RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 KCNQ4P56696 695 aa19.02■□□□□ 0.63
SPG7-201ENST00000268704 SIK1P57059 783 aa19.02■□□□□ 0.63
SPG7-201ENST00000268704 LETM2Q2VYF4 491 aa19.02■□□□□ 0.63
SPG7-201ENST00000268704 NFRKBQ6P4R8 1299 aa19.02■□□□□ 0.63
SPG7-201ENST00000268704 C2CD5Q86YS7 1000 aa19.02■□□□□ 0.63
SPG7-201ENST00000268704 CREG2Q8IUH2 290 aa19.02■□□□□ 0.63
SPG7-201ENST00000268704 ANKRD13CQ8N6S4 541 aa19.02■□□□□ 0.63
SPG7-201ENST00000268704 CCDC42Q96M95 316 aa19.02■□□□□ 0.63
SPG7-201ENST00000268704 SLC39A2Q9NP94 309 aa19.02■□□□□ 0.63
SPG7-201ENST00000268704 CCNE1P24864 410 aa19.01■□□□□ 0.63
SPG7-201ENST00000268704 VAV2P52735 878 aa19.01■□□□□ 0.63
SPG7-201ENST00000268704 TTC19Q6DKK2 380 aaPredicted RBP19.01■□□□□ 0.63
SPG7-201ENST00000268704 PURBQ96QR8 312 aaKnown RBP19.01■□□□□ 0.63
SPG7-201ENST00000268704 BSDC1Q9NW68 430 aaPredicted RBP19.01■□□□□ 0.63
SPG7-201ENST00000268704 ARHGAP20Q9P2F6 1191 aa19.01■□□□□ 0.63
SPG7-201ENST00000268704 MKRN1Q9UHC7 482 aaKnown RBP19.01■□□□□ 0.63
SPG7-201ENST00000268704 COL22A1Q8NFW1 1626 aaPredicted RBP19.01■□□□□ 0.63
SPG7-201ENST00000268704 SND1Q7KZF4 910 aaKnown RBP eCLIP19.01■□□□□ 0.63
SPG7-201ENST00000268704 TXNRD3Q86VQ6 643 aa19.01■□□□□ 0.63
SPG7-201ENST00000268704 DHTKD1Q96HY7 919 aaPredicted RBP19.01■□□□□ 0.63
SPG7-201ENST00000268704 CCSER1Q9C0I3 900 aa19.01■□□□□ 0.63
SPG7-201ENST00000268704 ARPP21Q9UBL0 812 aaPredicted RBP19.01■□□□□ 0.63
SPG7-201ENST00000268704 ROBO1Q9Y6N7 1651 aa19.01■□□□□ 0.63
SPG7-201ENST00000268704 STXBP3O00186 592 aa19■□□□□ 0.63
SPG7-201ENST00000268704 NCK2O43639 380 aa19■□□□□ 0.63
SPG7-201ENST00000268704 CCNT1O60563 726 aaKnown RBP19■□□□□ 0.63
SPG7-201ENST00000268704 MCM3P25205 808 aa19■□□□□ 0.63
SPG7-201ENST00000268704 PACS2Q86VP3 889 aa19■□□□□ 0.63
SPG7-201ENST00000268704 KIAA0895Q8NCT3 520 aa19■□□□□ 0.63
SPG7-201ENST00000268704 IFIH1Q9BYX4 1025 aaKnown RBP19■□□□□ 0.63
SPG7-201ENST00000268704 LAMB2P55268 1798 aa19■□□□□ 0.63
SPG7-201ENST00000268704 GOLGA6BA6NDN3 693 aa19■□□□□ 0.63
SPG7-201ENST00000268704 TECP42680 631 aa19■□□□□ 0.63
SPG7-201ENST00000268704 CCDC170Q8IYT3 715 aa19■□□□□ 0.63
SPG7-201ENST00000268704 SNX12Q9UMY4 172 aa19■□□□□ 0.63
SPG7-201ENST00000268704 STX8Q9UNK0 236 aa19■□□□□ 0.63
SPG7-201ENST00000268704 DNAJC21Q5F1R6 531 aaKnown RBP18.99■□□□□ 0.63
SPG7-201ENST00000268704 SEMA6BQ9H3T3 888 aa18.99■□□□□ 0.63
SPG7-201ENST00000268704 ATP8A2Q9NTI2 1148 aa18.99■□□□□ 0.63
SPG7-201ENST00000268704 ANO9A1A5B4 782 aa18.99■□□□□ 0.63
SPG7-201ENST00000268704 PPFIA4O75335 1185 aa18.99■□□□□ 0.63
SPG7-201ENST00000268704 SPA17Q15506 151 aa18.99■□□□□ 0.63
SPG7-201ENST00000268704 ZNF662Q6ZS27 426 aa18.99■□□□□ 0.63
SPG7-201ENST00000268704 FBXO33Q7Z6M2 555 aa18.99■□□□□ 0.63
SPG7-201ENST00000268704 RPGRIP1Q96KN7 1286 aa18.99■□□□□ 0.63
SPG7-201ENST00000268704 CASZ1Q86V15 1759 aa18.99■□□□□ 0.63
SPG7-201ENST00000268704 GOLGA6CA6NDK9 693 aa18.99■□□□□ 0.63
SPG7-201ENST00000268704 GOLGA6DP0CG33 693 aa18.99■□□□□ 0.63
SPG7-201ENST00000268704 AENQ8WTP8 325 aaKnown RBP18.99■□□□□ 0.63
SPG7-201ENST00000268704 NUP58Q9BVL2 599 aa18.99■□□□□ 0.63
SPG7-201ENST00000268704 GOLGA6AQ9NYA3 693 aa18.99■□□□□ 0.63
SPG7-201ENST00000268704 SALL4Q9UJQ4 1053 aa18.99■□□□□ 0.63
SPG7-201ENST00000268704 POLD4Q9HCU8 107 aa18.98■□□□□ 0.63
SPG7-201ENST00000268704 SH3GLB2Q9NR46 395 aa18.98■□□□□ 0.63
SPG7-201ENST00000268704 PCDHA13Q9Y5I0 950 aa18.98■□□□□ 0.63
SPG7-201ENST00000268704 EIF4A3P38919 411 aaKnown RBP18.98■□□□□ 0.63
SPG7-201ENST00000268704 KIF11P52732 1056 aa18.98■□□□□ 0.63
SPG7-201ENST00000268704 GRM4Q14833 912 aa18.98■□□□□ 0.63
SPG7-201ENST00000268704 CCDC155Q8N6L0 562 aa18.98■□□□□ 0.63
SPG7-201ENST00000268704 FAM76AQ8TAV0 307 aa18.98■□□□□ 0.63
SPG7-201ENST00000268704 SH2D4AQ9H788 454 aa18.98■□□□□ 0.63
SPG7-201ENST00000268704 TCP11L1Q9NUJ3 509 aa18.98■□□□□ 0.63
SPG7-201ENST00000268704 BARHL2Q9NY43 387 aa18.98■□□□□ 0.63
SPG7-201ENST00000268704 RREB1Q92766 1687 aa18.97■□□□□ 0.63
SPG7-201ENST00000268704 RETREG2Q8NC44 543 aa18.97■□□□□ 0.63
SPG7-201ENST00000268704 NOC3LQ8WTT2 800 aaKnown RBP18.97■□□□□ 0.63
SPG7-201ENST00000268704 MMRN2Q9H8L6 949 aa18.97■□□□□ 0.63
SPG7-201ENST00000268704 BICDL2A1A5D9 508 aa18.97■□□□□ 0.63
SPG7-201ENST00000268704 OR52Z1P0C646 297 aa18.97■□□□□ 0.63
SPG7-201ENST00000268704 MAGEA9P43362 315 aa18.97■□□□□ 0.63
SPG7-201ENST00000268704 DNA2P51530 1060 aa18.97■□□□□ 0.63
SPG7-201ENST00000268704 CORO7P57737 925 aa18.97■□□□□ 0.63
SPG7-201ENST00000268704 SPATA4Q8NEY3 305 aa18.97■□□□□ 0.63
SPG7-201ENST00000268704 ERGIC2Q96RQ1 377 aa18.97■□□□□ 0.63
SPG7-201ENST00000268704 DEF6Q9H4E7 631 aa18.97■□□□□ 0.63
SPG7-201ENST00000268704 MKNK2Q9HBH9 465 aa18.97■□□□□ 0.63
SPG7-201ENST00000268704 FAM184BQ9ULE4 1060 aa18.97■□□□□ 0.63
SPG7-201ENST00000268704 HIBADHP31937 336 aaKnown RBP18.97■□□□□ 0.63
SPG7-201ENST00000268704 NOP2P46087 812 aaKnown RBP18.97■□□□□ 0.63
SPG7-201ENST00000268704 DYMQ7RTS9 669 aa18.97■□□□□ 0.63
SPG7-201ENST00000268704 TMC4Q7Z404 712 aa18.97■□□□□ 0.63
SPG7-201ENST00000268704 ZSCAN29Q8IWY8 852 aaPredicted RBP18.97■□□□□ 0.63
SPG7-201ENST00000268704 TSEN2Q8NCE0 465 aaKnown RBP18.97■□□□□ 0.63
SPG7-201ENST00000268704 MMTAG2Q9BU76 263 aaKnown RBP18.97■□□□□ 0.63
SPG7-201ENST00000268704 JRKLQ9Y4A0 524 aa18.97■□□□□ 0.63
SPG7-201ENST00000268704 LOC102724159A0A0B4J2E5 919 aa18.96■□□□□ 0.63
SPG7-201ENST00000268704 TSPY3P0CV98 308 aa18.96■□□□□ 0.63
SPG7-201ENST00000268704 TSPY8P0CW00 308 aa18.96■□□□□ 0.63
SPG7-201ENST00000268704 CCT5P48643 541 aa18.96■□□□□ 0.63
SPG7-201ENST00000268704 NAPAP54920 295 aa18.96■□□□□ 0.63
SPG7-201ENST00000268704 PWP2Q15269 919 aaKnown RBP18.96■□□□□ 0.63
SPG7-201ENST00000268704 SBK1Q52WX2 424 aa18.96■□□□□ 0.63
SPG7-201ENST00000268704 DZIP1Q86YF9 867 aaKnown RBP18.96■□□□□ 0.63
SPG7-201ENST00000268704 GLIS3Q8NEA6 775 aa18.96■□□□□ 0.63
SPG7-201ENST00000268704 SH3RF3Q8TEJ3 882 aaPredicted RBP18.96■□□□□ 0.63
SPG7-201ENST00000268704 OSBPL9Q96SU4 736 aa18.96■□□□□ 0.63
SPG7-201ENST00000268704 LRRC53A6NM62 1247 aa18.96■□□□□ 0.63
SPG7-201ENST00000268704 BUB1O43683 1085 aa18.96■□□□□ 0.63
SPG7-201ENST00000268704 ZPR1O75312 459 aa18.96■□□□□ 0.63
SPG7-201ENST00000268704 MYL1P05976 194 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms