RNA–Protein interactions for RNA: ENST00000265956.8

GAPVD1-201, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-201ENST00000265956 KIAA0895Q8NCT3 520 aa8.4□□□□□ -1.06
GAPVD1-201ENST00000265956 ZNF507Q8TCN5 953 aa8.4□□□□□ -1.06
GAPVD1-201ENST00000265956 CCDC102AQ96A19 550 aa8.4□□□□□ -1.06
GAPVD1-201ENST00000265956 CCDC47Q96A33 483 aaKnown RBP8.4□□□□□ -1.06
GAPVD1-201ENST00000265956 CALML4Q96GE6 196 aa8.4□□□□□ -1.06
GAPVD1-201ENST00000265956 MMTAG2Q9BU76 263 aaKnown RBP8.4□□□□□ -1.06
GAPVD1-201ENST00000265956 TANGO6Q9C0B7 1094 aa8.4□□□□□ -1.06
GAPVD1-201ENST00000265956 THAP9Q9H5L6 903 aa8.4□□□□□ -1.06
GAPVD1-201ENST00000265956 MMRN2Q9H8L6 949 aa8.4□□□□□ -1.06
GAPVD1-201ENST00000265956 KANSL2Q9H9L4 492 aa8.4□□□□□ -1.06
GAPVD1-201ENST00000265956 NHEJ1Q9H9Q4 299 aaPredicted RBP8.4□□□□□ -1.06
GAPVD1-201ENST00000265956 ZNF287Q9HBT7 754 aa8.4□□□□□ -1.06
GAPVD1-201ENST00000265956 ZNHIT6Q9NWK9 470 aaKnown RBP8.4□□□□□ -1.06
GAPVD1-201ENST00000265956 VPS18Q9P253 973 aa8.4□□□□□ -1.06
GAPVD1-201ENST00000265956 LRWD1Q9UFC0 647 aa8.4□□□□□ -1.06
GAPVD1-201ENST00000265956 POLLQ9UGP5 575 aa8.4□□□□□ -1.06
GAPVD1-201ENST00000265956 PDS5AQ29RF7 1337 aaKnown RBP8.4□□□□□ -1.06
GAPVD1-201ENST00000265956 UTRNP46939 3433 aa8.4□□□□□ -1.06
GAPVD1-201ENST00000265956 LAMB2P55268 1798 aa8.4□□□□□ -1.06
GAPVD1-201ENST00000265956 RASSF10A6NK89 507 aa8.4□□□□□ -1.07
GAPVD1-201ENST00000265956 EPHB6O15197 1021 aa8.4□□□□□ -1.07
GAPVD1-201ENST00000265956 IPO7O95373 1038 aaKnown RBP8.4□□□□□ -1.07
GAPVD1-201ENST00000265956 LMAN1P49257 510 aa8.4□□□□□ -1.07
GAPVD1-201ENST00000265956 DNM2P50570 870 aa8.4□□□□□ -1.07
GAPVD1-201ENST00000265956 DNA2P51530 1060 aa8.4□□□□□ -1.07
GAPVD1-201ENST00000265956 CACNB1Q02641 598 aaPredicted RBP8.4□□□□□ -1.07
GAPVD1-201ENST00000265956 KCNB1Q14721 858 aa8.4□□□□□ -1.07
GAPVD1-201ENST00000265956 ENOX2Q16206 610 aaKnown RBP8.4□□□□□ -1.07
GAPVD1-201ENST00000265956 RC3H1Q5TC82 1133 aaKnown RBP8.4□□□□□ -1.07
GAPVD1-201ENST00000265956 C16orf86Q6ZW13 317 aa8.4□□□□□ -1.07
GAPVD1-201ENST00000265956 CAGE1Q8TC20 777 aa8.4□□□□□ -1.07
GAPVD1-201ENST00000265956 JAKMIP2Q96AA8 810 aa8.4□□□□□ -1.07
GAPVD1-201ENST00000265956 MMS19Q96T76 1030 aa8.4□□□□□ -1.07
GAPVD1-201ENST00000265956 LRRC4BQ9NT99 713 aa8.4□□□□□ -1.07
GAPVD1-201ENST00000265956 CAPN11Q9UMQ6 739 aa8.4□□□□□ -1.07
GAPVD1-201ENST00000265956 CCDC88AQ3V6T2 1871 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 MYMKA6NI61 221 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 FAM196BA6NMK8 535 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 ZBTB22O15209 634 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 AKR1B1P15121 316 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 CCNE1P24864 410 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 MATR3P43243 847 aaKnown RBP eCLIP8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 TNNT3P45378 269 aaPredicted RBP8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 PPP4CP60510 307 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 SKIDA1Q1XH10 827 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 CCDC96Q2M329 555 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 BEND6Q5SZJ8 279 aaPredicted RBP8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 FKBP15Q5T1M5 1219 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 TMED8Q6PL24 325 aaPredicted RBP8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 KCTD1Q719H9 257 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 SV2BQ7L1I2 683 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 KCNK18Q7Z418 384 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 C2CD5Q86YS7 1000 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 GSPT2Q8IYD1 628 aaKnown RBP8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 NEDD1Q8NHV4 660 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 ANKS1AQ92625 1134 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 SEMA6BQ9H3T3 888 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 CASZ1Q86V15 1759 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 WNK3Q9BYP7 1800 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 SRGNP10124 158 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 PDHBP11177 359 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 CXCR5P32302 372 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 CYP2C19P33261 490 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 CACNB3P54284 484 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 RHBDL3P58872 404 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 BRD3Q15059 726 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 DOK7Q18PE1 504 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 DAGLBQ8NCG7 672 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 SNX29Q8TEQ0 813 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 DHTKD1Q96HY7 919 aaPredicted RBP8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 CCDC42Q96M95 316 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 DNAJC7Q99615 494 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 SPZ1Q9BXG8 430 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 DEF6Q9H4E7 631 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 ZHX3Q9H4I2 956 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 USP21Q9UK80 565 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 KIAA1551Q9HCM1 1747 aa8.39□□□□□ -1.07
GAPVD1-201ENST00000265956 GPR75-ASB3A0A0A6YYF3 556 aa8.38□□□□□ -1.07
GAPVD1-201ENST00000265956 FAM170AA1A519 330 aa8.38□□□□□ -1.07
GAPVD1-201ENST00000265956 BICDL2A1A5D9 508 aa8.38□□□□□ -1.07
GAPVD1-201ENST00000265956 SERPINB2P05120 415 aa8.38□□□□□ -1.07
GAPVD1-201ENST00000265956 FECHP22830 423 aa8.38□□□□□ -1.07
GAPVD1-201ENST00000265956 ADCY7P51828 1080 aa8.38□□□□□ -1.07
GAPVD1-201ENST00000265956 HNRNPH2P55795 449 aaKnown RBP8.38□□□□□ -1.07
GAPVD1-201ENST00000265956 FAM193AP78312 1265 aa8.38□□□□□ -1.07
GAPVD1-201ENST00000265956 AMPD3Q01432 767 aa8.38□□□□□ -1.07
GAPVD1-201ENST00000265956 GRB10Q13322 594 aa8.38□□□□□ -1.07
GAPVD1-201ENST00000265956 SHROOM1Q2M3G4 852 aaPredicted RBP8.38□□□□□ -1.07
GAPVD1-201ENST00000265956 MIIPQ5JXC2 388 aa8.38□□□□□ -1.07
GAPVD1-201ENST00000265956 GALNT17Q6IS24 598 aa8.38□□□□□ -1.07
GAPVD1-201ENST00000265956 HDXQ7Z353 690 aa8.38□□□□□ -1.07
GAPVD1-201ENST00000265956 PLEKHA4Q9H4M7 779 aa8.38□□□□□ -1.07
GAPVD1-201ENST00000265956 HAUS4Q9H6D7 363 aa8.38□□□□□ -1.07
GAPVD1-201ENST00000265956 POLD4Q9HCU8 107 aa8.38□□□□□ -1.07
GAPVD1-201ENST00000265956 ADAM21Q9UKJ8 722 aa8.38□□□□□ -1.07
GAPVD1-201ENST00000265956 SAR1BQ9Y6B6 198 aa8.38□□□□□ -1.07
GAPVD1-201ENST00000265956 DLEC1Q9Y238 1755 aa8.38□□□□□ -1.07
GAPVD1-201ENST00000265956 LAD1O00515 517 aa8.38□□□□□ -1.07
GAPVD1-201ENST00000265956 KRT86O43790 486 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms