86XR7 235 aa18.81■□□□□ 0.6
TMEM41A-201ENST00000296254 RPUSD2Q8IZ73 545 aaKnown RBP18.81■□□□□ 0.6
TMEM41A-201ENST00000296254 SLC4A7Q9Y6M7 1214 aa18.81■□□□□ 0.6
TMEM41A-201ENST00000296254 SUPT20HL2P0C7V6 817 aa18.8■□□□□ 0.6
TMEM41A-201ENST00000296254 SNHG28P0DPA3 235 aa18.8■□□□□ 0.6
TMEM41A-201ENST00000296254 CYP2C9P11712 490 aa18.8■□□□□ 0.6
TMEM41A-201ENST00000296254 RABGGTBP53611 331 aa18.8■□□□□ 0.6
TMEM41A-201ENST00000296254 RRP1P56182 461 aaKnown RBP18.8■□□□□ 0.6
TMEM41A-201ENST00000296254 RPS6P62753 249 aaKnown RBP18.8■□□□□ 0.6
TMEM41A-201ENST00000296254 ZNF543Q08ER8 600 aa18.8■□□□□ 0.6
TMEM41A-201ENST00000296254 PPP2R5BQ15173 497 aa18.8■□□□□ 0.6
TMEM41A-201ENST00000296254 PPP2R2DQ66LE6 453 aa18.8■□□□□ 0.6
TMEM41A-201ENST00000296254 OR6J1Q8NGC5 347 aa18.8■□□□□ 0.6
TMEM41A-201ENST00000296254 MTG1Q9BT17 334 aaPredicted RBP18.8■□□□□ 0.6
TMEM41A-201ENST00000296254 CCDC171Q6TFL3 1326 aa18.79■□□□□ 0.6
TMEM41A-201ENST00000296254 RAD50Q92878 1312 aa18.79■□□□□ 0.6
TMEM41A-201ENST00000296254 TNFRSF10AO00220 468 aa18.79■□□□□ 0.6
TMEM41A-201ENST00000296254 NKRFO15226 690 aaKnown RBP eCLIP18.79■□□□□ 0.6
TMEM41A-201ENST00000296254 MYL3P08590 195 aa18.79■□□□□ 0.6
TMEM41A-201ENST00000296254 PCP11498 1178 aaKnown RBP18.79■□□□□ 0.6
TMEM41A-201ENST00000296254 IGFBP4P22692 258 aa18.79■□□□□ 0.6
TMEM41A-201ENST00000296254 HAND2P61296 217 aa18.79■□□□□ 0.6
TMEM41A-201ENST00000296254 TBC1D10CQ8IV04 446 aa18.79■□□□□ 0.6
TMEM41A-201ENST00000296254 PCDHA11Q9Y5I1 949 aa18.79■□□□□ 0.6
TMEM41A-201ENST00000296254 TANC1Q9C0D5 1861 aa18.79■□□□□ 0.6
TMEM41A-201ENST00000296254 ZBBXA8MT70 800 aa18.78■□□□□ 0.6
TMEM41A-201ENST00000296254 ATP2A2P16615 1042 aaKnown RBP18.78■□□□□ 0.6
TMEM41A-201ENST00000296254 PDE4DQ08499 809 aa18.78■□□□□ 0.6
TMEM41A-201ENST00000296254 NMIQ13287 307 aaPredicted RBP18.78■□□□□ 0.6
TMEM41A-201ENST00000296254 HDAC1Q13547 482 aaPredicted RBP18.78■□□□□ 0.6
TMEM41A-201ENST00000296254 TTLL4Q14679 1199 aa18.78■□□□□ 0.6
TMEM41A-201ENST00000296254 BRDTQ58F21 947 aaPredicted RBP18.78■□□□□ 0.6
TMEM41A-201ENST00000296254 DNERQ8NFT8 737 aa18.78■□□□□ 0.6
TMEM41A-201ENST00000296254 SCFD2Q8WU76 684 aa18.78■□□□□ 0.6
TMEM41A-201ENST00000296254 TTC14Q96N46 770 aa18.78■□□□□ 0.6
TMEM41A-201ENST00000296254 ASB2Q96Q27 587 aa18.78■□□□□ 0.6
TMEM41A-201ENST00000296254 MPHOSPH6Q99547 160 aaKnown RBP18.78■□□□□ 0.6
TMEM41A-201ENST00000296254 GPHNQ9NQX3 736 aaPredicted RBP18.78■□□□□ 0.6
TMEM41A-201ENST00000296254 A6NJR5 290 aa18.77■□□□□ 0.6
TMEM41A-201ENST00000296254 MYOGP15173 224 aa18.77■□□□□ 0.6
TMEM41A-201ENST00000296254 CCDC85BQ15834 202 aaPredicted RBP18.77■□□□□ 0.6
TMEM41A-201ENST00000296254 NFRKBQ6P4R8 1299 aa18.77■□□□□ 0.6
TMEM41A-201ENST00000296254 NEDD4P46934 1319 aa18.76■□□□□ 0.59
TMEM41A-201ENST00000296254 PITPNM1O00562 1244 aa18.76■□□□□ 0.59
TMEM41A-201ENST00000296254 NBPF20Q3BBV1 942 aa18.76■□□□□ 0.59
TMEM41A-201ENST00000296254 FAM47CQ5HY64 1035 aa18.76■□□□□ 0.59
TMEM41A-201ENST00000296254 GPATCH4Q5T3I0 446 aaKnown RBP18.76■□□□□ 0.59
TMEM41A-201ENST00000296254 MFSD6Q6ZSS7 791 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms